RNA–Protein interactions for RNA: YDR540C

IRC4, Transcript of Putative protein of unknown function, yeast

Gene IRC4, Length 540 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC4	YDR540C	PDC5	P16467	563 aa	Known RBP	4.29	□□□□□ -1.72
IRC4	YDR540C	NGR1	P32831	672 aa	Known RBP	4.29	□□□□□ -1.72
IRC4	YDR540C	TY1A-DR2	Q03964	440 aa	Known RBP	4.29	□□□□□ -1.72
IRC4	YDR540C	SRS2	P12954	1174 aa		4.28	□□□□□ -1.72
IRC4	YDR540C	TAT1	P38085	619 aa		4.28	□□□□□ -1.72
IRC4	YDR540C	ALD4	P46367	519 aa	Known RBP	4.28	□□□□□ -1.72
IRC4	YDR540C	Q0182	Q9ZZW1	134 aa		4.28	□□□□□ -1.72
IRC4	YDR540C	RGP1	P16664	663 aa		4.27	□□□□□ -1.73
IRC4	YDR540C	YCK2	P23292	546 aa	Known RBP	4.27	□□□□□ -1.73
IRC4	YDR540C	PUN1	Q06991	263 aa		4.27	□□□□□ -1.73
IRC4	YDR540C	HXT5	P38695	592 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	SLN1	P39928	1220 aa	Predicted RBP	4.26	□□□□□ -1.73
IRC4	YDR540C	LSB6	P42951	607 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	CWH41	P53008	833 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	HEH2	Q03281	663 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	CAB1	Q04430	367 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	PNP1	Q05788	311 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	YDR215C	Q12240	137 aa		4.26	□□□□□ -1.73
IRC4	YDR540C	SSF1	P38789	453 aa	Predicted RBP	4.25	□□□□□ -1.73
IRC4	YDR540C	BOL3	P39724	118 aa		4.25	□□□□□ -1.73
IRC4	YDR540C	ALD2	P47771	506 aa		4.25	□□□□□ -1.73
IRC4	YDR540C	YNL165W	P53891	406 aa		4.25	□□□□□ -1.73
IRC4	YDR540C	MLF3	P32047	452 aa		4.24	□□□□□ -1.73
IRC4	YDR540C	SCD5	P34758	872 aa		4.24	□□□□□ -1.73
IRC4	YDR540C	AMN1	P38285	549 aa	Predicted RBP	4.24	□□□□□ -1.73
IRC4	YDR540C	YBR197C	P38306	217 aa		4.24	□□□□□ -1.73
IRC4	YDR540C	UTP4	Q06679	776 aa	Known RBP	4.24	□□□□□ -1.73
IRC4	YDR540C	ISC10	P32645	267 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	MSC7	P38694	644 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	MTO1	P53070	669 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	FOX2	Q02207	900 aa	Known RBP	4.23	□□□□□ -1.73
IRC4	YDR540C	YML020W	Q03722	664 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	KAR5	Q04746	504 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	NOP8	Q08287	484 aa	Predicted RBP	4.23	□□□□□ -1.73
IRC4	YDR540C	NHA1	Q99271	985 aa		4.23	□□□□□ -1.73
IRC4	YDR540C	BOI1	P38041	980 aa	Known RBP	4.22	□□□□□ -1.73
IRC4	YDR540C	NCL1	P38205	684 aa	Known RBP	4.22	□□□□□ -1.73
IRC4	YDR540C	PRY1	P47032	299 aa		4.22	□□□□□ -1.73
IRC4	YDR540C	MCA1	Q08601	432 aa		4.22	□□□□□ -1.73
IRC4	YDR540C	HAT1	Q12341	374 aa		4.22	□□□□□ -1.73
IRC4	YDR540C	LSO1	Q3E827	93 aa		4.22	□□□□□ -1.73
IRC4	YDR540C	MRPL33	P20084	86 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	KAP122	P32767	1081 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	ERP5	P38819	212 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	ATG1	P53104	897 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	YPL034W	Q03083	165 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	APC11	Q12157	165 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	YBL113C	Q7M4S9	792 aa		4.21	□□□□□ -1.74
IRC4	YDR540C	FUR4	P05316	633 aa	Known RBP	4.2	□□□□□ -1.74
IRC4	YDR540C	TRL1	P09880	827 aa	Known RBP	4.2	□□□□□ -1.74
IRC4	YDR540C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
IRC4	YDR540C	RRN6	P32786	894 aa		4.2	□□□□□ -1.74
IRC4	YDR540C	ALG14	P38242	237 aa		4.2	□□□□□ -1.74
IRC4	YDR540C	RPB10	P22139	70 aa		4.19	□□□□□ -1.74
IRC4	YDR540C	KTR2	P33550	425 aa		4.19	□□□□□ -1.74
IRC4	YDR540C	MAC1	P35192	417 aa		4.19	□□□□□ -1.74
IRC4	YDR540C	PGM2	P37012	569 aa	Known RBP	4.19	□□□□□ -1.74
IRC4	YDR540C	SKP1	P52286	194 aa		4.19	□□□□□ -1.74
IRC4	YDR540C	VMA3	P25515	160 aa		4.18	□□□□□ -1.74
IRC4	YDR540C	GRS1	P38088	690 aa	Known RBP	4.18	□□□□□ -1.74
IRC4	YDR540C	APM2	P38700	605 aa		4.18	□□□□□ -1.74
IRC4	YDR540C	QDR1	P40475	563 aa		4.18	□□□□□ -1.74
IRC4	YDR540C	BUD9	P53226	547 aa		4.18	□□□□□ -1.74
IRC4	YDR540C	RPC31	P17890	251 aa		4.17	□□□□□ -1.74
IRC4	YDR540C	GLO3	P38682	493 aa	Known RBP	4.17	□□□□□ -1.74
IRC4	YDR540C	QDR2	P40474	542 aa		4.17	□□□□□ -1.74
IRC4	YDR540C	PRK1	P40494	810 aa		4.17	□□□□□ -1.74
IRC4	YDR540C	MDJ2	P42834	146 aa		4.17	□□□□□ -1.74
IRC4	YDR540C	ACF4	P47129	309 aa		4.17	□□□□□ -1.74
IRC4	YDR540C	SEN54	Q02825	467 aa	Predicted RBP	4.17	□□□□□ -1.74
IRC4	YDR540C	STM1	P39015	273 aa	Known RBP	4.16	□□□□□ -1.74
IRC4	YDR540C	CUS1	Q02554	436 aa	Predicted RBP	4.16	□□□□□ -1.74
IRC4	YDR540C	GLT1	Q12680	2145 aa	Known RBP	4.15	□□□□□ -1.74
IRC4	YDR540C	NAR1	P23503	491 aa	Known RBP	4.15	□□□□□ -1.75
IRC4	YDR540C	LDH1	P38139	375 aa		4.15	□□□□□ -1.75
IRC4	YDR540C	DYS1	P38791	387 aa		4.15	□□□□□ -1.75
IRC4	YDR540C	ALO1	P54783	526 aa	Known RBP	4.15	□□□□□ -1.75
IRC4	YDR540C	SAC7	P17121	654 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	OMA1	P36163	345 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	SUT1	P53032	299 aa	Known RBP	4.14	□□□□□ -1.75
IRC4	YDR540C	YNR040W	P53736	256 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	GIS4	Q04233	774 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	NUT2	Q06213	157 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	YOR296W	Q08748	1289 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	FRT1	Q99332	602 aa		4.14	□□□□□ -1.75
IRC4	YDR540C	BSD2	P38356	321 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	PPX1	P38698	397 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	YHL050C	P38721	697 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	RRM3	P38766	723 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	YHR219W	P38900	624 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	HXT8	P40886	569 aa		4.13	□□□□□ -1.75
IRC4	YDR540C	AI3	P03877	415 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	MSN1	P22148	382 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	SLD2	P34252	453 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	GIP1	P38229	639 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	UFD2	P54860	961 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	TRS120	Q04183	1289 aa		4.12	□□□□□ -1.75
IRC4	YDR540C	MSC6	Q08818	692 aa	Known RBP	4.12	□□□□□ -1.75
IRC4	YDR540C	SEC20	P28791	383 aa		4.11	□□□□□ -1.75
IRC4	YDR540C	SFA1	P32771	386 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 178.5 ms