RNA–Protein interactions for RNA: YHR105W

YPT35, Transcript of Endosomal protein of unknown function, yeast

Gene YPT35, Length 645 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPT35	YHR105W	ISC10	P32645	267 aa		5.73	□□□□□ -1.49
YPT35	YHR105W	ALD2	P47771	506 aa		5.73	□□□□□ -1.49
YPT35	YHR105W	ATG1	P53104	897 aa		5.73	□□□□□ -1.49
YPT35	YHR105W	ATE1	P16639	503 aa		5.72	□□□□□ -1.49
YPT35	YHR105W	MLF3	P32047	452 aa		5.72	□□□□□ -1.49
YPT35	YHR105W	FRT1	Q99332	602 aa		5.72	□□□□□ -1.49
YPT35	YHR105W	FUR4	P05316	633 aa	Known RBP	5.71	□□□□□ -1.5
YPT35	YHR105W	PDC6	P26263	563 aa	Known RBP	5.71	□□□□□ -1.5
YPT35	YHR105W	SEC20	P28791	383 aa		5.71	□□□□□ -1.5
YPT35	YHR105W	KRE33	P53914	1056 aa	Known RBP	5.71	□□□□□ -1.5
YPT35	YHR105W	PSH1	Q12161	406 aa		5.71	□□□□□ -1.5
YPT35	YHR105W	SCD5	P34758	872 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	PPX1	P38698	397 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	YTA6	P40328	754 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	QDR1	P40475	563 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	JJJ3	P47138	172 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	NOP7	P53261	605 aa	Known RBP	5.7	□□□□□ -1.5
YPT35	YHR105W	ADE12	P80210	433 aa	Known RBP	5.7	□□□□□ -1.5
YPT35	YHR105W	NUT2	Q06213	157 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	LSO1	Q3E827	93 aa		5.7	□□□□□ -1.5
YPT35	YHR105W	MRPL33	P20084	86 aa		5.69	□□□□□ -1.5
YPT35	YHR105W	VMA3	P25515	160 aa		5.68	□□□□□ -1.5
YPT35	YHR105W	KTR2	P33550	425 aa		5.68	□□□□□ -1.5
YPT35	YHR105W	MRPL16	P38064	232 aa		5.68	□□□□□ -1.5
YPT35	YHR105W	GLO3	P38682	493 aa	Known RBP	5.68	□□□□□ -1.5
YPT35	YHR105W	SYT1	Q06836	1226 aa		5.68	□□□□□ -1.5
YPT35	YHR105W	YDR461C-A	Q2V2P7	80 aa		5.68	□□□□□ -1.5
YPT35	YHR105W	RPB10	P22139	70 aa		5.67	□□□□□ -1.5
YPT35	YHR105W	UTP4	Q06679	776 aa	Known RBP	5.67	□□□□□ -1.5
YPT35	YHR105W	STB3	Q12427	513 aa		5.67	□□□□□ -1.5
YPT35	YHR105W	LEU1	P07264	779 aa	Known RBP	5.66	□□□□□ -1.5
YPT35	YHR105W	FPS1	P23900	669 aa		5.66	□□□□□ -1.5
YPT35	YHR105W	QDR2	P40474	542 aa		5.66	□□□□□ -1.5
YPT35	YHR105W	POL32	P47110	350 aa		5.66	□□□□□ -1.5
YPT35	YHR105W	ACF4	P47129	309 aa		5.66	□□□□□ -1.5
YPT35	YHR105W	APC11	Q12157	165 aa		5.66	□□□□□ -1.5
YPT35	YHR105W	MET4	P32389	672 aa		5.65	□□□□□ -1.5
YPT35	YHR105W	MTO1	P53070	669 aa		5.65	□□□□□ -1.5
YPT35	YHR105W	ASF1	P32447	279 aa		5.64	□□□□□ -1.51
YPT35	YHR105W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	5.64	□□□□□ -1.51	not detected
YPT35	YHR105W	KAP122	P32767	1081 aa		5.64	□□□□□ -1.51
YPT35	YHR105W	MET10	P39692	1035 aa		5.64	□□□□□ -1.51
YPT35	YHR105W	SUT1	P53032	299 aa	Known RBP	5.64	□□□□□ -1.51
YPT35	YHR105W	GPI13	Q07830	1017 aa		5.64	□□□□□ -1.51
YPT35	YHR105W	RPP1A	P05318	106 aa	Predicted RBP	5.63	□□□□□ -1.51
YPT35	YHR105W	SPR3	P41901	512 aa		5.63	□□□□□ -1.51
YPT35	YHR105W	THI12	P42883	340 aa		5.63	□□□□□ -1.51
YPT35	YHR105W	THI5	P43534	340 aa		5.63	□□□□□ -1.51
YPT35	YHR105W	THI11	P47183	340 aa		5.63	□□□□□ -1.51
YPT35	YHR105W	THI13	Q07748	340 aa		5.63	□□□□□ -1.51
YPT35	YHR105W	RGP1	P16664	663 aa		5.62	□□□□□ -1.51
YPT35	YHR105W	RPC31	P17890	251 aa		5.62	□□□□□ -1.51
YPT35	YHR105W	AI1	P03875	834 aa		5.61	□□□□□ -1.51
YPT35	YHR105W	SEC8	P32855	1065 aa		5.61	□□□□□ -1.51
YPT35	YHR105W	LDH1	P38139	375 aa		5.61	□□□□□ -1.51
YPT35	YHR105W	MNL2	Q12205	849 aa		5.61	□□□□□ -1.51
YPT35	YHR105W	MSN1	P22148	382 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	BSD2	P38356	321 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	DYS1	P38791	387 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	ICP55	P40051	511 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	YJR107W	P47145	328 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	CUS1	Q02554	436 aa	Predicted RBP	5.6	□□□□□ -1.51
YPT35	YHR105W	OYE2	Q03558	400 aa	Known RBP	5.6	□□□□□ -1.51
YPT35	YHR105W	THI72	Q08579	599 aa		5.6	□□□□□ -1.51
YPT35	YHR105W	MDJ1	P35191	511 aa		5.59	□□□□□ -1.51
YPT35	YHR105W	FYV10	P40492	516 aa		5.59	□□□□□ -1.51
YPT35	YHR105W	HXT8	P40886	569 aa		5.59	□□□□□ -1.51
YPT35	YHR105W	YNR040W	P53736	256 aa		5.59	□□□□□ -1.51
YPT35	YHR105W	TRS120	Q04183	1289 aa		5.59	□□□□□ -1.51
YPT35	YHR105W	RGD2	P43556	714 aa		5.58	□□□□□ -1.52
YPT35	YHR105W	SKP1	P52286	194 aa		5.58	□□□□□ -1.52
YPT35	YHR105W	NSG2	P53898	299 aa		5.58	□□□□□ -1.52
YPT35	YHR105W	PHM7	Q12252	991 aa		5.58	□□□□□ -1.52
YPT35	YHR105W	GPM1	P00950	247 aa	Known RBP	5.57	□□□□□ -1.52
YPT35	YHR105W	MTC5	Q03897	1148 aa		5.57	□□□□□ -1.52
YPT35	YHR105W	YOR296W	Q08748	1289 aa		5.57	□□□□□ -1.52
YPT35	YHR105W	PUS1	Q12211	544 aa	Known RBP	5.57	□□□□□ -1.52
YPT35	YHR105W	PHO4	P07270	312 aa	Known RBP	5.56	□□□□□ -1.52
YPT35	YHR105W	MCM2	P29469	868 aa		5.56	□□□□□ -1.52
YPT35	YHR105W	MET1	P36150	593 aa		5.56	□□□□□ -1.52
YPT35	YHR105W	GIP1	P38229	639 aa		5.56	□□□□□ -1.52
YPT35	YHR105W	TY1A-DR2	Q03964	440 aa	Known RBP	5.56	□□□□□ -1.52
YPT35	YHR105W	NCL1	P38205	684 aa	Known RBP	5.55	□□□□□ -1.52
YPT35	YHR105W	MSC7	P38694	644 aa		5.55	□□□□□ -1.52
YPT35	YHR105W	ITC1	P53125	1264 aa		5.55	□□□□□ -1.52
YPT35	YHR105W	HEH2	Q03281	663 aa		5.55	□□□□□ -1.52
YPT35	YHR105W	PDC5	P16467	563 aa	Known RBP	5.54	□□□□□ -1.52
YPT35	YHR105W	KNS1	P32350	737 aa	Predicted RBP	5.54	□□□□□ -1.52
YPT35	YHR105W	ISW1	P38144	1129 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	APM2	P38700	605 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	OCA5	P38738	679 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	RAD55	P38953	406 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	YFL066C	P43538	392 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	YNR014W	P53719	212 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	UFD2	P54860	961 aa		5.54	□□□□□ -1.52
YPT35	YHR105W	TIF6	Q12522	245 aa	Known RBP	5.54	□□□□□ -1.52
YPT35	YHR105W	SMC1	P32908	1225 aa		5.53	□□□□□ -1.52
YPT35	YHR105W	NTA1	P40354	457 aa		5.53	□□□□□ -1.52
YPT35	YHR105W	SBE2	P42223	864 aa	Known RBP	5.53	□□□□□ -1.52
YPT35	YHR105W	TOS4	Q06266	489 aa		5.53	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 117.1 ms