RNA–Protein interactions for RNA: YDR293C

SSD1, Transcript of Translational repressor with a role in polar growth and wall integrity, yeastyeast

Gene SSD1, Length 3,753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSD1YDR293C NSE3Q05541 303 aa2.71□□□□□ -1.98
SSD1YDR293C ADE6P38972 1358 aaKnown RBP2.71□□□□□ -1.98
SSD1YDR293C NPL4P33755 580 aa2.71□□□□□ -1.98
SSD1YDR293C BOL3P39724 118 aa2.71□□□□□ -1.98
SSD1YDR293C RPS26AP39938 119 aaKnown RBP2.71□□□□□ -1.98
SSD1YDR293C RPS26BP39939 119 aaKnown RBP2.71□□□□□ -1.98
SSD1YDR293C QDR1P40475 563 aa2.71□□□□□ -1.98
SSD1YDR293C MRX10Q05648 414 aa2.71□□□□□ -1.98
SSD1YDR293C APC1P53886 1748 aa2.7□□□□□ -1.98
SSD1YDR293C YEF3P16521 1044 aaKnown RBP2.7□□□□□ -1.98
SSD1YDR293C MDJ2P42834 146 aa2.7□□□□□ -1.98
SSD1YDR293C GYP7P48365 746 aa2.7□□□□□ -1.98
SSD1YDR293C YNR029CP53729 429 aaKnown RBP2.7□□□□□ -1.98
SSD1YDR293C SEC20P28791 383 aa2.7□□□□□ -1.98
SSD1YDR293C VPS24P36095 224 aaKnown RBP2.7□□□□□ -1.98
SSD1YDR293C NNF1P47149 201 aa2.7□□□□□ -1.98
SSD1YDR293C ACS2P52910 683 aaKnown RBP2.7□□□□□ -1.98
SSD1YDR293C MEC3Q02574 474 aa2.7□□□□□ -1.98
SSD1YDR293C TAF13P11747 167 aa2.7□□□□□ -1.98
SSD1YDR293C MSC6Q08818 692 aaKnown RBP2.7□□□□□ -1.98
SSD1YDR293C FRT1Q99332 602 aa2.7□□□□□ -1.98
SSD1YDR293C QCR6P00127 147 aa2.69□□□□□ -1.98
SSD1YDR293C PDR1P12383 1068 aa2.69□□□□□ -1.98
SSD1YDR293C RPC31P17890 251 aa2.69□□□□□ -1.98
SSD1YDR293C YPP1P46951 817 aa2.69□□□□□ -1.98
SSD1YDR293C RVB2Q12464 471 aaKnown RBP2.69□□□□□ -1.98
SSD1YDR293C YOR131CQ12486 218 aa2.69□□□□□ -1.98
SSD1YDR293C NUT2Q06213 157 aa2.69□□□□□ -1.98
SSD1YDR293C AOS1Q06624 347 aa2.69□□□□□ -1.98
SSD1YDR293C YOL036WQ08206 761 aa2.69□□□□□ -1.98
SSD1YDR293C RAD50P12753 1312 aa2.69□□□□□ -1.98
SSD1YDR293C RDS2P19541 446 aaKnown RBP2.69□□□□□ -1.98
SSD1YDR293C PRD1P25375 712 aa2.69□□□□□ -1.98
SSD1YDR293C TUB4P53378 473 aa2.69□□□□□ -1.98
SSD1YDR293C RIA1P53893 1110 aa2.69□□□□□ -1.98
SSD1YDR293C HTA1P04911 132 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C HTA2P04912 132 aa2.68□□□□□ -1.98
SSD1YDR293C TYS1P36421 394 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C YHL008CP38750 627 aa2.68□□□□□ -1.98
SSD1YDR293C ZDS1P50111 915 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C YOL098CQ12496 1037 aa2.68□□□□□ -1.98
SSD1YDR293C RPP1BP10622 106 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C CLC1P17891 233 aa2.68□□□□□ -1.98
SSD1YDR293C HSP104P31539 908 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C PIL1P53252 339 aaKnown RBP2.68□□□□□ -1.98
SSD1YDR293C CAB1Q04430 367 aa2.68□□□□□ -1.98
SSD1YDR293C RPB10P22139 70 aa2.67□□□□□ -1.98
SSD1YDR293C NUG1P40010 520 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C APP1P53933 587 aa2.67□□□□□ -1.98
SSD1YDR293C MAG2Q06436 670 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C BDS1Q08347 646 aa2.67□□□□□ -1.98
SSD1YDR293C MAK16P10962 306 aaPredicted RBP2.67□□□□□ -1.98
SSD1YDR293C KRI1P42846 591 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C PAP2P53632 584 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C PML39Q03760 334 aa2.67□□□□□ -1.98
SSD1YDR293C CBC2Q08920 208 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
SSD1YDR293C DAT1P13483 248 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C KIP2P28743 706 aa2.67□□□□□ -1.98
SSD1YDR293C NUD1P32336 851 aa2.67□□□□□ -1.98
SSD1YDR293C OSH3P38713 996 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C PES4P39684 611 aa2.67□□□□□ -1.98
SSD1YDR293C YEL023CP39992 682 aa2.67□□□□□ -1.98
SSD1YDR293C HYR1P40581 163 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C MNL2Q12205 849 aa2.67□□□□□ -1.98
SSD1YDR293C ROM2P51862 1356 aaKnown RBP2.67□□□□□ -1.98
SSD1YDR293C SUI2P20459 304 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C VAN1P23642 535 aa2.66□□□□□ -1.98
SSD1YDR293C CLB5P30283 435 aa2.66□□□□□ -1.98
SSD1YDR293C GRX7P38068 203 aa2.66□□□□□ -1.98
SSD1YDR293C TIF4632P39936 914 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C TIM54P47045 478 aa2.66□□□□□ -1.98
SSD1YDR293C ISC10P32645 267 aa2.66□□□□□ -1.98
SSD1YDR293C RRP14P36080 434 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C AKL1P38080 1108 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C SNF7P39929 240 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C YEN1P40028 759 aa2.66□□□□□ -1.98
SSD1YDR293C SAP155P43612 1002 aa2.66□□□□□ -1.98
SSD1YDR293C DAN4P47179 1161 aa2.66□□□□□ -1.98
SSD1YDR293C URB1P34241 1764 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C RPS19AP07280 144 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C RPS19BP07281 144 aaPredicted RBP2.66□□□□□ -1.98
SSD1YDR293C KCC4P25389 1037 aa2.66□□□□□ -1.98
SSD1YDR293C SPC110P32380 944 aa2.66□□□□□ -1.98
SSD1YDR293C CSE4P36012 229 aa2.66□□□□□ -1.98
SSD1YDR293C SIS2P36024 562 aa2.66□□□□□ -1.98
SSD1YDR293C ENV11P53246 860 aa2.66□□□□□ -1.98
SSD1YDR293C UBP3Q01477 912 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
SSD1YDR293C ISR1Q06098 443 aaKnown RBP2.66□□□□□ -1.98
SSD1YDR293C CSC1Q06538 782 aa2.66□□□□□ -1.98
SSD1YDR293C NCB2Q92317 146 aa2.66□□□□□ -1.98
SSD1YDR293C CIT2P08679 460 aa2.65□□□□□ -1.98
SSD1YDR293C AIM21P40563 679 aa2.65□□□□□ -1.98
SSD1YDR293C ROM1P53046 1155 aa2.65□□□□□ -1.98
SSD1YDR293C RPL22AP05749 121 aaKnown RBP2.65□□□□□ -1.99
SSD1YDR293C BAS1P22035 811 aa2.65□□□□□ -1.99
SSD1YDR293C MNN1P39106 762 aa2.65□□□□□ -1.99
SSD1YDR293C YIL092WP40497 633 aa2.65□□□□□ -1.99
SSD1YDR293C DSD1P53095 428 aa2.65□□□□□ -1.99
SSD1YDR293C HUL5P53119 910 aa2.65□□□□□ -1.99
SSD1YDR293C PUS6P53294 404 aa2.65□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 67.7 ms