RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 ARID3AQ99856 593 aa22.49■■□□□ 1.19
UBE2D3-201ENST00000321805 UBXN6Q9BZV1 441 aa22.49■■□□□ 1.19
UBE2D3-201ENST00000321805 NACA2Q9H009 215 aa22.49■■□□□ 1.19
UBE2D3-201ENST00000321805 CCSER2Q9H7U1 834 aa22.49■■□□□ 1.19
UBE2D3-201ENST00000321805 ZNF292O60281 2723 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 ADH1CP00326 375 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 EGFP01133 1207 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 CYP17A1P05093 508 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 ACO1P21399 889 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 KIF11P52732 1056 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 MARSP56192 900 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 SLC8A3P57103 927 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 GPRIN1Q7Z2K8 1008 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 CCDC186Q7Z3E2 898 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 LONP2Q86WA8 852 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 ADGRG2Q8IZP9 1017 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 ZNF276Q8N554 614 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 SMG5Q9UPR3 1016 aaKnown RBP22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 CTNND2Q9UQB3 1225 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 SH3BP1Q9Y3L3 701 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 GPR179Q6PRD1 2367 aa22.48■■□□□ 1.19
UBE2D3-201ENST00000321805 CCDC163A0A0D9SF12 145 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 RNF40O75150 1001 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 GOLGA8FQ08AF8 430 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 GOLGA8DPQ0D2H9 430 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 DHCR24Q15392 516 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 TADA2BQ86TJ2 420 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 SECISBP2LQ93073 1101 aaKnown RBP22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 ACDQ96AP0 544 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 FBRSL1Q9HCM7 1045 aaKnown RBP22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 KIAA1468Q9P260 1216 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 USP3Q9Y6I4 520 aa22.47■■□□□ 1.19
UBE2D3-201ENST00000321805 KIAA1549LQ6ZVL6 1849 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 BIN1O00499 593 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 CYP26A1O43174 497 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 FGFR1OPO95684 399 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 ATP5C1P36542 298 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 OPRD1P41143 372 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 ANKRD52Q8NB46 1076 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 JAKMIP2Q96AA8 810 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 NT5C1BQ96P26 610 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 CDK5RAP1Q96SZ6 601 aaKnown RBP22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 KIAA1257Q9ULG3 409 aa22.46■■□□□ 1.19
UBE2D3-201ENST00000321805 WDR87Q6ZQQ6 2873 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 GAB4Q2WGN9 574 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 WDR5BQ86VZ2 330 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 CAMKK1Q8N5S9 505 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 UBR7Q8N806 425 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 CLIC5Q9NZA1 410 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 RAB23Q9ULC3 237 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 SLC8A2Q9UPR5 921 aa22.45■■□□□ 1.18
UBE2D3-201ENST00000321805 FRYLO94915 3013 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 ADH5P11766 374 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 ANP32AP39687 249 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 BCAT1P54687 386 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 SGO2Q562F6 1265 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 RAB41Q5JT25 222 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 NAIF1Q69YI7 327 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 PKN3Q6P5Z2 889 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 RHBDF2Q6PJF5 856 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 SYT13Q7L8C5 426 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 TRIM59Q8IWR1 403 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 ARHGAP18Q8N392 663 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 GPR161Q8N6U8 529 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 EZH1Q92800 747 aaPredicted RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 HINFPQ9BQA5 517 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 C2orf42Q9NWW7 574 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 NCDNQ9UBB6 729 aa22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 LSM7Q9UK45 103 aaKnown RBP22.44■■□□□ 1.18
UBE2D3-201ENST00000321805 CCDC192P0DO97 292 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 RALAP11233 206 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 VDRP11473 427 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 FNTBP49356 437 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 PGFP49763 221 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 GAD2Q05329 585 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 PREPLQ4J6C6 727 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 HTR3DQ70Z44 454 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 PIGZQ86VD9 579 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 KLF16Q9BXK1 252 aaPredicted RBP22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 NMUR1Q9HB89 426 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 OSER1Q9NX31 292 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 HESX1Q9UBX0 185 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 DNMT3LQ9UJW3 386 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 NAGPAQ9UK23 515 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 ATG2BQ96BY7 2078 aa22.43■■□□□ 1.18
UBE2D3-201ENST00000321805 A0A1W2PQH9 124 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 XPO1O14980 1071 aaKnown RBP22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 HOXC11O43248 304 aaPredicted RBP22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 PAEPP09466 180 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 RARGP13631 454 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 GCNT1Q02742 428 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 TTC30AQ86WT1 665 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 RPLP0P6Q8NHW5 317 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 PNKPQ96T60 521 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 RWDD2AQ9UIY3 292 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 GMEB2Q9UKD1 530 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 TSPAN16Q9UKR8 245 aa22.42■■□□□ 1.18
UBE2D3-201ENST00000321805 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms