RNA–Protein interactions for RNA: ENST00000354828.7

GABPA-201, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 5,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-201ENST00000354828 CTIFO43310 598 aaKnown RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 ZNF500O60304 480 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 POLBP06746 335 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 PAEPP09466 180 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 TNFSF9P41273 254 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 CAPRIN1Q14444 709 aaKnown RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 EMBQ6PCB8 327 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 SERPINA13PQ6UXR4 307 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 NPAS4Q8IUM7 802 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 HAUS8Q9BT25 410 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 C11orf84Q9BUA3 381 aaPredicted RBP10.07□□□□□ -0.8
GABPA-201ENST00000354828 DNAJC18Q9H819 358 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 CD274Q9NZQ7 290 aa10.07□□□□□ -0.8
GABPA-201ENST00000354828 OR6C75A6NL08 312 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 SEC31AO94979 1220 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 ITGALP20701 1170 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 CHKAP35790 457 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 MAPK9P45984 424 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 RENBPP51606 427 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 TTLL9Q3SXZ7 439 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PPP4R4Q6NUP7 873 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 UNC93AQ86WB7 457 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 ZNF669Q96BR6 464 aaPredicted RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 TRIM45Q9H8W5 580 aaPredicted RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 TPX2Q9ULW0 747 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 HPSEQ9Y251 543 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 AAR2Q9Y312 384 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 CDY1Q9Y6F8 540 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PDZK1P1A8MUH7 402 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 F8VP50 259 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 IGSF6O95976 241 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 CCNE2O96020 404 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 DDX5P17844 614 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 CDC25CP30307 473 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PRKCQQ04759 706 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PTK6Q13882 451 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 SH3D19Q5HYK7 790 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 FAXCQ5TGI0 409 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 MARC1Q5VT66 337 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 FBXL19Q6PCT2 694 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PRR23CQ6ZRP0 262 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 DDX42Q86XP3 938 aaKnown RBP eCLIP10.06□□□□□ -0.8
GABPA-201ENST00000354828 ZDHHC17Q8IUH5 632 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 SLC20A1Q8WUM9 679 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 MYLPFQ96A32 169 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 TCF25Q9BQ70 676 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PARD6BQ9BYG5 372 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 GOLPH3Q9H4A6 298 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 ZNF214Q9UL59 606 aaPredicted RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 VANGL2Q9ULK5 521 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PLAAQ9Y263 795 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 RBAK-RBAKDNI3L0D1 243 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 CCL16O15467 120 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 BAG2O95816 211 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 FGRP09769 529 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 SNHG28P0DPA3 235 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 THOP1P52888 689 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 SPARCL1Q14515 664 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 MTFR1Q15390 333 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 DDR2Q16832 855 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 TEKT4Q8WW24 435 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 NCLNQ969V3 563 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 TSEN34Q9BSV6 310 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 VPS9D1Q9Y2B5 631 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 F8VZ95 297 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PPP1R11O60927 126 aaPredicted RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 SLC10A3P09131 477 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 NNTQ13423 1086 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 TARBP2Q15633 366 aaKnown RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 SYDE1Q6ZW31 735 aaPredicted RBP10.06□□□□□ -0.8
GABPA-201ENST00000354828 ACAD11Q709F0 780 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 LPCAT1Q8NF37 534 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 CYTH2Q99418 400 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 POPDC2Q9HBU9 364 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 RBM22Q9NW64 420 aaKnown RBP eCLIP10.06□□□□□ -0.8
GABPA-201ENST00000354828 C2CD2Q9Y426 696 aa10.06□□□□□ -0.8
GABPA-201ENST00000354828 PHF2O75151 1096 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GYPCP04921 128 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 RARGP13631 454 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GTF2BQ00403 316 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 DUSP4Q13115 394 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 MAPK8IP2Q13387 824 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 SPDYAQ5MJ70 313 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ETNPPLQ8TBG4 499 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 GPR152Q8TDT2 470 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 PPWD1Q96BP3 646 aaKnown RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 RIPOR3Q96MK2 946 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 TRAIPQ9BWF2 469 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 MAF1Q9H063 256 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 DLG5Q8TDM6 1919 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ZW10O43264 779 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 LUC7L3O95232 432 aaKnown RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 MZF1P28698 734 aaPredicted RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 SMAD3P84022 425 aaKnown RBP10.05□□□□□ -0.8
GABPA-201ENST00000354828 GCNT1Q02742 428 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 ACOX1Q15067 660 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 RAB30Q15771 203 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 NFIL3Q16649 462 aa10.05□□□□□ -0.8
GABPA-201ENST00000354828 TTC31Q49AM3 519 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms