RNA–Protein interactions for RNA: ENST00000640209.1

NECAP1-225, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,473 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-225ENST00000640209 SAFB2Q14151 953 aaKnown RBP eCLIP12.29□□□□□ -0.44
NECAP1-225ENST00000640209 NOP58Q9Y2X3 529 aaKnown RBP12.29□□□□□ -0.44
NECAP1-225ENST00000640209 POLR3AO14802 1390 aaPredicted RBP12.29□□□□□ -0.44
NECAP1-225ENST00000640209 TULP4Q9NRJ4 1543 aa12.28□□□□□ -0.44
NECAP1-225ENST00000640209 PDE4AP27815 886 aa12.28□□□□□ -0.44
NECAP1-225ENST00000640209 SHPRHQ149N8 1683 aa12.28□□□□□ -0.44
NECAP1-225ENST00000640209 BCAR3O75815 825 aa12.28□□□□□ -0.44
NECAP1-225ENST00000640209 ARHGEF28Q8N1W1 1705 aaKnown RBP12.27□□□□□ -0.44
NECAP1-225ENST00000640209 EIF5BO60841 1220 aaKnown RBP12.27□□□□□ -0.45
NECAP1-225ENST00000640209 CABP2Q9NPB3 220 aa12.27□□□□□ -0.45
NECAP1-225ENST00000640209 KDM2BQ8NHM5 1336 aa12.27□□□□□ -0.45
NECAP1-225ENST00000640209 VGFO15240 615 aaPredicted RBP12.27□□□□□ -0.45
NECAP1-225ENST00000640209 IPO9Q96P70 1041 aaKnown RBP12.27□□□□□ -0.45
NECAP1-225ENST00000640209 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
NECAP1-225ENST00000640209 CYB5RLQ6IPT4 315 aa12.26□□□□□ -0.45
NECAP1-225ENST00000640209 BACH2Q9BYV9 841 aa12.26□□□□□ -0.45
NECAP1-225ENST00000640209 STK26Q9P289 416 aa12.26□□□□□ -0.45
NECAP1-225ENST00000640209 ANP32AP39687 249 aaKnown RBP12.26□□□□□ -0.45
NECAP1-225ENST00000640209 RRP7AQ9Y3A4 280 aaKnown RBP12.26□□□□□ -0.45
NECAP1-225ENST00000640209 NKTRP30414 1462 aaKnown RBP12.25□□□□□ -0.45
NECAP1-225ENST00000640209 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
NECAP1-225ENST00000640209 FBXO31Q5XUX0 539 aaPredicted RBP12.25□□□□□ -0.45
NECAP1-225ENST00000640209 NPM2Q86SE8 214 aaKnown RBP12.25□□□□□ -0.45
NECAP1-225ENST00000640209 E9PSI1 815 aa12.25□□□□□ -0.45
NECAP1-225ENST00000640209 MTHFSP49914 203 aa12.25□□□□□ -0.45
NECAP1-225ENST00000640209 WWC1Q8IX03 1113 aa12.25□□□□□ -0.45
NECAP1-225ENST00000640209 NEUROD2Q15784 382 aa12.24□□□□□ -0.45
NECAP1-225ENST00000640209 EVC2Q86UK5 1308 aa12.24□□□□□ -0.45
NECAP1-225ENST00000640209 MS4A1P11836 297 aa12.23□□□□□ -0.45
NECAP1-225ENST00000640209 CGNL1Q0VF96 1302 aa12.22□□□□□ -0.45
NECAP1-225ENST00000640209 USP32Q8NFA0 1604 aa12.22□□□□□ -0.45
NECAP1-225ENST00000640209 ANKRD36BQ8N2N9 1353 aa12.22□□□□□ -0.45
NECAP1-225ENST00000640209 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
NECAP1-225ENST00000640209 PREX1Q8TCU6 1659 aa12.21□□□□□ -0.45
NECAP1-225ENST00000640209 KCNA4P22459 653 aa12.21□□□□□ -0.45
NECAP1-225ENST00000640209 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
NECAP1-225ENST00000640209 SLC52A1Q9NWF4 448 aa12.21□□□□□ -0.45
NECAP1-225ENST00000640209 IQSEC2Q5JU85 1478 aa12.21□□□□□ -0.45
NECAP1-225ENST00000640209 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.21□□□□□ -0.45
NECAP1-225ENST00000640209 ZFYVE9O95405 1425 aa12.21□□□□□ -0.46
NECAP1-225ENST00000640209 RUNDC1Q96C34 613 aa12.2□□□□□ -0.46
NECAP1-225ENST00000640209 PUS7Q96PZ0 661 aaKnown RBP12.2□□□□□ -0.46
NECAP1-225ENST00000640209 PTPRMP28827 1452 aa12.2□□□□□ -0.46
NECAP1-225ENST00000640209 A0A1W2PP64 1363 aa12.2□□□□□ -0.46
NECAP1-225ENST00000640209 MINK1Q8N4C8 1332 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-225ENST00000640209 FAM69CQ0P6D2 419 aa12.19□□□□□ -0.46
NECAP1-225ENST00000640209 CENPQQ7L2Z9 268 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-225ENST00000640209 PRAM1Q96QH2 718 aa12.19□□□□□ -0.46
NECAP1-225ENST00000640209 ZBTB47Q9UFB7 747 aaPredicted RBP12.19□□□□□ -0.46
NECAP1-225ENST00000640209 SRPK2P78362 688 aaKnown RBP12.18□□□□□ -0.46
NECAP1-225ENST00000640209 NBR1Q14596 966 aa12.18□□□□□ -0.46
NECAP1-225ENST00000640209 GGNBP2Q9H3C7 697 aa12.18□□□□□ -0.46
NECAP1-225ENST00000640209 NGEFQ8N5V2 710 aa12.18□□□□□ -0.46
NECAP1-225ENST00000640209 PANK1Q8TE04 598 aa12.18□□□□□ -0.46
NECAP1-225ENST00000640209 TNNQ9UQP3 1299 aa12.17□□□□□ -0.46
NECAP1-225ENST00000640209 YTHDC2Q9H6S0 1430 aaKnown RBP12.17□□□□□ -0.46
NECAP1-225ENST00000640209 IGHDP01880 384 aa12.16□□□□□ -0.46
NECAP1-225ENST00000640209 CD163L1Q9NR16 1453 aa12.16□□□□□ -0.46
NECAP1-225ENST00000640209 U2AF1L5P0DN76 240 aaPredicted RBP12.16□□□□□ -0.46
NECAP1-225ENST00000640209 U2AF1Q01081 240 aaKnown RBP eCLIP12.16□□□□□ -0.46
NECAP1-225ENST00000640209 CFAP53Q96M91 514 aa12.16□□□□□ -0.46
NECAP1-225ENST00000640209 ABCC11Q96J66 1382 aa12.16□□□□□ -0.46
NECAP1-225ENST00000640209 TSPOAP1O95153 1857 aa12.16□□□□□ -0.46
NECAP1-225ENST00000640209 COG6Q9Y2V7 657 aa12.15□□□□□ -0.46
NECAP1-225ENST00000640209 NSD2O96028 1365 aa12.15□□□□□ -0.46
NECAP1-225ENST00000640209 RARSP54136 660 aaKnown RBP12.15□□□□□ -0.46
NECAP1-225ENST00000640209 POGKQ9P215 609 aa12.15□□□□□ -0.46
NECAP1-225ENST00000640209 ALKQ9UM73 1620 aa12.15□□□□□ -0.47
NECAP1-225ENST00000640209 DIP2BQ9P265 1576 aa12.14□□□□□ -0.47
NECAP1-225ENST00000640209 FYB1O15117 783 aa12.14□□□□□ -0.47
NECAP1-225ENST00000640209 RGS3P49796 1198 aa12.14□□□□□ -0.47
NECAP1-225ENST00000640209 FRAT1Q92837 279 aaPredicted RBP12.14□□□□□ -0.47
NECAP1-225ENST00000640209 BCL2L13Q9BXK5 485 aa12.14□□□□□ -0.47
NECAP1-225ENST00000640209 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
NECAP1-225ENST00000640209 RLBP1P12271 317 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 WDR63Q8IWG1 891 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 NLRP1Q9C000 1473 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 RIMBP3CA6NJZ7 1639 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 RIMBP3BA6NNM3 1639 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 RIMBP3Q9UFD9 1639 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 MLECQ14165 292 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 PDE3AQ14432 1141 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 CDK19Q9BWU1 502 aa12.13□□□□□ -0.47
NECAP1-225ENST00000640209 COL3A1P02461 1466 aaPredicted RBP12.13□□□□□ -0.47
NECAP1-225ENST00000640209 CCDC27Q2M243 656 aa12.12□□□□□ -0.47
NECAP1-225ENST00000640209 WAPLQ7Z5K2 1190 aa12.12□□□□□ -0.47
NECAP1-225ENST00000640209 CANXP27824 592 aaKnown RBP12.12□□□□□ -0.47
NECAP1-225ENST00000640209 PLEKHF1Q96S99 279 aa12.12□□□□□ -0.47
NECAP1-225ENST00000640209 CABP1Q9NZU7 370 aa12.12□□□□□ -0.47
NECAP1-225ENST00000640209 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
NECAP1-225ENST00000640209 ARHGEF40Q8TER5 1519 aa12.11□□□□□ -0.47
NECAP1-225ENST00000640209 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
NECAP1-225ENST00000640209 FBLN1P23142 703 aa12.11□□□□□ -0.47
NECAP1-225ENST00000640209 ADGRB2O60241 1585 aa12.11□□□□□ -0.47
NECAP1-225ENST00000640209 ATAD2Q6PL18 1390 aa12.11□□□□□ -0.47
NECAP1-225ENST00000640209 NINLQ9Y2I6 1382 aa12.11□□□□□ -0.47
NECAP1-225ENST00000640209 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
NECAP1-225ENST00000640209 TSR2Q969E8 191 aaKnown RBP12.1□□□□□ -0.47
NECAP1-225ENST00000640209 CLUAP1Q96AJ1 413 aa12.1□□□□□ -0.47
NECAP1-225ENST00000640209 A2ML1A8K2U0 1454 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms