RNA–Protein interactions for RNA: YGL248W

PDE1, Transcript of Low-affinity cyclic AMP phosphodiesterase, yeastyeast

Gene PDE1, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDE1YGL248W YOL057WQ08225 711 aa6.57□□□□□ -1.36
PDE1YGL248W MDJ1P35191 511 aa6.56□□□□□ -1.36
PDE1YGL248W MPE1P35728 441 aaKnown RBP6.56□□□□□ -1.36
PDE1YGL248W KAR1P11927 433 aa6.55□□□□□ -1.36
PDE1YGL248W SRP40P32583 406 aaPredicted RBP6.55□□□□□ -1.36
PDE1YGL248W TBS1P38114 1094 aa6.55□□□□□ -1.36
PDE1YGL248W SSN3P39073 555 aa6.55□□□□□ -1.36
PDE1YGL248W NSG2P53898 299 aa6.55□□□□□ -1.36
PDE1YGL248W POB3Q04636 552 aaKnown RBP6.55□□□□□ -1.36
PDE1YGL248W AHP1P38013 176 aaKnown RBP6.54□□□□□ -1.36
PDE1YGL248W HAL5P38970 855 aaKnown RBP6.54□□□□□ -1.36
PDE1YGL248W POL5P39985 1022 aaKnown RBP6.54□□□□□ -1.36
PDE1YGL248W IES1P43579 692 aa6.54□□□□□ -1.36
PDE1YGL248W YMR265CQ03508 461 aaKnown RBP6.54□□□□□ -1.36
PDE1YGL248W AI1P03875 834 aa6.53□□□□□ -1.36
PDE1YGL248W RTG2P32608 588 aaKnown RBP6.53□□□□□ -1.36
PDE1YGL248W SLA1P32790 1244 aa6.53□□□□□ -1.36
PDE1YGL248W LSB3P43603 459 aaKnown RBP6.53□□□□□ -1.36
PDE1YGL248W YGL081WP53156 320 aa6.53□□□□□ -1.36
PDE1YGL248W ALG12P53730 551 aa6.53□□□□□ -1.36
PDE1YGL248W CEF1Q03654 590 aaPredicted RBP6.53□□□□□ -1.36
PDE1YGL248W MSC6Q08818 692 aaKnown RBP6.53□□□□□ -1.36
PDE1YGL248W TY1A-DR3Q12441 440 aa6.53□□□□□ -1.36
PDE1YGL248W NHA1Q99271 985 aa6.53□□□□□ -1.36
PDE1YGL248W DIT1P21623 536 aa6.52□□□□□ -1.37
PDE1YGL248W UTP7P40055 554 aaKnown RBP6.52□□□□□ -1.37
PDE1YGL248W ATG3P40344 310 aa6.52□□□□□ -1.37
PDE1YGL248W POL32P47110 350 aa6.52□□□□□ -1.37
PDE1YGL248W ESF2P53743 316 aaKnown RBP6.52□□□□□ -1.37
PDE1YGL248W RRP15Q06511 250 aaPredicted RBP6.52□□□□□ -1.37
PDE1YGL248W THI72Q08579 599 aa6.52□□□□□ -1.37
PDE1YGL248W BIO2P32451 375 aa6.51□□□□□ -1.37
PDE1YGL248W SOH1P38633 127 aa6.51□□□□□ -1.37
PDE1YGL248W HOS4P40480 1083 aa6.51□□□□□ -1.37
PDE1YGL248W YPP1P46951 817 aa6.51□□□□□ -1.37
PDE1YGL248W OYE2Q03558 400 aaKnown RBP6.51□□□□□ -1.37
PDE1YGL248W SYT1Q06836 1226 aa6.51□□□□□ -1.37
PDE1YGL248W GRX4P32642 244 aa6.5□□□□□ -1.37
PDE1YGL248W YKL091CP33324 310 aaKnown RBP6.5□□□□□ -1.37
PDE1YGL248W YML083CQ04526 418 aa6.5□□□□□ -1.37
PDE1YGL248W COG4Q06096 861 aa6.5□□□□□ -1.37
PDE1YGL248W JIP5Q06214 492 aaPredicted RBP6.5□□□□□ -1.37
PDE1YGL248W NKP1Q12493 238 aa6.5□□□□□ -1.37
PDE1YGL248W CIT2P08679 460 aa6.49□□□□□ -1.37
PDE1YGL248W PUP1P25043 261 aa6.49□□□□□ -1.37
PDE1YGL248W BLI1P35727 113 aa6.49□□□□□ -1.37
PDE1YGL248W ALA1P40825 983 aaKnown RBP6.49□□□□□ -1.37
PDE1YGL248W SUM1P46676 1062 aa6.49□□□□□ -1.37
PDE1YGL248W KRE33P53914 1056 aaKnown RBP6.49□□□□□ -1.37
PDE1YGL248W UTP13Q05946 817 aaKnown RBP6.49□□□□□ -1.37
PDE1YGL248W YBL113CQ7M4S9 792 aa6.49□□□□□ -1.37
PDE1YGL248W DPB3P27344 201 aa6.48□□□□□ -1.37
PDE1YGL248W GRX7P38068 203 aa6.48□□□□□ -1.37
PDE1YGL248W YFL066CP43538 392 aa6.48□□□□□ -1.37
PDE1YGL248W ADE12P80210 433 aaKnown RBP6.48□□□□□ -1.37
PDE1YGL248W UBP3Q01477 912 aaKnown RBP RIP-Chip data6.48□□□□□ -1.37 RIP-Chip
PDE1YGL248W YDR461C-AQ2V2P7 80 aa6.48□□□□□ -1.37
PDE1YGL248W ATE1P16639 503 aa6.47□□□□□ -1.37
PDE1YGL248W PWP2P25635 923 aaKnown RBP6.47□□□□□ -1.37
PDE1YGL248W YNL108CP53929 270 aa6.47□□□□□ -1.37
PDE1YGL248W DNM1P54861 757 aa6.47□□□□□ -1.37
PDE1YGL248W ENT2Q05785 613 aa6.47□□□□□ -1.37
PDE1YGL248W MAG2Q06436 670 aaKnown RBP6.47□□□□□ -1.37
PDE1YGL248W HDA3Q06623 655 aa6.47□□□□□ -1.37
PDE1YGL248W ERP4Q12450 207 aa6.47□□□□□ -1.37
PDE1YGL248W YGR161W-CQ3E744 92 aa6.47□□□□□ -1.37
PDE1YGL248W SEC8P32855 1065 aa6.46□□□□□ -1.38
PDE1YGL248W JJJ2P46997 583 aa6.46□□□□□ -1.38
PDE1YGL248W MEH1Q02205 184 aa6.46□□□□□ -1.38
PDE1YGL248W PSH1Q12161 406 aa6.46□□□□□ -1.38
PDE1YGL248W ENO2P00925 437 aaKnown RBP6.45□□□□□ -1.38
PDE1YGL248W SUP45P12385 437 aaKnown RBP6.45□□□□□ -1.38
PDE1YGL248W CAB3P36076 571 aa6.45□□□□□ -1.38
PDE1YGL248W VMS1Q04311 632 aaKnown RBP6.45□□□□□ -1.38
PDE1YGL248W NSE3Q05541 303 aa6.45□□□□□ -1.38
PDE1YGL248W IRE1P32361 1115 aa6.44□□□□□ -1.38
PDE1YGL248W RPN12P32496 274 aa6.44□□□□□ -1.38
PDE1YGL248W VPS24P36095 224 aaKnown RBP6.44□□□□□ -1.38
PDE1YGL248W ERP5P38819 212 aa6.44□□□□□ -1.38
PDE1YGL248W VAC8P39968 578 aa6.44□□□□□ -1.38
PDE1YGL248W TAF13P11747 167 aa6.43□□□□□ -1.38
PDE1YGL248W DAL5P15365 543 aa6.43□□□□□ -1.38
PDE1YGL248W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
PDE1YGL248W SEC6P32844 805 aa6.43□□□□□ -1.38
PDE1YGL248W MGE1P38523 228 aa6.43□□□□□ -1.38
PDE1YGL248W UTP14Q04500 899 aaKnown RBP6.43□□□□□ -1.38
PDE1YGL248W YPR053CQ6Q5F3 151 aa6.43□□□□□ -1.38
PDE1YGL248W TRX2P22803 104 aaKnown RBP6.42□□□□□ -1.38
PDE1YGL248W DEF1P35732 738 aaKnown RBP6.42□□□□□ -1.38
PDE1YGL248W IOC3P43596 787 aa6.42□□□□□ -1.38
PDE1YGL248W YJL049WP47048 450 aa6.42□□□□□ -1.38
PDE1YGL248W RPN4Q03465 531 aa6.42□□□□□ -1.38
PDE1YGL248W CBC2Q08920 208 aaKnown RBP RIP-Chip data6.42□□□□□ -1.38not detected
PDE1YGL248W SSF2Q12153 453 aaPredicted RBP6.42□□□□□ -1.38
PDE1YGL248W STI1P15705 589 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
PDE1YGL248W OPI1P21957 404 aa6.41□□□□□ -1.38
PDE1YGL248W SHM1P37292 490 aaPredicted RBP6.41□□□□□ -1.38
PDE1YGL248W PPX1P38698 397 aa6.41□□□□□ -1.38
PDE1YGL248W YHL050CP38721 697 aa6.41□□□□□ -1.38
PDE1YGL248W YHR219WP38900 624 aa6.41□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms