RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C GAS4Q08271 471 aa4.49□□□□□ -1.69
SSN8YNL025C AVT1P47082 602 aa4.48□□□□□ -1.69
SSN8YNL025C Q0182Q9ZZW1 134 aa4.48□□□□□ -1.69
SSN8YNL025C MLF3P32047 452 aa4.47□□□□□ -1.69
SSN8YNL025C SCD5P34758 872 aa4.47□□□□□ -1.69
SSN8YNL025C SKP1P52286 194 aa4.47□□□□□ -1.69
SSN8YNL025C ACS2P52910 683 aaKnown RBP4.47□□□□□ -1.69
SSN8YNL025C NGR1P32831 672 aaKnown RBP4.46□□□□□ -1.7
SSN8YNL025C GAL2P13181 574 aa4.44□□□□□ -1.7
SSN8YNL025C HXT5P38695 592 aa4.44□□□□□ -1.7
SSN8YNL025C KAP122P32767 1081 aa4.43□□□□□ -1.7
SSN8YNL025C NCL1P38205 684 aaKnown RBP4.43□□□□□ -1.7
SSN8YNL025C TPS3P38426 1054 aaKnown RBP4.43□□□□□ -1.7
SSN8YNL025C VAN1P23642 535 aa4.42□□□□□ -1.7
SSN8YNL025C ROM1P53046 1155 aa4.42□□□□□ -1.7
SSN8YNL025C MTO1P53070 669 aa4.42□□□□□ -1.7
SSN8YNL025C RPC31P17890 251 aa4.41□□□□□ -1.7
SSN8YNL025C APM2P38700 605 aa4.41□□□□□ -1.7
SSN8YNL025C PRK1P40494 810 aa4.41□□□□□ -1.7
SSN8YNL025C NHA1Q99271 985 aa4.41□□□□□ -1.7
SSN8YNL025C KTR7P40504 517 aa4.4□□□□□ -1.71
SSN8YNL025C CWH41P53008 833 aa4.4□□□□□ -1.71
SSN8YNL025C CUS1Q02554 436 aaPredicted RBP4.4□□□□□ -1.71
SSN8YNL025C TRS33Q99394 268 aa4.4□□□□□ -1.71
SSN8YNL025C TTI1P36097 1038 aa4.39□□□□□ -1.71
SSN8YNL025C TGL4P36165 910 aa4.39□□□□□ -1.71
SSN8YNL025C BUD9P53226 547 aa4.39□□□□□ -1.71
SSN8YNL025C IOC4Q04213 475 aa4.39□□□□□ -1.71
SSN8YNL025C PGM2P37012 569 aaKnown RBP4.38□□□□□ -1.71
SSN8YNL025C ALG14P38242 237 aa4.38□□□□□ -1.71
SSN8YNL025C YER156CP40093 338 aaKnown RBP4.37□□□□□ -1.71
SSN8YNL025C GIS4Q04233 774 aa4.37□□□□□ -1.71
SSN8YNL025C AOS1Q06624 347 aa4.37□□□□□ -1.71
SSN8YNL025C SLP1Q12232 587 aa4.37□□□□□ -1.71
SSN8YNL025C NAR1P23503 491 aaKnown RBP4.36□□□□□ -1.71
SSN8YNL025C QDR2P40474 542 aa4.36□□□□□ -1.71
SSN8YNL025C YNR040WP53736 256 aa4.36□□□□□ -1.71
SSN8YNL025C CAB1Q04430 367 aa4.36□□□□□ -1.71
SSN8YNL025C AI3P03877 415 aa4.35□□□□□ -1.71
SSN8YNL025C MRPL33P20084 86 aa4.35□□□□□ -1.71
SSN8YNL025C SUV3P32580 737 aa4.35□□□□□ -1.71
SSN8YNL025C PUF6Q04373 656 aaKnown RBP4.35□□□□□ -1.71
SSN8YNL025C URN1Q06525 465 aaKnown RBP4.35□□□□□ -1.71
SSN8YNL025C YOR296WQ08748 1289 aa4.35□□□□□ -1.71
SSN8YNL025C IDI1P15496 288 aa4.34□□□□□ -1.71
SSN8YNL025C NAB2P32505 525 aaKnown RBP RIP-Chip data4.34□□□□□ -1.71not detected
SSN8YNL025C SFA1P32771 386 aa4.34□□□□□ -1.71
SSN8YNL025C PGM1P33401 570 aaKnown RBP4.34□□□□□ -1.71
SSN8YNL025C DYS1P38791 387 aa4.34□□□□□ -1.71
SSN8YNL025C YRB30P53107 440 aaPredicted RBP4.34□□□□□ -1.71
SSN8YNL025C ECM23Q02710 187 aa4.34□□□□□ -1.71
SSN8YNL025C MED7Q08278 222 aa4.34□□□□□ -1.71
SSN8YNL025C VMA3P25515 160 aa4.33□□□□□ -1.72
SSN8YNL025C ITC1P53125 1264 aa4.33□□□□□ -1.72
SSN8YNL025C SAC7P17121 654 aa4.32□□□□□ -1.72
SSN8YNL025C ELM1P32801 640 aa4.32□□□□□ -1.72
SSN8YNL025C LIP5P32875 414 aa4.32□□□□□ -1.72
SSN8YNL025C LDH1P38139 375 aa4.32□□□□□ -1.72
SSN8YNL025C GIP1P38229 639 aa4.32□□□□□ -1.72
SSN8YNL025C YBR197CP38306 217 aa4.32□□□□□ -1.72
SSN8YNL025C ARI1P53111 347 aaKnown RBP4.32□□□□□ -1.72
SSN8YNL025C NOP7P53261 605 aaKnown RBP4.32□□□□□ -1.72
SSN8YNL025C TOP1P04786 769 aa4.31□□□□□ -1.72
SSN8YNL025C UBX7P38349 436 aa4.31□□□□□ -1.72
SSN8YNL025C YBR287WP38355 427 aa4.31□□□□□ -1.72
SSN8YNL025C ORC1P54784 914 aaPredicted RBP4.31□□□□□ -1.72
SSN8YNL025C RSC2Q06488 889 aa4.31□□□□□ -1.72
SSN8YNL025C PUP1P25043 261 aa4.3□□□□□ -1.72
SSN8YNL025C YKR073CP36153 106 aa4.3□□□□□ -1.72
SSN8YNL025C ISW1P38144 1129 aa4.3□□□□□ -1.72
SSN8YNL025C RRM3P38766 723 aa4.3□□□□□ -1.72
SSN8YNL025C YML020WQ03722 664 aa4.3□□□□□ -1.72
SSN8YNL025C SRS2P12954 1174 aa4.29□□□□□ -1.72
SSN8YNL025C COQ2P32378 372 aa4.29□□□□□ -1.72
SSN8YNL025C KAE1P36132 386 aa4.29□□□□□ -1.72
SSN8YNL025C ALD4P46367 519 aaKnown RBP4.29□□□□□ -1.72
SSN8YNL025C TY4B-PA0A0B7P3V8 1104 aa4.28□□□□□ -1.72
SSN8YNL025C MRP10O75012 95 aa4.28□□□□□ -1.72
SSN8YNL025C TRP3P00937 484 aa4.28□□□□□ -1.72
SSN8YNL025C CPS1P27614 576 aa4.28□□□□□ -1.72
SSN8YNL025C YIL165CP40446 119 aa4.28□□□□□ -1.72
SSN8YNL025C FOX2Q02207 900 aaKnown RBP4.28□□□□□ -1.72
SSN8YNL025C TY4A-HQ6Q5P6 413 aa4.28□□□□□ -1.72
SSN8YNL025C RSC6P25632 483 aa4.27□□□□□ -1.73
SSN8YNL025C ISC10P32645 267 aa4.27□□□□□ -1.73
SSN8YNL025C BSD2P38356 321 aa4.27□□□□□ -1.73
SSN8YNL025C LEM3P42838 414 aa4.27□□□□□ -1.73
SSN8YNL025C PUN1Q06991 263 aa4.27□□□□□ -1.73
SSN8YNL025C MSN1P22148 382 aa4.26□□□□□ -1.73
SSN8YNL025C SSA4P22202 642 aaKnown RBP4.26□□□□□ -1.73
SSN8YNL025C PUB1P32588 453 aaKnown RBP RIP-Chip data4.26□□□□□ -1.73not detected
SSN8YNL025C TOS1P38288 455 aa4.26□□□□□ -1.73
SSN8YNL025C UBP5P39944 805 aa4.26□□□□□ -1.73
SSN8YNL025C GIP2P40036 548 aa4.26□□□□□ -1.73
SSN8YNL025C DSE4P53753 1117 aa4.26□□□□□ -1.73
SSN8YNL025C CWC15Q03772 175 aaKnown RBP4.26□□□□□ -1.73
SSN8YNL025C GAS5Q08193 484 aa4.26□□□□□ -1.73
SSN8YNL025C NOP8Q08287 484 aaPredicted RBP4.26□□□□□ -1.73
SSN8YNL025C GUP1P53154 560 aa4.25□□□□□ -1.73
SSN8YNL025C SLD2P34252 453 aa4.24□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms