RNA–Protein interactions for RNA: YBR182C

SMP1, Transcript of MADS-box transcription factor involved in osmotic stress response, yeast

Gene SMP1, Length 1,359 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMP1	YBR182C	STB3	Q12427	513 aa		6.72	□□□□□ -1.33
SMP1	YBR182C	SSN3	P39073	555 aa		6.71	□□□□□ -1.33
SMP1	YBR182C	PHM7	Q12252	991 aa		6.71	□□□□□ -1.33
SMP1	YBR182C	GLO3	P38682	493 aa	Known RBP	6.7	□□□□□ -1.34
SMP1	YBR182C	BOL3	P39724	118 aa		6.7	□□□□□ -1.34
SMP1	YBR182C	QDR1	P40475	563 aa		6.7	□□□□□ -1.34
SMP1	YBR182C	ACS2	P52910	683 aa	Known RBP	6.7	□□□□□ -1.34
SMP1	YBR182C	NUT2	Q06213	157 aa		6.7	□□□□□ -1.34
SMP1	YBR182C	DIT1	P21623	536 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	ROM1	P53046	1155 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	RNH70	P53331	553 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	NSG2	P53898	299 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	KRE33	P53914	1056 aa	Known RBP	6.69	□□□□□ -1.34
SMP1	YBR182C	MAG2	Q06436	670 aa	Known RBP	6.69	□□□□□ -1.34
SMP1	YBR182C	HDA3	Q06623	655 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	GAS4	Q08271	471 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	THI72	Q08579	599 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	AI1	P03875	834 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	MET1	P36150	593 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	HAL5	P38970	855 aa	Known RBP	6.69	□□□□□ -1.34
SMP1	YBR182C	SUM1	P46676	1062 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	ADE12	P80210	433 aa	Known RBP	6.69	□□□□□ -1.34
SMP1	YBR182C	TSC13	Q99190	310 aa		6.69	□□□□□ -1.34
SMP1	YBR182C	MDJ1	P35191	511 aa		6.68	□□□□□ -1.34
SMP1	YBR182C	VAN1	P23642	535 aa		6.67	□□□□□ -1.34
SMP1	YBR182C	SRP40	P32583	406 aa	Predicted RBP	6.67	□□□□□ -1.34
SMP1	YBR182C	PPG1	P32838	368 aa		6.67	□□□□□ -1.34
SMP1	YBR182C	RRP14	P36080	434 aa	Known RBP	6.67	□□□□□ -1.34
SMP1	YBR182C	OSW7	P43611	510 aa		6.67	□□□□□ -1.34
SMP1	YBR182C	MET4	P32389	672 aa		6.66	□□□□□ -1.34
SMP1	YBR182C	MNL2	Q12205	849 aa		6.66	□□□□□ -1.34
SMP1	YBR182C	FRT1	Q99332	602 aa		6.66	□□□□□ -1.34
SMP1	YBR182C	TRS33	Q99394	268 aa		6.66	□□□□□ -1.34
SMP1	YBR182C	SLA1	P32790	1244 aa		6.65	□□□□□ -1.35
SMP1	YBR182C	FPR3	P38911	411 aa	Known RBP	6.65	□□□□□ -1.35
SMP1	YBR182C	VAC8	P39968	578 aa		6.65	□□□□□ -1.35
SMP1	YBR182C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.65	□□□□□ -1.35	not detected
SMP1	YBR182C	PDI1	P17967	522 aa	Known RBP	6.64	□□□□□ -1.35
SMP1	YBR182C	IRE1	P32361	1115 aa		6.64	□□□□□ -1.35
SMP1	YBR182C	MAD1	P40957	749 aa		6.64	□□□□□ -1.35
SMP1	YBR182C	YFL034W	P43564	1073 aa		6.64	□□□□□ -1.35
SMP1	YBR182C	LSB3	P43603	459 aa	Known RBP	6.64	□□□□□ -1.35
SMP1	YBR182C	TY1A-DR3	Q12441	440 aa		6.64	□□□□□ -1.35
SMP1	YBR182C	JJJ2	P46997	583 aa		6.63	□□□□□ -1.35
SMP1	YBR182C	RTS3	P53289	263 aa		6.63	□□□□□ -1.35
SMP1	YBR182C	SYT1	Q06836	1226 aa		6.63	□□□□□ -1.35
SMP1	YBR182C	SPR3	P41901	512 aa		6.62	□□□□□ -1.35
SMP1	YBR182C	YDR461C-A	Q2V2P7	80 aa		6.62	□□□□□ -1.35
SMP1	YBR182C	LSO1	Q3E827	93 aa		6.62	□□□□□ -1.35
SMP1	YBR182C	FPS1	P23900	669 aa		6.61	□□□□□ -1.35
SMP1	YBR182C	YKL091C	P33324	310 aa	Known RBP	6.61	□□□□□ -1.35
SMP1	YBR182C	ALD3	P54114	506 aa		6.61	□□□□□ -1.35
SMP1	YBR182C	ALD6	P54115	500 aa	Known RBP	6.61	□□□□□ -1.35
SMP1	YBR182C	RMD1	Q03441	430 aa		6.61	□□□□□ -1.35
SMP1	YBR182C	CLN2	P20438	545 aa		6.6	□□□□□ -1.35
SMP1	YBR182C	NUG1	P40010	520 aa	Known RBP	6.6	□□□□□ -1.35
SMP1	YBR182C	AIM9	P40053	627 aa	Known RBP	6.6	□□□□□ -1.35
SMP1	YBR182C	FYV10	P40492	516 aa		6.6	□□□□□ -1.35
SMP1	YBR182C	YJL049W	P47048	450 aa		6.6	□□□□□ -1.35
SMP1	YBR182C	CWH41	P53008	833 aa		6.6	□□□□□ -1.35
SMP1	YBR182C	WRS1	Q12109	432 aa	Known RBP	6.6	□□□□□ -1.35
SMP1	YBR182C	TRS120	Q04183	1289 aa		6.59	□□□□□ -1.35
SMP1	YBR182C	PIN2	Q12057	282 aa		6.59	□□□□□ -1.35
SMP1	YBR182C	SWI5	P08153	709 aa		6.58	□□□□□ -1.36
SMP1	YBR182C	YFL066C	P43538	392 aa		6.58	□□□□□ -1.36
SMP1	YBR182C	VPS16	Q03308	798 aa		6.58	□□□□□ -1.36
SMP1	YBR182C	MRPL16	P38064	232 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	ATG36	P46983	293 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	CIT2	P08679	460 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	GCD6	P32501	712 aa	Known RBP	6.57	□□□□□ -1.36
SMP1	YBR182C	RPT1	P33299	467 aa	Known RBP	6.57	□□□□□ -1.36
SMP1	YBR182C	TOM20	P35180	183 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	YTA6	P40328	754 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	YJR008W	P47085	338 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	YNR014W	P53719	212 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	ALG12	P53730	551 aa		6.57	□□□□□ -1.36
SMP1	YBR182C	RPP1A	P05318	106 aa	Predicted RBP	6.56	□□□□□ -1.36
SMP1	YBR182C	PHO4	P07270	312 aa	Known RBP	6.56	□□□□□ -1.36
SMP1	YBR182C	STI1	P15705	589 aa	Known RBP RIP-Chip data	6.56	□□□□□ -1.36	not detected
SMP1	YBR182C	MCM2	P29469	868 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	PEP7	P32609	515 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	IOC3	P43596	787 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	SPR28	Q04921	423 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	NSE3	Q05541	303 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	YPR053C	Q6Q5F3	151 aa		6.56	□□□□□ -1.36
SMP1	YBR182C	RPS6A	P0CX37	236 aa	Known RBP	6.55	□□□□□ -1.36
SMP1	YBR182C	RPS6B	P0CX38	236 aa	Predicted RBP	6.55	□□□□□ -1.36
SMP1	YBR182C	NTH2	P35172	780 aa		6.55	□□□□□ -1.36
SMP1	YBR182C	SUB1	P54000	292 aa	Known RBP	6.55	□□□□□ -1.36
SMP1	YBR182C	RPN4	Q03465	531 aa		6.55	□□□□□ -1.36
SMP1	YBR182C	YOR131C	Q12486	218 aa		6.55	□□□□□ -1.36
SMP1	YBR182C	UBP1	P25037	809 aa		6.54	□□□□□ -1.36
SMP1	YBR182C	PDC6	P26263	563 aa	Known RBP	6.54	□□□□□ -1.36
SMP1	YBR182C	SUV3	P32580	737 aa		6.54	□□□□□ -1.36
SMP1	YBR182C	UFD2	P54860	961 aa		6.54	□□□□□ -1.36
SMP1	YBR182C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	6.54	□□□□□ -1.36	not detected
SMP1	YBR182C	POB3	Q04636	552 aa	Known RBP	6.54	□□□□□ -1.36
SMP1	YBR182C	UBX5	Q06682	500 aa		6.54	□□□□□ -1.36
SMP1	YBR182C	GPI13	Q07830	1017 aa		6.54	□□□□□ -1.36
SMP1	YBR182C	TSR4	P25040	408 aa		6.53	□□□□□ -1.36

Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms