RNA–Protein interactions for RNA: ENST00000642102.1

CASC19-280, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 1,351 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-280ENST00000642102 RBM46Q8TBY0 533 aaKnown RBP9.59□□□□□ -0.87
CASC19-280ENST00000642102 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CASC19-280ENST00000642102 BMP1P13497 986 aa9.56□□□□□ -0.88
CASC19-280ENST00000642102 TRIM32Q13049 653 aa9.55□□□□□ -0.88
CASC19-280ENST00000642102 TRIM46Q7Z4K8 759 aa9.55□□□□□ -0.88
CASC19-280ENST00000642102 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
CASC19-280ENST00000642102 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.54□□□□□ -0.88
CASC19-280ENST00000642102 FAM160A2Q8N612 972 aaPredicted RBP9.53□□□□□ -0.88
CASC19-280ENST00000642102 VSIG8P0DPA2 414 aa9.52□□□□□ -0.88
CASC19-280ENST00000642102 THAP11Q96EK4 314 aa9.52□□□□□ -0.88
CASC19-280ENST00000642102 KRTAP9-2Q9BYQ4 174 aa9.52□□□□□ -0.88
CASC19-280ENST00000642102 PSMG3-AS1Q96PY0 264 aa9.51□□□□□ -0.89
CASC19-280ENST00000642102 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
CASC19-280ENST00000642102 DNMT3AQ9Y6K1 912 aaPredicted RBP9.5□□□□□ -0.89
CASC19-280ENST00000642102 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
CASC19-280ENST00000642102 PRDM9Q9NQV7 894 aa9.5□□□□□ -0.89
CASC19-280ENST00000642102 CAPN5O15484 640 aaPredicted RBP9.49□□□□□ -0.89
CASC19-280ENST00000642102 ADAMTS8Q9UP79 889 aa9.49□□□□□ -0.89
CASC19-280ENST00000642102 KRTAP9-6A0A140TA67 174 aa9.48□□□□□ -0.89
CASC19-280ENST00000642102 TSHZ2Q9NRE2 1034 aa9.48□□□□□ -0.89
CASC19-280ENST00000642102 ADGRG1Q9Y653 693 aa9.48□□□□□ -0.89
CASC19-280ENST00000642102 ALDH1A1P00352 501 aa9.47□□□□□ -0.89
CASC19-280ENST00000642102 MORN1Q5T089 497 aa9.47□□□□□ -0.89
CASC19-280ENST00000642102 ARHGEF1Q92888 912 aaKnown RBP9.47□□□□□ -0.89
CASC19-280ENST00000642102 FOXK2Q01167 660 aa9.46□□□□□ -0.9
CASC19-280ENST00000642102 RC3H1Q5TC82 1133 aaKnown RBP9.46□□□□□ -0.9
CASC19-280ENST00000642102 ZFP42Q96MM3 310 aa9.46□□□□□ -0.9
CASC19-280ENST00000642102 FECHP22830 423 aa9.43□□□□□ -0.9
CASC19-280ENST00000642102 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
CASC19-280ENST00000642102 KRTAP1-3Q8IUG1 177 aa9.42□□□□□ -0.9
CASC19-280ENST00000642102 SALL2Q9Y467 1007 aaPredicted RBP9.42□□□□□ -0.9
CASC19-280ENST00000642102 ADAM23O75077 832 aa9.41□□□□□ -0.9
CASC19-280ENST00000642102 MSS51Q4VC12 460 aa9.41□□□□□ -0.9
CASC19-280ENST00000642102 KCNV2Q8TDN2 545 aa9.41□□□□□ -0.9
CASC19-280ENST00000642102 SLC27A5Q9Y2P5 690 aa9.41□□□□□ -0.9
CASC19-280ENST00000642102 IRS1P35568 1242 aa9.4□□□□□ -0.9
CASC19-280ENST00000642102 FAM161AQ3B820 660 aa9.4□□□□□ -0.9
CASC19-280ENST00000642102 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
CASC19-280ENST00000642102 BRICD5Q6PL45 260 aa9.39□□□□□ -0.91
CASC19-280ENST00000642102 WNT7BP56706 349 aa9.37□□□□□ -0.91
CASC19-280ENST00000642102 FUT2Q10981 343 aa9.37□□□□□ -0.91
CASC19-280ENST00000642102 WASF2Q9Y6W5 498 aa9.37□□□□□ -0.91
CASC19-280ENST00000642102 MLLT3P42568 568 aaPredicted RBP9.37□□□□□ -0.91
CASC19-280ENST00000642102 SKOR1P84550 965 aa9.37□□□□□ -0.91
CASC19-280ENST00000642102 P3H3Q8IVL6 736 aa9.37□□□□□ -0.91
CASC19-280ENST00000642102 PTGDRQ13258 359 aa9.36□□□□□ -0.91
CASC19-280ENST00000642102 KANK3Q6NY19 840 aa9.35□□□□□ -0.91
CASC19-280ENST00000642102 SOBPA7XYQ1 873 aa9.34□□□□□ -0.91
CASC19-280ENST00000642102 SCARF1Q14162 830 aa9.33□□□□□ -0.92
CASC19-280ENST00000642102 MMP16P51512 607 aa9.32□□□□□ -0.92
CASC19-280ENST00000642102 RNF19BQ6ZMZ0 732 aa9.31□□□□□ -0.92
CASC19-280ENST00000642102 RDH13Q8NBN7 331 aa9.31□□□□□ -0.92
CASC19-280ENST00000642102 SIAH2O43255 324 aa9.3□□□□□ -0.92
CASC19-280ENST00000642102 MRPL14Q6P1L8 145 aaKnown RBP9.3□□□□□ -0.92
CASC19-280ENST00000642102 MSTNO14793 375 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 PPFIA3O75145 1194 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 PLCB2Q00722 1185 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 CCDC24Q8N4L8 307 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 SVOPQ8N4V2 548 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 CNTNAP3BQ96NU0 1288 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
CASC19-280ENST00000642102 CNTNAP3Q9BZ76 1288 aa9.29□□□□□ -0.92
CASC19-280ENST00000642102 OATP04181 439 aa9.27□□□□□ -0.93
CASC19-280ENST00000642102 MARSP56192 900 aaKnown RBP9.27□□□□□ -0.93
CASC19-280ENST00000642102 KRT76Q01546 638 aa9.27□□□□□ -0.93
CASC19-280ENST00000642102 ZNF385CQ66K41 422 aaPredicted RBP9.27□□□□□ -0.93
CASC19-280ENST00000642102 Q8N3U1 123 aa9.27□□□□□ -0.93
CASC19-280ENST00000642102 EHBP1Q8NDI1 1231 aa9.27□□□□□ -0.93
CASC19-280ENST00000642102 PXYLP1Q8TE99 480 aa9.26□□□□□ -0.93
CASC19-280ENST00000642102 SCARF2Q96GP6 870 aaPredicted RBP9.25□□□□□ -0.93
CASC19-280ENST00000642102 SEMA3EO15041 775 aa9.24□□□□□ -0.93
CASC19-280ENST00000642102 MAN1A2O60476 641 aa9.24□□□□□ -0.93
CASC19-280ENST00000642102 NUTM2FA1L443 756 aa9.24□□□□□ -0.93
CASC19-280ENST00000642102 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
CASC19-280ENST00000642102 Q3C1V9 767 aa9.23□□□□□ -0.93
CASC19-280ENST00000642102 LCE3BQ5TA77 95 aa9.23□□□□□ -0.93
CASC19-280ENST00000642102 FCHSD2O94868 740 aa9.22□□□□□ -0.93
CASC19-280ENST00000642102 GCGRP47871 477 aa9.22□□□□□ -0.93
CASC19-280ENST00000642102 GRIPAP1Q4V328 841 aa9.22□□□□□ -0.93
CASC19-280ENST00000642102 GPR161Q8N6U8 529 aaKnown RBP9.21□□□□□ -0.94
CASC19-280ENST00000642102 SPOCK3Q9BQ16 436 aa9.21□□□□□ -0.94
CASC19-280ENST00000642102 DDX11L8A8MPP1 907 aa9.2□□□□□ -0.94
CASC19-280ENST00000642102 ARHGEF15O94989 841 aa9.2□□□□□ -0.94
CASC19-280ENST00000642102 DAXXQ9UER7 740 aaPredicted RBP9.2□□□□□ -0.94
CASC19-280ENST00000642102 PLA2G4EQ3MJ16 856 aa9.19□□□□□ -0.94
CASC19-280ENST00000642102 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
CASC19-280ENST00000642102 SMYD5Q6GMV2 418 aa9.18□□□□□ -0.94
CASC19-280ENST00000642102 USB1Q9BQ65 265 aaKnown RBP9.18□□□□□ -0.94
CASC19-280ENST00000642102 K7ELQ4 463 aaPredicted RBP9.17□□□□□ -0.94
CASC19-280ENST00000642102 COL25A1Q9BXS0 654 aaPredicted RBP9.17□□□□□ -0.94
CASC19-280ENST00000642102 METTL3Q86U44 580 aaKnown RBP9.16□□□□□ -0.94
CASC19-280ENST00000642102 GALNT6Q8NCL4 622 aa9.16□□□□□ -0.94
CASC19-280ENST00000642102 WHAMMQ8TF30 809 aa9.16□□□□□ -0.94
CASC19-280ENST00000642102 HIC1Q14526 733 aa9.15□□□□□ -0.94
CASC19-280ENST00000642102 TIMP2P16035 220 aa9.13□□□□□ -0.95
CASC19-280ENST00000642102 WDR4P57081 412 aaKnown RBP9.13□□□□□ -0.95
CASC19-280ENST00000642102 NNTQ13423 1086 aa9.13□□□□□ -0.95
CASC19-280ENST00000642102 ADH1CP00326 375 aa9.12□□□□□ -0.95
CASC19-280ENST00000642102 RBM26Q5T8P6 1007 aaKnown RBP9.12□□□□□ -0.95
CASC19-280ENST00000642102 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms