RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 FCHO1O14526 889 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 RFC1P35251 1148 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 GCLCP48506 637 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 IRX4P78413 519 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 LBRQ14739 615 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SMAD1Q15797 465 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 IRGCQ6NXR0 463 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CCDC62Q6P9F0 684 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 RGS9BPQ6ZS82 235 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 ERO1BQ86YB8 467 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 TREML1Q86YW5 311 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 RELL1Q8IUW5 271 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SH3TC2Q8TF17 1288 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 RNPEPQ9H4A4 650 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 TLE6Q9H808 572 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 LNPEPQ9UIQ6 1025 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 PCDHGC3Q9UN70 934 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 MEI4A8MW99 385 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 B4GALT4O60513 344 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 BASP1P80723 227 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 PIGHQ14442 188 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 IZUMO2Q6UXV1 221 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CDHR3Q6ZTQ4 885 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 THTPAQ9BU02 230 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SHCBP1LQ9BZQ2 653 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 ADARB2Q9NS39 739 aaKnown RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CYTH4Q9UIA0 394 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CYB561D2O14569 222 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 MAP3K7O43318 606 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CDH5P33151 784 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 FAAP100Q0VG06 881 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 TTLL12Q14166 644 aaPredicted RBP18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 PTPN20Q4JDL3 420 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 RASIP1Q5U651 963 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 LRRC38Q5VT99 294 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 EXOC8Q8IYI6 725 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CFAP61Q8NHU2 1237 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 TTC25Q96NG3 672 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SLC13A1Q9BZW2 595 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 CDT1Q9H211 546 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SMARCAD1Q9H4L7 1026 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 OCEL1Q9H607 264 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 SYNCQ9H7C4 482 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 AGTPBP1Q9UPW5 1226 aa18.55■□□□□ 0.56
TSPAN17-201ENST00000298564 DNAJC25-GNG10A0A024R161 153 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 KLHL33A6NCF5 533 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 ZWINTO95229 277 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 MAP3K6O95382 1288 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 ITGBL1O95965 494 aaPredicted RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 MT-ND3P03897 115 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 CD48P09326 243 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 RPS6KA3P51812 740 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 LMNB2Q03252 620 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 MBTD1Q05BQ5 628 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 RASA2Q15283 850 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TFDP3Q5H9I0 405 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 EFCAB3Q8N7B9 438 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 BANPQ8N9N5 519 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 PPFIBP2Q8ND30 876 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 HIPK4Q8NE63 616 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 USP6NLQ92738 828 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TUBGCP5Q96RT8 1024 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 RPF1Q9H9Y2 349 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 SAR1AQ9NR31 198 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 SIX4Q9UIU6 781 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 GPR25O00155 361 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 SORBS2O94875 1100 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TMEM63AO94886 807 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TOP3BO95985 862 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 NFICP08651 508 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 DLDP09622 509 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TDRPQ86YL5 185 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 JOSD2Q8TAC2 188 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 CPT1BQ92523 772 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 ANKRD27Q96NW4 1050 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 GBP5Q96PP8 586 aa18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 TRIM56Q9BRZ2 755 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 PPARGC1AQ9UBK2 798 aaKnown RBP18.54■□□□□ 0.56
TSPAN17-201ENST00000298564 hCG_1818297A0A087WSY0 165 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 KRT3P12035 628 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 PSMA2P25787 234 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 CDKN2BP42772 138 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 GJC2Q5T442 439 aaPredicted RBP18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 FAM43BQ6ZT52 329 aaPredicted RBP18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 ACTL9Q8TC94 416 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 ACAP3Q96P50 834 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 IRAK4Q9NWZ3 460 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 CXCL11O14625 94 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 HBP1O60381 514 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 RTN3O95197 1032 aaPredicted RBP18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 ALDH18A1P54886 795 aaKnown RBP18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 CDK16Q00536 496 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 OTUD4Q01804 1114 aaKnown RBP18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 TAP1Q03518 808 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 MORF4L2Q15014 288 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 ZNF667Q5HYK9 610 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 EFHC2Q5JST6 749 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 ANKRD13AQ8IZ07 590 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 C1orf127Q8N9H9 656 aa18.53■□□□□ 0.56
TSPAN17-201ENST00000298564 FAM71DQ8N9W8 422 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms