RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 NUDCD3Q8IVD9 361 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ZNF606Q8WXB4 792 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ASIC4Q96FT7 647 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 SLC9A7Q96T83 725 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 GPR20Q99678 358 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 TRIM54Q9BYV2 358 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MUC3BQ9H195 1237 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 SIK3Q9Y2K2 1263 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 DFFAO00273 331 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 SNX2O60749 519 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 HNRNPCL1O60812 293 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ANXA9O76027 345 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ITGB5P18084 799 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ART3Q13508 389 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 RCN2Q14257 317 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NAA30Q147X3 362 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 GDF6Q6KF10 455 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 LRRC55Q6ZSA7 311 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NPAS4Q8IUM7 802 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 GSPT2Q8IYD1 628 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 KIAA0319LQ8IZA0 1049 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MCOLN2Q8IZK6 566 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 OR6P1Q8NGX9 317 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 USP13Q92995 863 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MS4A4AQ96JQ5 239 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 ATRNL1Q5VV63 1379 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 WDR91A4D1P6 747 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 CASQ2O14958 399 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 PPP1R37O75864 691 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 LMNAP02545 664 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 RRM1P23921 792 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MAGEA4P43358 317 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 SFSWAPQ12872 951 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NAA25Q14CX7 972 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 EPC2Q52LR7 807 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 TBC1D1Q86TI0 1168 aaPredicted RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 PDCD7Q8N8D1 485 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 TRIM51Q9BSJ1 452 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 MIR1-1HGQ9H1L0 117 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 WDCPQ9H6R7 721 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 XPO7Q9UIA9 1087 aaKnown RBP7.3□□□□□ -1.24
RAB5B-201ENST00000360299 USP20Q9Y2K6 914 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 PCDHB5Q9Y5E4 795 aa7.3□□□□□ -1.24
RAB5B-201ENST00000360299 NRAPQ86VF7 1730 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 CCDC22O60826 627 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 RECQL4O94761 1208 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 LUC7L3O95232 432 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 POLBP06746 335 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 CXCL8P10145 99 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SPRP35270 261 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MAGEA10P43363 369 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 IRF5Q13568 498 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 CDH18Q13634 790 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SLC39A12Q504Y0 691 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TTC23LQ6PF05 361 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ACOT1Q86TX2 421 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 UNC93AQ86WB7 457 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MYLK4Q86YV6 388 aaPredicted RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TMEM161BQ8NDZ6 487 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SERPINB12Q96P63 405 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 CDK5RAP1Q96SZ6 601 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ZBTB18Q99592 522 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MMTAG2Q9BU76 263 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 GOLPH3Q9H4A6 298 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TRABDQ9H4I3 376 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SUN2Q9UH99 717 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 CAPN6Q9Y6Q1 641 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TAF1P21675 1872 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 PER2O15055 1255 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ZBTB22O15209 634 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MAP3K7O43318 606 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ATP9AO75110 1047 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ZWINTO95229 277 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SPATA31C1P0DKV0 1188 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 HNRNPH3P31942 346 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 RASSF3Q86WH2 238 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TMEM86AQ8N2M4 240 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 EIF1ADQ8N9N8 165 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 NOA1Q8NC60 698 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TFB1MQ8WVM0 346 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 NDE1Q9NXR1 346 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 DOCK2Q92608 1830 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SMIM35A0A1B0GVV1 85 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 ETFBP38117 255 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SLC11A2P49281 568 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 DDI1Q8WTU0 396 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MAML1Q92585 1016 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 RMDN1Q96DB5 314 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 POP1Q99575 1024 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 BRD8Q9H0E9 1235 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 EPC1Q9H2F5 836 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 PABPC3Q9H361 631 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 MRPS17Q9Y2R5 130 aaKnown RBP7.29□□□□□ -1.24
RAB5B-201ENST00000360299 UMODL1Q5DID0 1318 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 COL1A2P08123 1366 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 TBC1D3BA6NDS4 549 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 BTNL10A8MVZ5 291 aa7.29□□□□□ -1.24
RAB5B-201ENST00000360299 SPECC1L-ADORA2AF8WAN1 911 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms