RNA–Protein interactions for RNA: ENST00000639034.1

PAX6-249, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-249ENST00000639034 PHLPP1O60346 1717 aa17.5■□□□□ 0.39
PAX6-249ENST00000639034 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
PAX6-249ENST00000639034 PRAM1Q96QH2 718 aa17.49■□□□□ 0.39
PAX6-249ENST00000639034 POGKQ9P215 609 aa17.49■□□□□ 0.39
PAX6-249ENST00000639034 C1orf167Q5SNV9 1468 aa17.48■□□□□ 0.39
PAX6-249ENST00000639034 BRINP3Q76B58 766 aa17.48■□□□□ 0.39
PAX6-249ENST00000639034 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
PAX6-249ENST00000639034 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
PAX6-249ENST00000639034 ARHGEF28Q8N1W1 1705 aaKnown RBP17.46■□□□□ 0.39
PAX6-249ENST00000639034 COL16A1Q07092 1604 aaPredicted RBP17.45■□□□□ 0.38
PAX6-249ENST00000639034 NHSL1Q5SYE7 1610 aa17.45■□□□□ 0.38
PAX6-249ENST00000639034 FMN2Q9NZ56 1722 aa17.45■□□□□ 0.38
PAX6-249ENST00000639034 SAFB2Q14151 953 aaKnown RBP eCLIP17.45■□□□□ 0.38
PAX6-249ENST00000639034 ADGRB2O60241 1585 aa17.44■□□□□ 0.38
PAX6-249ENST00000639034 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
PAX6-249ENST00000639034 CLSPNQ9HAW4 1339 aa17.42■□□□□ 0.38
PAX6-249ENST00000639034 NBPF1Q3BBV0 1214 aa17.41■□□□□ 0.38
PAX6-249ENST00000639034 MED1Q15648 1581 aaPredicted RBP17.41■□□□□ 0.38
PAX6-249ENST00000639034 JCADQ9P266 1359 aa17.41■□□□□ 0.38
PAX6-249ENST00000639034 ORAI2Q96SN7 254 aa17.4■□□□□ 0.38
PAX6-249ENST00000639034 ROCK2O75116 1388 aaKnown RBP17.39■□□□□ 0.37
PAX6-249ENST00000639034 EIF3AQ14152 1382 aaKnown RBP17.39■□□□□ 0.37
PAX6-249ENST00000639034 DISP3Q9P2K9 1392 aa17.39■□□□□ 0.37
PAX6-249ENST00000639034 ESCO1Q5FWF5 840 aa17.39■□□□□ 0.37
PAX6-249ENST00000639034 KIF1AQ12756 1690 aa17.38■□□□□ 0.37
PAX6-249ENST00000639034 NUTM2FA1L443 756 aa17.38■□□□□ 0.37
PAX6-249ENST00000639034 MINK1Q8N4C8 1332 aaPredicted RBP17.38■□□□□ 0.37
PAX6-249ENST00000639034 SHPRHQ149N8 1683 aa17.37■□□□□ 0.37
PAX6-249ENST00000639034 ANKARQ7Z5J8 1434 aa17.37■□□□□ 0.37
PAX6-249ENST00000639034 HIRIP3Q9BW71 556 aaPredicted RBP17.36■□□□□ 0.37
PAX6-249ENST00000639034 NPHP3Q7Z494 1330 aa17.36■□□□□ 0.37
PAX6-249ENST00000639034 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
PAX6-249ENST00000639034 TULP4Q9NRJ4 1543 aa17.35■□□□□ 0.37
PAX6-249ENST00000639034 WASLO00401 505 aaPredicted RBP17.34■□□□□ 0.37
PAX6-249ENST00000639034 RGPD8O14715 1765 aaPredicted RBP17.34■□□□□ 0.37
PAX6-249ENST00000639034 NBPF8Q3BBV2 869 aa17.34■□□□□ 0.37
PAX6-249ENST00000639034 RALGAPBQ86X10 1494 aa17.34■□□□□ 0.37
PAX6-249ENST00000639034 DDX17Q92841 729 aaKnown RBP17.34■□□□□ 0.37
PAX6-249ENST00000639034 CENPJQ9HC77 1338 aaPredicted RBP17.34■□□□□ 0.37
PAX6-249ENST00000639034 USP32Q8NFA0 1604 aa17.33■□□□□ 0.37
PAX6-249ENST00000639034 GPRASP1Q5JY77 1395 aa17.33■□□□□ 0.37
PAX6-249ENST00000639034 SPATA31A6Q5VVP1 1343 aa17.33■□□□□ 0.37
PAX6-249ENST00000639034 QRICH2Q9H0J4 1663 aa17.33■□□□□ 0.36
PAX6-249ENST00000639034 SOS2Q07890 1332 aaPredicted RBP17.32■□□□□ 0.36
PAX6-249ENST00000639034 PHF23Q9BUL5 403 aaPredicted RBP17.32■□□□□ 0.36
PAX6-249ENST00000639034 ITSN1Q15811 1721 aa17.31■□□□□ 0.36
PAX6-249ENST00000639034 FOXO3O43524 673 aa17.31■□□□□ 0.36
PAX6-249ENST00000639034 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
PAX6-249ENST00000639034 PXDNQ92626 1479 aa17.31■□□□□ 0.36
PAX6-249ENST00000639034 TIMELESSQ9UNS1 1208 aa17.3■□□□□ 0.36
PAX6-249ENST00000639034 CARD11Q9BXL7 1154 aa17.29■□□□□ 0.36
PAX6-249ENST00000639034 ATP7BP35670 1465 aa17.28■□□□□ 0.36
PAX6-249ENST00000639034 PNPLA6Q8IY17 1366 aa17.28■□□□□ 0.36
PAX6-249ENST00000639034 CDK19Q9BWU1 502 aa17.27■□□□□ 0.35
PAX6-249ENST00000639034 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
PAX6-249ENST00000639034 XPCQ01831 940 aaPredicted RBP17.26■□□□□ 0.35
PAX6-249ENST00000639034 LRP6O75581 1613 aa17.25■□□□□ 0.35
PAX6-249ENST00000639034 PSME1Q06323 249 aa17.25■□□□□ 0.35
PAX6-249ENST00000639034 NUDT16Q96DE0 195 aaKnown RBP17.25■□□□□ 0.35
PAX6-249ENST00000639034 TOPAZ1Q8N9V7 1692 aa17.25■□□□□ 0.35
PAX6-249ENST00000639034 COL22A1Q8NFW1 1626 aaPredicted RBP17.24■□□□□ 0.35
PAX6-249ENST00000639034 SRPK2P78362 688 aaKnown RBP17.24■□□□□ 0.35
PAX6-249ENST00000639034 MEX3CQ5U5Q3 659 aaKnown RBP17.24■□□□□ 0.35
PAX6-249ENST00000639034 KRT28Q7Z3Y7 464 aa17.24■□□□□ 0.35
PAX6-249ENST00000639034 PMFBP1Q8TBY8 1022 aa17.24■□□□□ 0.35
PAX6-249ENST00000639034 NUTM2BA6NNL0 878 aaPredicted RBP17.23■□□□□ 0.35
PAX6-249ENST00000639034 NUTM2EB1AL46 878 aaPredicted RBP17.23■□□□□ 0.35
PAX6-249ENST00000639034 NUTM2AQ8IVF1 878 aaPredicted RBP17.23■□□□□ 0.35
PAX6-249ENST00000639034 EVC2Q86UK5 1308 aa17.22■□□□□ 0.35
PAX6-249ENST00000639034 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
PAX6-249ENST00000639034 NGDNQ8NEJ9 315 aaKnown RBP17.22■□□□□ 0.35
PAX6-249ENST00000639034 CCDC61Q9Y6R9 512 aa17.22■□□□□ 0.35
PAX6-249ENST00000639034 TNS3Q68CZ2 1445 aa17.22■□□□□ 0.35
PAX6-249ENST00000639034 SBNO1A3KN83 1393 aa17.21■□□□□ 0.35
PAX6-249ENST00000639034 SPATA31A3Q5VYP0 1347 aa17.21■□□□□ 0.35
PAX6-249ENST00000639034 ZEB1P37275 1124 aaPredicted RBP17.19■□□□□ 0.34
PAX6-249ENST00000639034 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
PAX6-249ENST00000639034 CABP2Q9NPB3 220 aa17.19■□□□□ 0.34
PAX6-249ENST00000639034 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
PAX6-249ENST00000639034 PPIP5K1Q6PFW1 1433 aa17.18■□□□□ 0.34
PAX6-249ENST00000639034 POLR3AO14802 1390 aaPredicted RBP17.17■□□□□ 0.34
PAX6-249ENST00000639034 PLEKHG3A1L390 1219 aa17.16■□□□□ 0.34
PAX6-249ENST00000639034 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
PAX6-249ENST00000639034 ACEP12821 1306 aa17.15■□□□□ 0.34
PAX6-249ENST00000639034 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
PAX6-249ENST00000639034 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
PAX6-249ENST00000639034 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
PAX6-249ENST00000639034 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
PAX6-249ENST00000639034 RGS17Q9UGC6 210 aaPredicted RBP17.15■□□□□ 0.34
PAX6-249ENST00000639034 ZNF772Q68DY9 489 aaPredicted RBP17.14■□□□□ 0.33
PAX6-249ENST00000639034 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
PAX6-249ENST00000639034 USP47Q96K76 1375 aa17.14■□□□□ 0.33
PAX6-249ENST00000639034 MARF1Q9Y4F3 1742 aaKnown RBP17.13■□□□□ 0.33
PAX6-249ENST00000639034 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
PAX6-249ENST00000639034 HAP1P54257 671 aaPredicted RBP17.13■□□□□ 0.33
PAX6-249ENST00000639034 ILDR2Q71H61 639 aa17.13■□□□□ 0.33
PAX6-249ENST00000639034 ABCA3Q99758 1704 aa17.12■□□□□ 0.33
PAX6-249ENST00000639034 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
PAX6-249ENST00000639034 CABP1Q9NZU7 370 aa17.11■□□□□ 0.33
PAX6-249ENST00000639034 BRD4O60885 1362 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms