RNA–Protein interactions for RNA: YML085C

TUB1, Transcript of Alpha-tubulin, yeastyeast

Gene TUB1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TUB1YML085C YGL242CP53066 181 aa8.44□□□□□ -1.06
TUB1YML085C CDC16P09798 840 aa8.43□□□□□ -1.06
TUB1YML085C RFC1P38630 861 aaKnown RBP8.43□□□□□ -1.06
TUB1YML085C SPL2P38839 148 aa8.43□□□□□ -1.06
TUB1YML085C TIM50Q02776 476 aa8.43□□□□□ -1.06
TUB1YML085C CYB2P00175 591 aa8.42□□□□□ -1.06
TUB1YML085C GLC3P32775 704 aa8.42□□□□□ -1.06
TUB1YML085C ECM21P38167 1117 aaKnown RBP8.42□□□□□ -1.06
TUB1YML085C PEX21P50091 288 aa8.42□□□□□ -1.06
TUB1YML085C SEN54Q02825 467 aaPredicted RBP8.42□□□□□ -1.06
TUB1YML085C IRC4Q03036 179 aa8.42□□□□□ -1.06
TUB1YML085C BRE1Q07457 700 aaKnown RBP8.42□□□□□ -1.06
TUB1YML085C FIG2P25653 1609 aa8.42□□□□□ -1.06
TUB1YML085C NOT3P06102 836 aaKnown RBP8.41□□□□□ -1.06
TUB1YML085C HXT10P43581 546 aa8.41□□□□□ -1.06
TUB1YML085C WRS1Q12109 432 aaKnown RBP8.41□□□□□ -1.06
TUB1YML085C RAD50P12753 1312 aa8.41□□□□□ -1.06
TUB1YML085C FAS2P19097 1887 aaKnown RBP8.4□□□□□ -1.06
TUB1YML085C TPM1P17536 199 aaKnown RBP8.4□□□□□ -1.06
TUB1YML085C GLO3P38682 493 aaKnown RBP8.4□□□□□ -1.06
TUB1YML085C YFH7P43591 353 aa8.4□□□□□ -1.06
TUB1YML085C ARG82P07250 355 aa8.39□□□□□ -1.07
TUB1YML085C LCB1P25045 558 aaKnown RBP8.39□□□□□ -1.07
TUB1YML085C ILV3P39522 585 aaKnown RBP8.39□□□□□ -1.07
TUB1YML085C DUR1,2P32528 1835 aaKnown RBP8.38□□□□□ -1.07
TUB1YML085C AFG2P32794 780 aa8.38□□□□□ -1.07
TUB1YML085C YNL193WP53870 558 aa8.38□□□□□ -1.07
TUB1YML085C THS1P04801 734 aaKnown RBP8.37□□□□□ -1.07
TUB1YML085C HAL5P38970 855 aaKnown RBP8.37□□□□□ -1.07
TUB1YML085C SET4P42948 560 aa8.37□□□□□ -1.07
TUB1YML085C APL6P46682 809 aa8.37□□□□□ -1.07
TUB1YML085C YGR117CP53270 476 aa8.37□□□□□ -1.07
TUB1YML085C RPN7Q06103 429 aaKnown RBP8.37□□□□□ -1.07
TUB1YML085C NKP2Q06162 153 aa8.37□□□□□ -1.07
TUB1YML085C YLR278CQ05854 1341 aa8.37□□□□□ -1.07
TUB1YML085C BOI1P38041 980 aaKnown RBP8.36□□□□□ -1.07
TUB1YML085C PBY1P38254 753 aa8.36□□□□□ -1.07
TUB1YML085C FET4P40988 552 aa8.36□□□□□ -1.07
TUB1YML085C GSM1P42950 618 aa8.36□□□□□ -1.07
TUB1YML085C IOC3P43596 787 aa8.36□□□□□ -1.07
TUB1YML085C PUS6P53294 404 aa8.36□□□□□ -1.07
TUB1YML085C TRM44Q02648 567 aaKnown RBP8.36□□□□□ -1.07
TUB1YML085C AIM7Q12156 149 aa8.36□□□□□ -1.07
TUB1YML085C AI2P03876 854 aa8.35□□□□□ -1.07
TUB1YML085C MDL2P33311 773 aa8.35□□□□□ -1.07
TUB1YML085C NOP2P40991 618 aaKnown RBP8.35□□□□□ -1.07
TUB1YML085C EMP47P43555 445 aa8.35□□□□□ -1.07
TUB1YML085C PIP2P52960 996 aa8.35□□□□□ -1.07
TUB1YML085C ALO1P54783 526 aaKnown RBP8.35□□□□□ -1.07
TUB1YML085C INM2Q05533 292 aa8.35□□□□□ -1.07
TUB1YML085C VAS1P07806 1104 aaKnown RBP8.34□□□□□ -1.07
TUB1YML085C OPI1P21957 404 aa8.34□□□□□ -1.07
TUB1YML085C KTR1P27810 393 aaKnown RBP8.34□□□□□ -1.07
TUB1YML085C SLA1P32790 1244 aa8.34□□□□□ -1.07
TUB1YML085C PTK1P36002 662 aaPredicted RBP8.34□□□□□ -1.07
TUB1YML085C STM1P39015 273 aaKnown RBP8.34□□□□□ -1.07
TUB1YML085C MSH4P40965 878 aaPredicted RBP8.34□□□□□ -1.07
TUB1YML085C GAS5Q08193 484 aa8.34□□□□□ -1.07
TUB1YML085C PEA2P40091 420 aa8.33□□□□□ -1.08
TUB1YML085C IRC8P47046 822 aa8.33□□□□□ -1.08
TUB1YML085C GAL2P13181 574 aa8.32□□□□□ -1.08
TUB1YML085C HPR1P17629 752 aaKnown RBP8.32□□□□□ -1.08
TUB1YML085C RPS7AP26786 190 aaKnown RBP8.32□□□□□ -1.08
TUB1YML085C AVT3P36062 692 aa8.32□□□□□ -1.08
TUB1YML085C YIR042CP40586 236 aa8.32□□□□□ -1.08
TUB1YML085C PUS5Q06244 254 aa8.32□□□□□ -1.08
TUB1YML085C RPL17AP05740 184 aaKnown RBP8.31□□□□□ -1.08
TUB1YML085C SNF3P10870 884 aa8.31□□□□□ -1.08
TUB1YML085C RRP8P38961 392 aaKnown RBP8.31□□□□□ -1.08
TUB1YML085C EPS1P40557 701 aa8.31□□□□□ -1.08
TUB1YML085C RPL17BP46990 184 aaKnown RBP8.31□□□□□ -1.08
TUB1YML085C CWC15Q03772 175 aaKnown RBP8.31□□□□□ -1.08
TUB1YML085C FPR4Q06205 392 aaPredicted RBP8.31□□□□□ -1.08
TUB1YML085C TOS4Q06266 489 aa8.31□□□□□ -1.08
TUB1YML085C TYW1Q08960 810 aaKnown RBP8.31□□□□□ -1.08
TUB1YML085C SSF2Q12153 453 aaPredicted RBP8.31□□□□□ -1.08
TUB1YML085C TAH18Q12181 623 aa8.31□□□□□ -1.08
TUB1YML085C SSA4P22202 642 aaKnown RBP8.3□□□□□ -1.08
TUB1YML085C RPT3P33298 428 aaKnown RBP8.3□□□□□ -1.08
TUB1YML085C KTR3P38130 404 aaPredicted RBP8.3□□□□□ -1.08
TUB1YML085C VHR2P40041 505 aa8.3□□□□□ -1.08
TUB1YML085C YJL171CP46992 396 aa8.3□□□□□ -1.08
TUB1YML085C VPS4P52917 437 aa8.3□□□□□ -1.08
TUB1YML085C RRT6P53117 311 aaPredicted RBP8.3□□□□□ -1.08
TUB1YML085C SNU71P53207 620 aaKnown RBP8.3□□□□□ -1.08
TUB1YML085C MRPS35P53292 345 aa8.3□□□□□ -1.08
TUB1YML085C PCL8Q08966 492 aa8.3□□□□□ -1.08
TUB1YML085C SIS2P36024 562 aa8.29□□□□□ -1.08
TUB1YML085C MET1P36150 593 aa8.29□□□□□ -1.08
TUB1YML085C PES4P39684 611 aa8.29□□□□□ -1.08
TUB1YML085C NIT1P40447 199 aa8.29□□□□□ -1.08
TUB1YML085C BBC1P47068 1157 aa8.29□□□□□ -1.08
TUB1YML085C SLN1P39928 1220 aaPredicted RBP8.29□□□□□ -1.08
TUB1YML085C RIM20Q12033 661 aa8.29□□□□□ -1.08
TUB1YML085C CBP1P07252 654 aa8.28□□□□□ -1.08
TUB1YML085C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
TUB1YML085C GRX7P38068 203 aa8.28□□□□□ -1.08
TUB1YML085C RMD1Q03441 430 aa8.28□□□□□ -1.08
TUB1YML085C YPL260WQ08977 551 aa8.28□□□□□ -1.08
TUB1YML085C FLO11P08640 1367 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms