RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	BIM1	P40013	344 aa		4.21	□□□□□ -1.74
snR49	snR49	UTP4	Q06679	776 aa	Known RBP	4.21	□□□□□ -1.74
snR49	snR49	TIF1	P10081	395 aa	Known RBP	4.2	□□□□□ -1.74
snR49	snR49	SAC7	P17121	654 aa		4.2	□□□□□ -1.74
snR49	snR49	RRM3	P38766	723 aa		4.2	□□□□□ -1.74
snR49	snR49	ATG32	P40458	529 aa		4.2	□□□□□ -1.74
snR49	snR49	IRC24	P40580	263 aa		4.2	□□□□□ -1.74
snR49	snR49	ACS2	P52910	683 aa	Known RBP	4.2	□□□□□ -1.74
snR49	snR49	RQC2	Q12532	1038 aa	Known RBP	4.2	□□□□□ -1.74
snR49	snR49	MRP10	O75012	95 aa		4.19	□□□□□ -1.74
snR49	snR49	RTG2	P32608	588 aa	Known RBP	4.19	□□□□□ -1.74
snR49	snR49	HXT5	P38695	592 aa		4.19	□□□□□ -1.74
snR49	snR49	APM2	P38700	605 aa		4.19	□□□□□ -1.74
snR49	snR49	UBP1	P25037	809 aa		4.18	□□□□□ -1.74
snR49	snR49	ARI1	P53111	347 aa	Known RBP	4.18	□□□□□ -1.74
snR49	snR49	RPC31	P17890	251 aa		4.17	□□□□□ -1.74
snR49	snR49	PHO87	P25360	923 aa		4.17	□□□□□ -1.74
snR49	snR49	SCD5	P34758	872 aa		4.17	□□□□□ -1.74
snR49	snR49	KTR7	P40504	517 aa		4.17	□□□□□ -1.74
snR49	snR49	TRP3	P00937	484 aa		4.16	□□□□□ -1.74
snR49	snR49	SFA1	P32771	386 aa		4.16	□□□□□ -1.74
snR49	snR49	NGR1	P32831	672 aa	Known RBP	4.16	□□□□□ -1.74
snR49	snR49	HAP4	P14064	554 aa		4.15	□□□□□ -1.75
snR49	snR49	IDI1	P15496	288 aa		4.15	□□□□□ -1.75
snR49	snR49	YKR073C	P36153	106 aa		4.15	□□□□□ -1.75
snR49	snR49	GAS4	Q08271	471 aa		4.15	□□□□□ -1.75
snR49	snR49	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
snR49	snR49	QDR2	P40474	542 aa		4.14	□□□□□ -1.75
snR49	snR49	AVT1	P47082	602 aa		4.14	□□□□□ -1.75
snR49	snR49	COQ2	P32378	372 aa		4.13	□□□□□ -1.75
snR49	snR49	KAE1	P36132	386 aa		4.13	□□□□□ -1.75
snR49	snR49	RPL34B	P40525	121 aa	Known RBP	4.13	□□□□□ -1.75
snR49	snR49	ROM1	P53046	1155 aa		4.13	□□□□□ -1.75
snR49	snR49	ITC1	P53125	1264 aa		4.13	□□□□□ -1.75
snR49	snR49	MED7	Q08278	222 aa		4.13	□□□□□ -1.75
snR49	snR49	YLR122C	Q12312	125 aa		4.13	□□□□□ -1.75
snR49	snR49	YER156C	P40093	338 aa	Known RBP	4.12	□□□□□ -1.75
snR49	snR49	SLP1	Q12232	587 aa		4.12	□□□□□ -1.75
snR49	snR49	TY4B-P	A0A0B7P3V8	1104 aa		4.11	□□□□□ -1.75
snR49	snR49	RSC6	P25632	483 aa		4.11	□□□□□ -1.75
snR49	snR49	CTH1	P47976	325 aa		4.11	□□□□□ -1.75
snR49	snR49	TY4A-H	Q6Q5P6	413 aa		4.11	□□□□□ -1.75
snR49	snR49	GAL2	P13181	574 aa		4.1	□□□□□ -1.75
snR49	snR49	GIP2	P40036	548 aa		4.1	□□□□□ -1.75
snR49	snR49	TED1	P40533	473 aa		4.1	□□□□□ -1.75
snR49	snR49	TY1A-NL1	Q12391	440 aa	Known RBP	4.1	□□□□□ -1.75
snR49	snR49	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
snR49	snR49	TOS1	P38288	455 aa		4.09	□□□□□ -1.75
snR49	snR49	CAB1	Q04430	367 aa		4.09	□□□□□ -1.75
snR49	snR49	VAN1	P23642	535 aa		4.08	□□□□□ -1.76
snR49	snR49	VMA3	P25515	160 aa		4.08	□□□□□ -1.76
snR49	snR49	NAM7	P30771	971 aa	Known RBP	4.08	□□□□□ -1.76
snR49	snR49	SUV3	P32580	737 aa		4.08	□□□□□ -1.76
snR49	snR49	LIP5	P32875	414 aa		4.08	□□□□□ -1.76
snR49	snR49	SAF1	P38352	637 aa		4.08	□□□□□ -1.76
snR49	snR49	YGR130C	P53278	816 aa		4.08	□□□□□ -1.76
snR49	snR49	SOK2	P53438	785 aa	Predicted RBP	4.08	□□□□□ -1.76
snR49	snR49	YOR296W	Q08748	1289 aa		4.08	□□□□□ -1.76
snR49	snR49	BRE4	Q07660	1125 aa		4.07	□□□□□ -1.76
snR49	snR49	CHS2	P14180	963 aa		4.06	□□□□□ -1.76
snR49	snR49	MRPL33	P20084	86 aa		4.06	□□□□□ -1.76
snR49	snR49	BSD2	P38356	321 aa		4.06	□□□□□ -1.76
snR49	snR49	CWH41	P53008	833 aa		4.06	□□□□□ -1.76
snR49	snR49	AOS1	Q06624	347 aa		4.06	□□□□□ -1.76
snR49	snR49	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
snR49	snR49	SIS2	P36024	562 aa		4.05	□□□□□ -1.76
snR49	snR49	GIP1	P38229	639 aa		4.05	□□□□□ -1.76
snR49	snR49	DYS1	P38791	387 aa		4.05	□□□□□ -1.76
snR49	snR49	AKR1	P39010	764 aa		4.05	□□□□□ -1.76
snR49	snR49	DSE4	P53753	1117 aa		4.05	□□□□□ -1.76
snR49	snR49	REC8	Q12188	680 aa		4.05	□□□□□ -1.76
snR49	snR49	YBR197C	P38306	217 aa		4.04	□□□□□ -1.76
snR49	snR49	YJL181W	P46987	611 aa		4.04	□□□□□ -1.76
snR49	snR49	HGH1	P48362	394 aa	Known RBP	4.04	□□□□□ -1.76
snR49	snR49	MAG2	Q06436	670 aa	Known RBP	4.04	□□□□□ -1.76
snR49	snR49	TRS33	Q99394	268 aa		4.04	□□□□□ -1.76
snR49	snR49	CYC7	P00045	113 aa		4.03	□□□□□ -1.76
snR49	snR49	ELM1	P32801	640 aa		4.03	□□□□□ -1.76
snR49	snR49	TGL4	P36165	910 aa		4.03	□□□□□ -1.76
snR49	snR49	YIL165C	P40446	119 aa		4.03	□□□□□ -1.76
snR49	snR49	SPO74	P45819	413 aa		4.03	□□□□□ -1.76
snR49	snR49	PPT1	P53043	513 aa		4.03	□□□□□ -1.76
snR49	snR49	FOX2	Q02207	900 aa	Known RBP	4.03	□□□□□ -1.76
snR49	snR49	RSC2	Q06488	889 aa		4.03	□□□□□ -1.76
snR49	snR49	LDH1	P38139	375 aa		4.02	□□□□□ -1.77
snR49	snR49	ECM23	Q02710	187 aa		4.02	□□□□□ -1.77
snR49	snR49	ISW1	P38144	1129 aa		4.01	□□□□□ -1.77
snR49	snR49	PAN5	P38787	379 aa		4.01	□□□□□ -1.77
snR49	snR49	INP51	P40559	946 aa	Known RBP	4.01	□□□□□ -1.77
snR49	snR49	MSN1	P22148	382 aa		4	□□□□□ -1.77
snR49	snR49	TTI1	P36097	1038 aa		3.99	□□□□□ -1.77
snR49	snR49	GUP1	P53154	560 aa		3.99	□□□□□ -1.77
snR49	snR49	NCE103	P53615	221 aa		3.99	□□□□□ -1.77
snR49	snR49	BIO5	P53744	561 aa	Known RBP	3.99	□□□□□ -1.77
snR49	snR49	EMG1	Q06287	252 aa	Known RBP	3.99	□□□□□ -1.77
snR49	snR49	MSB1	P21339	1137 aa	Known RBP	3.98	□□□□□ -1.77
snR49	snR49	RNQ1	P25367	405 aa		3.98	□□□□□ -1.77
snR49	snR49	ISC10	P32645	267 aa		3.98	□□□□□ -1.77
snR49	snR49	TFA2	P36145	328 aa		3.98	□□□□□ -1.77
snR49	snR49	SEA4	P38164	1038 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 25.1 ms