RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 BAZ1BQ9UIG0 1483 aaKnown RBP10.74□□□□□ -0.69
ATM-229ENST00000639953 RSF1Q96T23 1441 aaPredicted RBP10.74□□□□□ -0.69
ATM-229ENST00000639953 HLA-CQ95604 372 aa10.73□□□□□ -0.69
ATM-229ENST00000639953 TNFRSF10AO00220 468 aa10.72□□□□□ -0.69
ATM-229ENST00000639953 GDF9O60383 454 aa10.72□□□□□ -0.69
ATM-229ENST00000639953 LMOD2Q6P5Q4 547 aa10.72□□□□□ -0.69
ATM-229ENST00000639953 FCF1Q9Y324 198 aaKnown RBP10.72□□□□□ -0.69
ATM-229ENST00000639953 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
ATM-229ENST00000639953 KDM4AO75164 1064 aa10.71□□□□□ -0.69
ATM-229ENST00000639953 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
ATM-229ENST00000639953 REPIN1Q9BWE0 567 aaKnown RBP10.7□□□□□ -0.7
ATM-229ENST00000639953 PRR20EP86478 221 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 PRR20CP86479 221 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 PRR20DP86480 221 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 PRR20BP86481 221 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 PRR20AP86496 221 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 FOXC1Q12948 553 aa10.68□□□□□ -0.7
ATM-229ENST00000639953 KRI1Q8N9T8 703 aaKnown RBP10.68□□□□□ -0.7
ATM-229ENST00000639953 GUCA2AQ02747 115 aa10.67□□□□□ -0.7
ATM-229ENST00000639953 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
ATM-229ENST00000639953 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
ATM-229ENST00000639953 PKD2L1Q9P0L9 805 aa10.67□□□□□ -0.7
ATM-229ENST00000639953 CLCN1P35523 988 aa10.65□□□□□ -0.7
ATM-229ENST00000639953 RPIAP49247 311 aa10.65□□□□□ -0.7
ATM-229ENST00000639953 MYT1Q01538 1121 aa10.65□□□□□ -0.7
ATM-229ENST00000639953 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
ATM-229ENST00000639953 PKDCCQ504Y2 493 aa10.65□□□□□ -0.7
ATM-229ENST00000639953 DGAT1O75907 488 aa10.64□□□□□ -0.71
ATM-229ENST00000639953 CD2BP2O95400 341 aaKnown RBP10.64□□□□□ -0.71
ATM-229ENST00000639953 Q3C1V9 767 aa10.64□□□□□ -0.71
ATM-229ENST00000639953 BARGINQ6ZT62 677 aa10.64□□□□□ -0.71
ATM-229ENST00000639953 ZC3H15Q8WU90 426 aaKnown RBP10.64□□□□□ -0.71
ATM-229ENST00000639953 HOXA2O43364 376 aa10.63□□□□□ -0.71
ATM-229ENST00000639953 ZMYND10O75800 440 aa10.63□□□□□ -0.71
ATM-229ENST00000639953 ZNF787Q6DD87 383 aa10.63□□□□□ -0.71
ATM-229ENST00000639953 SYMPKQ92797 1274 aaKnown RBP10.63□□□□□ -0.71
ATM-229ENST00000639953 USB1Q9BQ65 265 aaKnown RBP10.63□□□□□ -0.71
ATM-229ENST00000639953 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
ATM-229ENST00000639953 TOP2AP11388 1531 aaKnown RBP10.62□□□□□ -0.71
ATM-229ENST00000639953 SSTR3P32745 418 aaPredicted RBP10.61□□□□□ -0.71
ATM-229ENST00000639953 USP46P62068 366 aa10.61□□□□□ -0.71
ATM-229ENST00000639953 NESP48681 1621 aa10.61□□□□□ -0.71
ATM-229ENST00000639953 ZBTB24O43167 697 aaPredicted RBP10.6□□□□□ -0.71
ATM-229ENST00000639953 MMP16P51512 607 aa10.6□□□□□ -0.71
ATM-229ENST00000639953 NUTM1Q86Y26 1132 aa10.6□□□□□ -0.71
ATM-229ENST00000639953 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
ATM-229ENST00000639953 POTECB2RU33 542 aa10.58□□□□□ -0.72
ATM-229ENST00000639953 DXOO77932 396 aaKnown RBP10.57□□□□□ -0.72
ATM-229ENST00000639953 CCDC24Q8N4L8 307 aa10.57□□□□□ -0.72
ATM-229ENST00000639953 SPIRE2Q8WWL2 714 aa10.56□□□□□ -0.72
ATM-229ENST00000639953 TOR4AQ9NXH8 423 aa10.56□□□□□ -0.72
ATM-229ENST00000639953 PCDHGC3Q9UN70 934 aa10.56□□□□□ -0.72
ATM-229ENST00000639953 ST8SIA5O15466 376 aa10.55□□□□□ -0.72
ATM-229ENST00000639953 NDUFV2P19404 249 aa10.54□□□□□ -0.72
ATM-229ENST00000639953 TTLL12Q14166 644 aaPredicted RBP10.54□□□□□ -0.72
ATM-229ENST00000639953 CYP4X1Q8N118 509 aa10.54□□□□□ -0.72
ATM-229ENST00000639953 FDX1P10109 184 aa10.53□□□□□ -0.72
ATM-229ENST00000639953 TRIM32Q13049 653 aa10.53□□□□□ -0.72
ATM-229ENST00000639953 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
ATM-229ENST00000639953 LAMC3Q9Y6N6 1575 aa10.52□□□□□ -0.72
ATM-229ENST00000639953 AMHR2Q16671 573 aa10.52□□□□□ -0.73
ATM-229ENST00000639953 DACH1Q9UI36 760 aa10.52□□□□□ -0.73
ATM-229ENST00000639953 CCDC88BA6NC98 1476 aa10.51□□□□□ -0.73
ATM-229ENST00000639953 MOXD2PA6NHM9 499 aa10.51□□□□□ -0.73
ATM-229ENST00000639953 GIGYF2Q6Y7W6 1299 aaKnown RBP10.51□□□□□ -0.73
ATM-229ENST00000639953 ERCC6Q03468 1493 aa10.5□□□□□ -0.73
ATM-229ENST00000639953 JUNDP17535 347 aa10.5□□□□□ -0.73
ATM-229ENST00000639953 ZNF775Q96BV0 537 aaPredicted RBP10.5□□□□□ -0.73
ATM-229ENST00000639953 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
ATM-229ENST00000639953 TTC24A2A3L6 582 aaPredicted RBP10.49□□□□□ -0.73
ATM-229ENST00000639953 C6orf229H3BNL8 230 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 WNT7AO00755 349 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 SKOR1P84550 965 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 PTCRAQ6ISU1 281 aaPredicted RBP10.49□□□□□ -0.73
ATM-229ENST00000639953 RETREG3Q86VR2 466 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 MRGPRX2Q96LB1 330 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 KIF21AQ7Z4S6 1674 aa10.49□□□□□ -0.73
ATM-229ENST00000639953 TRIM66O15016 1216 aa10.48□□□□□ -0.73
ATM-229ENST00000639953 BEGAINQ9BUH8 593 aa10.48□□□□□ -0.73
ATM-229ENST00000639953 J3QL48 77 aa10.46□□□□□ -0.73
ATM-229ENST00000639953 AVPP01185 164 aa10.46□□□□□ -0.73
ATM-229ENST00000639953 PARP9Q8IXQ6 854 aa10.46□□□□□ -0.73
ATM-229ENST00000639953 MS4A1P11836 297 aa10.45□□□□□ -0.74
ATM-229ENST00000639953 SMPD1P17405 629 aa10.45□□□□□ -0.74
ATM-229ENST00000639953 RC3H1Q5TC82 1133 aaKnown RBP10.45□□□□□ -0.74
ATM-229ENST00000639953 SNIP1Q8TAD8 396 aaKnown RBP10.45□□□□□ -0.74
ATM-229ENST00000639953 NUDT12Q9BQG2 462 aa10.45□□□□□ -0.74
ATM-229ENST00000639953 CFTRP13569 1480 aa10.44□□□□□ -0.74
ATM-229ENST00000639953 AK7Q96M32 723 aa10.44□□□□□ -0.74
ATM-229ENST00000639953 PDS5BQ9NTI5 1447 aa10.43□□□□□ -0.74
ATM-229ENST00000639953 AXIN1O15169 862 aa10.43□□□□□ -0.74
ATM-229ENST00000639953 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
ATM-229ENST00000639953 PCDHB15Q9Y5E8 787 aa10.43□□□□□ -0.74
ATM-229ENST00000639953 THOC2Q8NI27 1593 aaKnown RBP10.41□□□□□ -0.74
ATM-229ENST00000639953 CRIPAKQ8N1N5 446 aa10.41□□□□□ -0.74
ATM-229ENST00000639953 PRR7Q8TB68 274 aa10.41□□□□□ -0.74
ATM-229ENST00000639953 PRDM2Q13029 1718 aa10.41□□□□□ -0.74
ATM-229ENST00000639953 SLC24A3Q9HC58 644 aa10.4□□□□□ -0.74
ATM-229ENST00000639953 FANCD2Q9BXW9 1451 aa10.4□□□□□ -0.74
ATM-229ENST00000639953 HPS1Q92902 700 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms