RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C CWH41P53008 833 aa5.56□□□□□ -1.52
YMR046CYMR046C PNP1Q05788 311 aa5.56□□□□□ -1.52
YMR046CYMR046C SRS2P12954 1174 aa5.55□□□□□ -1.52
YMR046CYMR046C PDC5P16467 563 aaKnown RBP5.55□□□□□ -1.52
YMR046CYMR046C NGR1P32831 672 aaKnown RBP5.55□□□□□ -1.52
YMR046CYMR046C YML020WQ03722 664 aa5.55□□□□□ -1.52
YMR046CYMR046C HAT1Q12341 374 aa5.55□□□□□ -1.52
YMR046CYMR046C ALA1P40825 983 aaKnown RBP5.54□□□□□ -1.52
YMR046CYMR046C ALD4P46367 519 aaKnown RBP5.54□□□□□ -1.52
YMR046CYMR046C INP52P50942 1183 aa5.54□□□□□ -1.52
YMR046CYMR046C YPQ2Q06328 317 aa5.54□□□□□ -1.52
YMR046CYMR046C MRPL16P38064 232 aa5.53□□□□□ -1.52
YMR046CYMR046C KAR5Q04746 504 aa5.53□□□□□ -1.52
YMR046CYMR046C MCM1P11746 286 aa5.52□□□□□ -1.53
YMR046CYMR046C FUR4P05316 633 aaKnown RBP5.5□□□□□ -1.53
YMR046CYMR046C IRE1P32361 1115 aa5.5□□□□□ -1.53
YMR046CYMR046C YBR197CP38306 217 aa5.5□□□□□ -1.53
YMR046CYMR046C SSF1P38789 453 aaPredicted RBP5.5□□□□□ -1.53
YMR046CYMR046C BOL3P39724 118 aa5.5□□□□□ -1.53
YMR046CYMR046C FOX2Q02207 900 aaKnown RBP5.5□□□□□ -1.53
YMR046CYMR046C RRN6P32786 894 aa5.49□□□□□ -1.53
YMR046CYMR046C AVT1P47082 602 aa5.49□□□□□ -1.53
YMR046CYMR046C CAB1Q04430 367 aa5.49□□□□□ -1.53
YMR046CYMR046C NOP8Q08287 484 aaPredicted RBP5.49□□□□□ -1.53
YMR046CYMR046C YBL113CQ7M4S9 792 aa5.49□□□□□ -1.53
YMR046CYMR046C ISC10P32645 267 aa5.48□□□□□ -1.53
YMR046CYMR046C HXT5P38695 592 aa5.48□□□□□ -1.53
YMR046CYMR046C ERP5P38819 212 aa5.48□□□□□ -1.53
YMR046CYMR046C JJJ2P46997 583 aa5.48□□□□□ -1.53
YMR046CYMR046C Q0182Q9ZZW1 134 aa5.48□□□□□ -1.53
YMR046CYMR046C YNL165WP53891 406 aa5.48□□□□□ -1.53
YMR046CYMR046C TY1A-DR2Q03964 440 aaKnown RBP5.48□□□□□ -1.53
YMR046CYMR046C STB3Q12427 513 aa5.48□□□□□ -1.53
YMR046CYMR046C SCD5P34758 872 aa5.47□□□□□ -1.53
YMR046CYMR046C SHM1P37292 490 aaPredicted RBP5.47□□□□□ -1.53
YMR046CYMR046C TRL1P09880 827 aaKnown RBP5.46□□□□□ -1.54
YMR046CYMR046C SLD2P34252 453 aa5.46□□□□□ -1.54
YMR046CYMR046C BOI1P38041 980 aaKnown RBP5.46□□□□□ -1.54
YMR046CYMR046C GRS1P38088 690 aaKnown RBP5.46□□□□□ -1.54
YMR046CYMR046C GLO3P38682 493 aaKnown RBP5.46□□□□□ -1.54
YMR046CYMR046C QDR1P40475 563 aa5.46□□□□□ -1.54
YMR046CYMR046C ATG1P53104 897 aa5.46□□□□□ -1.54
YMR046CYMR046C LSO1Q3E827 93 aa5.46□□□□□ -1.54
YMR046CYMR046C RPS31P05759 152 aaKnown RBP5.45□□□□□ -1.54
YMR046CYMR046C MRPL33P20084 86 aa5.45□□□□□ -1.54
YMR046CYMR046C MLF3P32047 452 aa5.45□□□□□ -1.54
YMR046CYMR046C SPR3P41901 512 aa5.45□□□□□ -1.54
YMR046CYMR046C YTA6P40328 754 aa5.44□□□□□ -1.54
YMR046CYMR046C MDJ2P42834 146 aa5.44□□□□□ -1.54
YMR046CYMR046C UTP4Q06679 776 aaKnown RBP5.44□□□□□ -1.54
YMR046CYMR046C PSH1Q12161 406 aa5.44□□□□□ -1.54
YMR046CYMR046C VMA3P25515 160 aa5.43□□□□□ -1.54
YMR046CYMR046C PDC6P26263 563 aaKnown RBP5.43□□□□□ -1.54
YMR046CYMR046C STM1P39015 273 aaKnown RBP5.42□□□□□ -1.54
YMR046CYMR046C ACF4P47129 309 aa5.42□□□□□ -1.54
YMR046CYMR046C SEN54Q02825 467 aaPredicted RBP5.42□□□□□ -1.54
YMR046CYMR046C YHL050CP38721 697 aa5.41□□□□□ -1.54
YMR046CYMR046C YHR219WP38900 624 aa5.41□□□□□ -1.54
YMR046CYMR046C QDR2P40474 542 aa5.41□□□□□ -1.54
YMR046CYMR046C SUT1P53032 299 aaKnown RBP5.41□□□□□ -1.54
YMR046CYMR046C BUD9P53226 547 aa5.41□□□□□ -1.54
YMR046CYMR046C APC11Q12157 165 aa5.41□□□□□ -1.54
YMR046CYMR046C RPB10P22139 70 aa5.4□□□□□ -1.55
YMR046CYMR046C LDH1P38139 375 aa5.4□□□□□ -1.55
YMR046CYMR046C MTO1P53070 669 aa5.4□□□□□ -1.55
YMR046CYMR046C NHA1Q99271 985 aa5.4□□□□□ -1.55
YMR046CYMR046C KAP122P32767 1081 aa5.39□□□□□ -1.55
YMR046CYMR046C LEU1P07264 779 aaKnown RBP5.38□□□□□ -1.55
YMR046CYMR046C DYS1P38791 387 aa5.38□□□□□ -1.55
YMR046CYMR046C IPL1P38991 367 aa5.38□□□□□ -1.55
YMR046CYMR046C ALD2P47771 506 aa5.38□□□□□ -1.55
YMR046CYMR046C NUT2Q06213 157 aa5.38□□□□□ -1.55
YMR046CYMR046C MSC6Q08818 692 aaKnown RBP5.38□□□□□ -1.55
YMR046CYMR046C KTR2P33550 425 aa5.37□□□□□ -1.55
YMR046CYMR046C HXT8P40886 569 aa5.37□□□□□ -1.55
YMR046CYMR046C SEC20P28791 383 aa5.36□□□□□ -1.55
YMR046CYMR046C ALG14P38242 237 aa5.36□□□□□ -1.55
YMR046CYMR046C MSC7P38694 644 aa5.36□□□□□ -1.55
YMR046CYMR046C TRS120Q04183 1289 aa5.36□□□□□ -1.55
YMR046CYMR046C FRT1Q99332 602 aa5.36□□□□□ -1.55
YMR046CYMR046C RGP1P16664 663 aa5.35□□□□□ -1.55
YMR046CYMR046C PGM2P37012 569 aaKnown RBP5.35□□□□□ -1.55
YMR046CYMR046C RPP1AP05318 106 aaPredicted RBP5.34□□□□□ -1.55
YMR046CYMR046C RPC31P17890 251 aa5.34□□□□□ -1.55
YMR046CYMR046C MSN1P22148 382 aa5.34□□□□□ -1.55
YMR046CYMR046C HEM3P28789 327 aa5.34□□□□□ -1.55
YMR046CYMR046C SMC1P32908 1225 aa5.34□□□□□ -1.55
YMR046CYMR046C PPX1P38698 397 aa5.34□□□□□ -1.55
YMR046CYMR046C FIR1P40020 876 aa5.34□□□□□ -1.55
YMR046CYMR046C UFD2P54860 961 aa5.34□□□□□ -1.55
YMR046CYMR046C CUS1Q02554 436 aaPredicted RBP5.34□□□□□ -1.55
YMR046CYMR046C NAB2P32505 525 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
YMR046CYMR046C BSD2P38356 321 aa5.33□□□□□ -1.56
YMR046CYMR046C THI12P42883 340 aa5.33□□□□□ -1.56
YMR046CYMR046C THI5P43534 340 aa5.33□□□□□ -1.56
YMR046CYMR046C THI11P47183 340 aa5.33□□□□□ -1.56
YMR046CYMR046C THI13Q07748 340 aa5.33□□□□□ -1.56
YMR046CYMR046C YOR296WQ08748 1289 aa5.33□□□□□ -1.56
YMR046CYMR046C ISW1P38144 1129 aa5.32□□□□□ -1.56
YMR046CYMR046C GIP1P38229 639 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 54.2 ms