RNA–Protein interactions for RNA: YCR083W

TRX3, Transcript of Mitochondrial thioredoxin, yeast

Gene TRX3, Length 384 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRX3	YCR083W	HAP1	P0CE41	1502 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	MIP1	P15801	1254 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	SLD2	P34252	453 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	APL6	P46682	809 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	ACS2	P52910	683 aa	Known RBP	4.83	□□□□□ -1.64
TRX3	YCR083W	YPL062W	Q02781	134 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	UTP13	Q05946	817 aa	Known RBP	4.83	□□□□□ -1.64
TRX3	YCR083W	PUS5	Q06244	254 aa		4.83	□□□□□ -1.64
TRX3	YCR083W	MLP1	Q02455	1875 aa	Known RBP	4.82	□□□□□ -1.64
TRX3	YCR083W	HAP4	P14064	554 aa		4.82	□□□□□ -1.64
TRX3	YCR083W	PDI1	P17967	522 aa	Known RBP	4.82	□□□□□ -1.64
TRX3	YCR083W	HAL5	P38970	855 aa	Known RBP	4.82	□□□□□ -1.64
TRX3	YCR083W	FRK1	Q03002	865 aa	Predicted RBP	4.82	□□□□□ -1.64
TRX3	YCR083W	MRF1	P30775	413 aa	Predicted RBP	4.81	□□□□□ -1.64
TRX3	YCR083W	TPS3	P38426	1054 aa	Known RBP	4.81	□□□□□ -1.64
TRX3	YCR083W	BDP1	P46678	594 aa		4.81	□□□□□ -1.64
TRX3	YCR083W	ROM1	P53046	1155 aa		4.81	□□□□□ -1.64
TRX3	YCR083W	APP1	P53933	587 aa		4.81	□□□□□ -1.64
TRX3	YCR083W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	not detected
TRX3	YCR083W	BCK1	Q01389	1478 aa		4.81	□□□□□ -1.64
TRX3	YCR083W	DNF3	Q12674	1656 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	AMS1	P22855	1083 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	TAF5	P38129	798 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	KAR5	Q04746	504 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	ATG20	Q07528	640 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	TSC13	Q99190	310 aa		4.8	□□□□□ -1.64
TRX3	YCR083W	ESL2	P36168	1195 aa		4.79	□□□□□ -1.64
TRX3	YCR083W	AIM9	P40053	627 aa	Known RBP	4.79	□□□□□ -1.64
TRX3	YCR083W	ORC1	P54784	914 aa	Predicted RBP	4.79	□□□□□ -1.64
TRX3	YCR083W	GAS4	Q08271	471 aa		4.79	□□□□□ -1.64
TRX3	YCR083W	YBL113C	Q7M4S9	792 aa		4.79	□□□□□ -1.64
TRX3	YCR083W	SDH2	P21801	266 aa		4.78	□□□□□ -1.64
TRX3	YCR083W	PRS1	P32895	427 aa	Known RBP	4.78	□□□□□ -1.64
TRX3	YCR083W	CST6	P40535	587 aa		4.78	□□□□□ -1.64
TRX3	YCR083W	YFL034W	P43564	1073 aa		4.78	□□□□□ -1.64
TRX3	YCR083W	KIP3	P53086	805 aa	Known RBP	4.78	□□□□□ -1.64
TRX3	YCR083W	SYH1	Q02875	849 aa	Known RBP	4.78	□□□□□ -1.64
TRX3	YCR083W	PUF6	Q04373	656 aa	Known RBP	4.78	□□□□□ -1.64
TRX3	YCR083W	HDA3	Q06623	655 aa		4.78	□□□□□ -1.64
TRX3	YCR083W	PUN1	Q06991	263 aa		4.78	□□□□□ -1.64
TRX3	YCR083W	VAN1	P23642	535 aa		4.77	□□□□□ -1.65
TRX3	YCR083W	SEN54	Q02825	467 aa	Predicted RBP	4.77	□□□□□ -1.65
TRX3	YCR083W	CWC15	Q03772	175 aa	Known RBP	4.77	□□□□□ -1.65
TRX3	YCR083W	PDS5	Q04264	1277 aa		4.77	□□□□□ -1.65
TRX3	YCR083W	SNF2	P22082	1703 aa		4.77	□□□□□ -1.65
TRX3	YCR083W	NTH2	P35172	780 aa		4.76	□□□□□ -1.65
TRX3	YCR083W	GRS1	P38088	690 aa	Known RBP	4.76	□□□□□ -1.65
TRX3	YCR083W	ERP5	P38819	212 aa		4.76	□□□□□ -1.65
TRX3	YCR083W	PNP1	Q05788	311 aa		4.76	□□□□□ -1.65
TRX3	YCR083W	SPE2	P21182	396 aa		4.75	□□□□□ -1.65
TRX3	YCR083W	UTR2	P32623	467 aa		4.75	□□□□□ -1.65
TRX3	YCR083W	MKS1	P34072	584 aa		4.75	□□□□□ -1.65
TRX3	YCR083W	TYS1	P36421	394 aa	Known RBP	4.75	□□□□□ -1.65
TRX3	YCR083W	IPL1	P38991	367 aa		4.75	□□□□□ -1.65
TRX3	YCR083W	EMW1	P42842	904 aa	Known RBP	4.75	□□□□□ -1.65
TRX3	YCR083W	TRS33	Q99394	268 aa		4.75	□□□□□ -1.65
TRX3	YCR083W	FUR4	P05316	633 aa	Known RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	RPS6A	P0CX37	236 aa	Known RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	RPS6B	P0CX38	236 aa	Predicted RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	SRS2	P12954	1174 aa		4.74	□□□□□ -1.65
TRX3	YCR083W	DAT1	P13483	248 aa	Known RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	SCT1	P32784	759 aa		4.74	□□□□□ -1.65
TRX3	YCR083W	STM1	P39015	273 aa	Known RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	BOL3	P39724	118 aa		4.74	□□□□□ -1.65
TRX3	YCR083W	TY1B-NL2	Q99337	1749 aa	Known RBP	4.74	□□□□□ -1.65
TRX3	YCR083W	RAD9	P14737	1309 aa		4.73	□□□□□ -1.65
TRX3	YCR083W	CYT1	P07143	309 aa		4.73	□□□□□ -1.65
TRX3	YCR083W	FBP26	P32604	452 aa		4.73	□□□□□ -1.65
TRX3	YCR083W	YAP3	P38749	330 aa		4.73	□□□□□ -1.65
TRX3	YCR083W	ALD4	P46367	519 aa	Known RBP	4.73	□□□□□ -1.65
TRX3	YCR083W	ISU1	Q03020	165 aa		4.73	□□□□□ -1.65
TRX3	YCR083W	URN1	Q06525	465 aa	Known RBP	4.73	□□□□□ -1.65
TRX3	YCR083W	SWI5	P08153	709 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	TBS1	P38114	1094 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	GLO3	P38682	493 aa	Known RBP	4.72	□□□□□ -1.65
TRX3	YCR083W	YHL050C	P38721	697 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	YHR219W	P38900	624 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	DFG5	Q05031	458 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	YML133C	Q03099	1374 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	YLL067C	Q07888	1374 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	YLL066C	Q99208	1374 aa		4.72	□□□□□ -1.65
TRX3	YCR083W	HEM3	P28789	327 aa		4.71	□□□□□ -1.66
TRX3	YCR083W	CWH41	P53008	833 aa		4.71	□□□□□ -1.66
TRX3	YCR083W	FOX2	Q02207	900 aa	Known RBP	4.71	□□□□□ -1.66
TRX3	YCR083W	USO1	P25386	1790 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	CFT1	Q06632	1357 aa	Known RBP	4.7	□□□□□ -1.66
TRX3	YCR083W	SPT2	P06843	333 aa	Predicted RBP	4.7	□□□□□ -1.66
TRX3	YCR083W	TRL1	P09880	827 aa	Known RBP	4.7	□□□□□ -1.66
TRX3	YCR083W	UBP1	P25037	809 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	SEC20	P28791	383 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	SUV3	P32580	737 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	QDR1	P40475	563 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	THI12	P42883	340 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	THI5	P43534	340 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	THI11	P47183	340 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	ATG1	P53104	897 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	TAF8	Q03750	510 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	THI13	Q07748	340 aa		4.7	□□□□□ -1.66
TRX3	YCR083W	RRN6	P32786	894 aa		4.69	□□□□□ -1.66
TRX3	YCR083W	MRT4	P33201	236 aa	Known RBP	4.69	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 39.3 ms