RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 CTNNAL1Q9UBT7 734 aa18.66■□□□□ 0.58
CTSA-204ENST00000372484 GMNCA6NCL1 334 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 GOLGA8MH3BSY2 632 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CHN1P15882 459 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 PTPN1P18031 435 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 THPOP40225 353 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 STAT4Q14765 748 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 KCNA10Q16322 511 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CA9Q16790 459 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CCDC142Q17RM4 750 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 PPP6R3Q5H9R7 873 aaPredicted RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 HP1BP3Q5SSJ5 553 aaPredicted RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 PIGZQ86VD9 579 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CPT1BQ92523 772 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 C11orf84Q9BUA3 381 aaPredicted RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 FAM107BQ9H098 131 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 CEP350Q5VT06 3117 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CLDN5O00501 218 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 FAM107AO95990 144 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 RPLP2P05387 115 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 ABHD2P08910 425 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 STIP1P31948 543 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 NKX3-2P78367 333 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 MGAT3Q09327 533 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 FASTKD3Q14CZ7 662 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 HIF1AQ16665 826 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 ERMARDQ5T6L9 678 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 B4GALNT4Q76KP1 1039 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 EXOC3L1Q86VI1 746 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 ZBED8Q8IZ13 594 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 TAB3Q8N5C8 712 aaPredicted RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 PLD5Q8N7P1 536 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 CENPIQ92674 756 aaPredicted RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 ARHGEF2Q92974 986 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 SENP8Q96LD8 212 aa18.65■□□□□ 0.58
CTSA-204ENST00000372484 AGO3Q9H9G7 860 aaKnown RBP18.65■□□□□ 0.58
CTSA-204ENST00000372484 A0A087WUV0 522 aaPredicted RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 ARL5CA6NH57 179 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 H7C0C1 242 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 GABRDO14764 452 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 APOL1O14791 398 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ALDH1A1P00352 501 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 FAM163BP0C2L3 166 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 NPR3P17342 541 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 CCND3P30281 292 aaPredicted RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 ATP5OP48047 213 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 CLCNKBP51801 687 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ATXN1P54253 815 aaKnown RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 BCAR1P56945 870 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ADIGQ0VDE8 80 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 PDIA2Q13087 525 aaKnown RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 EFHC1Q5JVL4 640 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 RPAINQ86UA6 219 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 VSIG1Q86XK7 387 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ZNF473Q8WTR7 871 aaKnown RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 CENPTQ96BT3 561 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ZNF670Q9BS34 389 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ADAM33Q9BZ11 813 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 MIOSQ9NXC5 875 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 DDX43Q9NXZ2 648 aaKnown RBP18.64■□□□□ 0.57
CTSA-204ENST00000372484 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.64■□□□□ 0.572e-6■■□□□ 12.2
CTSA-204ENST00000372484 HEY1Q9Y5J3 304 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 CDH16O75309 829 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 TGM2P21980 687 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 MDH1BQ5I0G3 518 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 ANKRD22Q5VYY1 191 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 PQLC3Q8N755 202 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 NAT8LQ8N9F0 302 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 PCDH19Q8TAB3 1148 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 FAM149B1Q96BN6 582 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 MED10Q9BTT4 135 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 GIT1Q9Y2X7 761 aa18.64■□□□□ 0.57
CTSA-204ENST00000372484 CASP8AP2Q9UKL3 1982 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 ALOX15BO15296 676 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 CAPN15O75808 1086 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 BEST1O76090 585 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 SCNN1GP51170 649 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 NRLP54845 237 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 BASP1P80723 227 aaKnown RBP18.63■□□□□ 0.57
CTSA-204ENST00000372484 SLC9A4Q6AI14 798 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 AGMOQ6ZNB7 445 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 XPO6Q96QU8 1125 aaKnown RBP18.63■□□□□ 0.57
CTSA-204ENST00000372484 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 DHX35Q9H5Z1 703 aaKnown RBP18.63■□□□□ 0.57
CTSA-204ENST00000372484 TBK1Q9UHD2 729 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 PADI3Q9ULW8 664 aa18.63■□□□□ 0.57
CTSA-204ENST00000372484 PRKAR2AP13861 404 aaKnown RBP18.62■□□□□ 0.57
CTSA-204ENST00000372484 CD52P31358 61 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 MATKP42679 507 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 ARL4CP56559 192 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 GAD2Q05329 585 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 DPYSL2Q16555 572 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 KIAA0319Q5VV43 1072 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 NDRG1Q92597 394 aaKnown RBP18.62■□□□□ 0.57
CTSA-204ENST00000372484 VPS37BQ9H9H4 285 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 INTS9Q9NV88 658 aaKnown RBP18.62■□□□□ 0.57
CTSA-204ENST00000372484 AP4E1Q9UPM8 1137 aa18.62■□□□□ 0.57
CTSA-204ENST00000372484 EXOC1LA0A1B0GW35 172 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms