RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C YGR035CP53222 116 aa6.12□□□□□ -1.43
UBI4YLL039C PPH3P32345 308 aa6.11□□□□□ -1.43
UBI4YLL039C DLD1P32891 587 aa6.11□□□□□ -1.43
UBI4YLL039C ORC1P54784 914 aaPredicted RBP6.11□□□□□ -1.43
UBI4YLL039C HPF1Q05164 967 aa6.11□□□□□ -1.43
UBI4YLL039C UBP2Q01476 1272 aa6.1□□□□□ -1.43
UBI4YLL039C RAD59Q12223 238 aa6.09□□□□□ -1.43
UBI4YLL039C TCB1Q12466 1186 aa6.09□□□□□ -1.43
UBI4YLL039C CHZ1P40019 153 aaPredicted RBP6.08□□□□□ -1.44
UBI4YLL039C YLR419WQ06698 1435 aaKnown RBP6.08□□□□□ -1.44
UBI4YLL039C PSK1P31374 1356 aa6.07□□□□□ -1.44
UBI4YLL039C SCT1P32784 759 aa6.07□□□□□ -1.44
UBI4YLL039C YPR084WQ06821 456 aa6.07□□□□□ -1.44
UBI4YLL039C MKS1P34072 584 aa6.06□□□□□ -1.44
UBI4YLL039C DFG5Q05031 458 aa6.06□□□□□ -1.44
UBI4YLL039C ENT1Q12518 454 aa6.06□□□□□ -1.44
UBI4YLL039C TEC1P18412 486 aa6.05□□□□□ -1.44
UBI4YLL039C LEO1P38439 464 aa6.05□□□□□ -1.44
UBI4YLL039C OSH7P38755 437 aa6.05□□□□□ -1.44
UBI4YLL039C ROG3P43602 733 aa6.05□□□□□ -1.44
UBI4YLL039C RRP5Q05022 1729 aaKnown RBP6.05□□□□□ -1.44
UBI4YLL039C TY4B-HP0C2J7 1802 aa6.04□□□□□ -1.44
UBI4YLL039C TY4B-JP47024 1803 aa6.04□□□□□ -1.44
UBI4YLL039C PRP45P28004 379 aaPredicted RBP6.04□□□□□ -1.44
UBI4YLL039C MTC5Q03897 1148 aa6.04□□□□□ -1.44
UBI4YLL039C TY1A-MR1Q04215 440 aa6.04□□□□□ -1.44
UBI4YLL039C ADE6P38972 1358 aaKnown RBP6.04□□□□□ -1.44
UBI4YLL039C CCP1P00431 361 aa6.03□□□□□ -1.44
UBI4YLL039C LEU2P04173 364 aaPredicted RBP6.03□□□□□ -1.44
UBI4YLL039C POL5P39985 1022 aaKnown RBP6.03□□□□□ -1.44
UBI4YLL039C PRP5P21372 849 aaPredicted RBP6.02□□□□□ -1.45
UBI4YLL039C MTR4P47047 1073 aaKnown RBP6.02□□□□□ -1.45
UBI4YLL039C PRP43P53131 767 aaKnown RBP6.02□□□□□ -1.45
UBI4YLL039C MLP1Q02455 1875 aaKnown RBP6.02□□□□□ -1.45
UBI4YLL039C STE6P12866 1290 aa6.01□□□□□ -1.45
UBI4YLL039C FBP26P32604 452 aa6.01□□□□□ -1.45
UBI4YLL039C BDS1Q08347 646 aa6.01□□□□□ -1.45
UBI4YLL039C MAK16P10962 306 aaPredicted RBP6□□□□□ -1.45
UBI4YLL039C CSE4P36012 229 aa6□□□□□ -1.45
UBI4YLL039C YML133CQ03099 1374 aa6□□□□□ -1.45
UBI4YLL039C YLL067CQ07888 1374 aa6□□□□□ -1.45
UBI4YLL039C YLL066CQ99208 1374 aa6□□□□□ -1.45
UBI4YLL039C RPS24AP0CX31 135 aaKnown RBP5.99□□□□□ -1.45
UBI4YLL039C RPS24BP0CX32 135 aaKnown RBP5.99□□□□□ -1.45
UBI4YLL039C NOP2P40991 618 aaKnown RBP5.99□□□□□ -1.45
UBI4YLL039C NAM8Q00539 523 aaKnown RBP5.99□□□□□ -1.45
UBI4YLL039C IMH1Q06704 911 aaKnown RBP5.99□□□□□ -1.45
UBI4YLL039C DPH6Q12429 685 aa5.98□□□□□ -1.45
UBI4YLL039C MHP1P43638 1398 aa5.97□□□□□ -1.45
UBI4YLL039C CDC19P00549 500 aaKnown RBP5.97□□□□□ -1.45
UBI4YLL039C KIN1P13185 1064 aa5.97□□□□□ -1.45
UBI4YLL039C GUT2P32191 649 aa5.97□□□□□ -1.45
UBI4YLL039C SLM3Q12093 417 aa5.97□□□□□ -1.45
UBI4YLL039C YRF1-2P40105 1681 aa5.97□□□□□ -1.45
UBI4YLL039C SSA2P10592 639 aaKnown RBP5.96□□□□□ -1.46
UBI4YLL039C PDS5Q04264 1277 aa5.96□□□□□ -1.46
UBI4YLL039C YPR204WQ08995 1032 aa5.96□□□□□ -1.46
UBI4YLL039C VTC4P47075 721 aa5.95□□□□□ -1.46
UBI4YLL039C ISU1Q03020 165 aa5.95□□□□□ -1.46
UBI4YLL039C ATG20Q07528 640 aa5.95□□□□□ -1.46
UBI4YLL039C YIL177CP40434 1758 aa5.94□□□□□ -1.46
UBI4YLL039C YJL225CP40889 1758 aa5.94□□□□□ -1.46
UBI4YLL039C PDI1P17967 522 aaKnown RBP5.94□□□□□ -1.46
UBI4YLL039C LYS5P50113 272 aa5.94□□□□□ -1.46
UBI4YLL039C NAF1P53919 492 aaKnown RBP5.94□□□□□ -1.46
UBI4YLL039C YMR074CQ04773 145 aa5.94□□□□□ -1.46
UBI4YLL039C FRA1Q07825 749 aa5.94□□□□□ -1.46
UBI4YLL039C URB1P34241 1764 aaKnown RBP5.93□□□□□ -1.46
UBI4YLL039C ICP55P40051 511 aa5.93□□□□□ -1.46
UBI4YLL039C JJJ3P47138 172 aa5.93□□□□□ -1.46
UBI4YLL039C YRF1-3P0CX14 1859 aa5.93□□□□□ -1.46
UBI4YLL039C YRF1-7P0CX15 1859 aa5.93□□□□□ -1.46
UBI4YLL039C YRF1-6P53819 1859 aa5.93□□□□□ -1.46
UBI4YLL039C STE20Q03497 939 aaKnown RBP5.92□□□□□ -1.46
UBI4YLL039C TAP42Q04372 366 aa5.92□□□□□ -1.46
UBI4YLL039C GAS4Q08271 471 aa5.92□□□□□ -1.46
UBI4YLL039C RSF2P46974 1380 aa5.92□□□□□ -1.46
UBI4YLL039C LEU3P08638 886 aa5.91□□□□□ -1.46
UBI4YLL039C DAL1P32375 460 aa5.91□□□□□ -1.46
UBI4YLL039C GRX4P32642 244 aa5.91□□□□□ -1.46
UBI4YLL039C DOT5P40553 215 aa5.9□□□□□ -1.46
UBI4YLL039C XKS1P42826 600 aa5.9□□□□□ -1.46
UBI4YLL039C HIM1Q06674 414 aa5.9□□□□□ -1.46
UBI4YLL039C AUS1Q08409 1394 aa5.9□□□□□ -1.47
UBI4YLL039C FKS3Q04952 1785 aa5.9□□□□□ -1.47
UBI4YLL039C MDJ1P35191 511 aa5.89□□□□□ -1.47
UBI4YLL039C ENP1P38333 483 aaKnown RBP5.89□□□□□ -1.47
UBI4YLL039C GUA1P38625 525 aaKnown RBP5.89□□□□□ -1.47
UBI4YLL039C CUZ1P53899 274 aa5.89□□□□□ -1.47
UBI4YLL039C ROM2P51862 1356 aaKnown RBP5.89□□□□□ -1.47
UBI4YLL039C APC1P53886 1748 aa5.88□□□□□ -1.47
UBI4YLL039C YEF3P16521 1044 aaKnown RBP5.88□□□□□ -1.47
UBI4YLL039C YKL133CP36066 463 aa5.87□□□□□ -1.47
UBI4YLL039C APL6P46682 809 aa5.87□□□□□ -1.47
UBI4YLL039C FOX2Q02207 900 aaKnown RBP5.87□□□□□ -1.47
UBI4YLL039C PUS1Q12211 544 aaKnown RBP5.87□□□□□ -1.47
UBI4YLL039C SEC3P33332 1336 aaKnown RBP5.87□□□□□ -1.47
UBI4YLL039C KAR2P16474 682 aaKnown RBP5.86□□□□□ -1.47
UBI4YLL039C DLD3P39976 496 aaKnown RBP5.86□□□□□ -1.47
UBI4YLL039C RPN11P43588 306 aaKnown RBP5.86□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms