RNA–Protein interactions for RNA: ENST00000639257.1

SPIN3-220, Transcript of spindlin family member 3, humanhuman

TSL 3

Gene SPIN3, Length 1,009 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-220ENST00000639257 NHSL1Q5SYE7 1610 aa25.96■■□□□ 1.75
SPIN3-220ENST00000639257 SIN3AQ96ST3 1273 aa25.96■■□□□ 1.75
SPIN3-220ENST00000639257 MED1Q15648 1581 aaPredicted RBP25.94■■□□□ 1.74
SPIN3-220ENST00000639257 L3MBTL2Q969R5 705 aa25.92■■□□□ 1.74
SPIN3-220ENST00000639257 FMN2Q9NZ56 1722 aa25.91■■□□□ 1.74
SPIN3-220ENST00000639257 ADGRB2O60241 1585 aa25.9■■□□□ 1.74
SPIN3-220ENST00000639257 ARHGEF28Q8N1W1 1705 aaKnown RBP25.88■■□□□ 1.73
SPIN3-220ENST00000639257 PRAM1Q96QH2 718 aa25.87■■□□□ 1.73
SPIN3-220ENST00000639257 JCADQ9P266 1359 aa25.86■■□□□ 1.73
SPIN3-220ENST00000639257 DISP3Q9P2K9 1392 aa25.84■■□□□ 1.73
SPIN3-220ENST00000639257 TRAK1Q9UPV9 953 aa25.84■■□□□ 1.73
SPIN3-220ENST00000639257 SHPRHQ149N8 1683 aa25.83■■□□□ 1.73
SPIN3-220ENST00000639257 ORAI2Q96SN7 254 aa25.83■■□□□ 1.73
SPIN3-220ENST00000639257 TRPM1Q7Z4N2 1603 aa25.81■■□□□ 1.72
SPIN3-220ENST00000639257 NEUROD1Q13562 356 aa25.81■■□□□ 1.72
SPIN3-220ENST00000639257 NBPF1Q3BBV0 1214 aa25.81■■□□□ 1.72
SPIN3-220ENST00000639257 SOS2Q07890 1332 aaPredicted RBP25.8■■□□□ 1.72
SPIN3-220ENST00000639257 POGKQ9P215 609 aa25.78■■□□□ 1.72
SPIN3-220ENST00000639257 USP32Q8NFA0 1604 aa25.77■■□□□ 1.72
SPIN3-220ENST00000639257 ANKARQ7Z5J8 1434 aa25.77■■□□□ 1.72
SPIN3-220ENST00000639257 KIF1AQ12756 1690 aa25.76■■□□□ 1.71
SPIN3-220ENST00000639257 PXDNQ92626 1479 aa25.75■■□□□ 1.71
SPIN3-220ENST00000639257 SPATA31A6Q5VVP1 1343 aa25.75■■□□□ 1.71
SPIN3-220ENST00000639257 SAFB2Q14151 953 aaKnown RBP eCLIP25.75■■□□□ 1.71
SPIN3-220ENST00000639257 DDX17Q92841 729 aaKnown RBP25.75■■□□□ 1.71
SPIN3-220ENST00000639257 GPRASP1Q5JY77 1395 aa25.73■■□□□ 1.71
SPIN3-220ENST00000639257 ESCO1Q5FWF5 840 aa25.73■■□□□ 1.71
SPIN3-220ENST00000639257 LRRC59Q96AG4 307 aaKnown RBP25.73■■□□□ 1.71
SPIN3-220ENST00000639257 RGPD8O14715 1765 aaPredicted RBP25.73■■□□□ 1.71
SPIN3-220ENST00000639257 LRP6O75581 1613 aa25.72■■□□□ 1.71
SPIN3-220ENST00000639257 TULP4Q9NRJ4 1543 aa25.72■■□□□ 1.71
SPIN3-220ENST00000639257 PNPLA6Q8IY17 1366 aa25.71■■□□□ 1.71
SPIN3-220ENST00000639257 NPHP3Q7Z494 1330 aa25.71■■□□□ 1.71
SPIN3-220ENST00000639257 NBPF8Q3BBV2 869 aa25.71■■□□□ 1.71
SPIN3-220ENST00000639257 PCGF6Q9BYE7 350 aa25.7■■□□□ 1.7
SPIN3-220ENST00000639257 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
SPIN3-220ENST00000639257 TONSLQ96HA7 1378 aa25.69■■□□□ 1.7
SPIN3-220ENST00000639257 MINK1Q8N4C8 1332 aaPredicted RBP25.69■■□□□ 1.7
SPIN3-220ENST00000639257 NUTM2FA1L443 756 aa25.69■■□□□ 1.7
SPIN3-220ENST00000639257 WASLO00401 505 aaPredicted RBP25.69■■□□□ 1.7
SPIN3-220ENST00000639257 CLSPNQ9HAW4 1339 aa25.68■■□□□ 1.7
SPIN3-220ENST00000639257 PRR36Q9H6K5 1346 aa25.67■■□□□ 1.7
SPIN3-220ENST00000639257 COL22A1Q8NFW1 1626 aaPredicted RBP25.67■■□□□ 1.7
SPIN3-220ENST00000639257 HIRIP3Q9BW71 556 aaPredicted RBP25.67■■□□□ 1.7
SPIN3-220ENST00000639257 RGS17Q9UGC6 210 aaPredicted RBP25.66■■□□□ 1.7
SPIN3-220ENST00000639257 ATP7BP35670 1465 aa25.66■■□□□ 1.7
SPIN3-220ENST00000639257 FOXO3O43524 673 aa25.65■■□□□ 1.7
SPIN3-220ENST00000639257 ILDR2Q71H61 639 aa25.65■■□□□ 1.7
SPIN3-220ENST00000639257 RALGAPBQ86X10 1494 aa25.65■■□□□ 1.7
SPIN3-220ENST00000639257 PHF8Q9UPP1 1060 aa25.64■■□□□ 1.7
SPIN3-220ENST00000639257 ROCK2O75116 1388 aaKnown RBP25.64■■□□□ 1.69
SPIN3-220ENST00000639257 CENPJQ9HC77 1338 aaPredicted RBP25.63■■□□□ 1.69
SPIN3-220ENST00000639257 QRICH2Q9H0J4 1663 aa25.61■■□□□ 1.69
SPIN3-220ENST00000639257 TOPAZ1Q8N9V7 1692 aa25.61■■□□□ 1.69
SPIN3-220ENST00000639257 PHF23Q9BUL5 403 aaPredicted RBP25.59■■□□□ 1.69
SPIN3-220ENST00000639257 ITSN1Q15811 1721 aa25.59■■□□□ 1.69
SPIN3-220ENST00000639257 CDK19Q9BWU1 502 aa25.57■■□□□ 1.68
SPIN3-220ENST00000639257 SPATA31A3Q5VYP0 1347 aa25.57■■□□□ 1.68
SPIN3-220ENST00000639257 SBNO1A3KN83 1393 aa25.56■■□□□ 1.68
SPIN3-220ENST00000639257 TRPM3Q9HCF6 1732 aaPredicted RBP25.56■■□□□ 1.68
SPIN3-220ENST00000639257 XPCQ01831 940 aaPredicted RBP25.55■■□□□ 1.68
SPIN3-220ENST00000639257 KRT28Q7Z3Y7 464 aa25.55■■□□□ 1.68
SPIN3-220ENST00000639257 NUDT16Q96DE0 195 aaKnown RBP25.55■■□□□ 1.68
SPIN3-220ENST00000639257 TIMELESSQ9UNS1 1208 aa25.55■■□□□ 1.68
SPIN3-220ENST00000639257 SBNO2Q9Y2G9 1366 aa25.54■■□□□ 1.68
SPIN3-220ENST00000639257 TNS3Q68CZ2 1445 aa25.54■■□□□ 1.68
SPIN3-220ENST00000639257 PMFBP1Q8TBY8 1022 aa25.52■■□□□ 1.68
SPIN3-220ENST00000639257 POLR3AO14802 1390 aaPredicted RBP25.52■■□□□ 1.68
SPIN3-220ENST00000639257 PSME1Q06323 249 aa25.5■■□□□ 1.67
SPIN3-220ENST00000639257 CCDC61Q9Y6R9 512 aa25.5■■□□□ 1.67
SPIN3-220ENST00000639257 ALS2Q96Q42 1657 aa25.49■■□□□ 1.67
SPIN3-220ENST00000639257 PLEKHG3A1L390 1219 aa25.49■■□□□ 1.67
SPIN3-220ENST00000639257 NUTM2BA6NNL0 878 aaPredicted RBP25.49■■□□□ 1.67
SPIN3-220ENST00000639257 NUTM2EB1AL46 878 aaPredicted RBP25.49■■□□□ 1.67
SPIN3-220ENST00000639257 NUTM2AQ8IVF1 878 aaPredicted RBP25.49■■□□□ 1.67
SPIN3-220ENST00000639257 CARD11Q9BXL7 1154 aa25.49■■□□□ 1.67
SPIN3-220ENST00000639257 POTEAQ6S8J7 498 aa25.48■■□□□ 1.67
SPIN3-220ENST00000639257 ARHGEF10O15013 1369 aa25.45■■□□□ 1.67
SPIN3-220ENST00000639257 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.66
SPIN3-220ENST00000639257 MARF1Q9Y4F3 1742 aaKnown RBP25.45■■□□□ 1.66
SPIN3-220ENST00000639257 ABCA3Q99758 1704 aa25.44■■□□□ 1.66
SPIN3-220ENST00000639257 EVC2Q86UK5 1308 aa25.43■■□□□ 1.66
SPIN3-220ENST00000639257 CABP2Q9NPB3 220 aa25.43■■□□□ 1.66
SPIN3-220ENST00000639257 ZNF772Q68DY9 489 aaPredicted RBP25.42■■□□□ 1.66
SPIN3-220ENST00000639257 NGDNQ8NEJ9 315 aaKnown RBP25.42■■□□□ 1.66
SPIN3-220ENST00000639257 PPIP5K1Q6PFW1 1433 aa25.42■■□□□ 1.66
SPIN3-220ENST00000639257 SRPK2P78362 688 aaKnown RBP25.41■■□□□ 1.66
SPIN3-220ENST00000639257 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
SPIN3-220ENST00000639257 ACEP12821 1306 aa25.4■■□□□ 1.66
SPIN3-220ENST00000639257 AFF2P51816 1311 aa25.4■■□□□ 1.66
SPIN3-220ENST00000639257 FNBP4Q8N3X1 1017 aaPredicted RBP25.39■■□□□ 1.66
SPIN3-220ENST00000639257 SOCS7O14512 581 aa25.38■■□□□ 1.65
SPIN3-220ENST00000639257 ADAMTS2O95450 1211 aa25.38■■□□□ 1.65
SPIN3-220ENST00000639257 C8orf37Q96NL8 207 aa25.37■■□□□ 1.65
SPIN3-220ENST00000639257 BRD4O60885 1362 aaPredicted RBP25.36■■□□□ 1.65
SPIN3-220ENST00000639257 TESK2Q96S53 571 aa25.36■■□□□ 1.65
SPIN3-220ENST00000639257 ATAD2Q6PL18 1390 aa25.35■■□□□ 1.65
SPIN3-220ENST00000639257 CCER1Q8TC90 406 aaPredicted RBP25.35■■□□□ 1.65
SPIN3-220ENST00000639257 SLIT2O94813 1529 aa25.34■■□□□ 1.65
SPIN3-220ENST00000639257 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms