RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 BICD2Q8TD16 824 aa20.83■□□□□ 0.93
HNRNPU-217ENST00000638952 PPP2R1AP30153 589 aa20.83■□□□□ 0.92
HNRNPU-217ENST00000638952 MRE11P49959 708 aa20.83■□□□□ 0.92
HNRNPU-217ENST00000638952 GGNBP2Q9H3C7 697 aa20.83■□□□□ 0.92
HNRNPU-217ENST00000638952 CDC45O75419 566 aa20.82■□□□□ 0.92
HNRNPU-217ENST00000638952 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
HNRNPU-217ENST00000638952 SYNJ1O43426 1573 aa20.82■□□□□ 0.92
HNRNPU-217ENST00000638952 VPS37CA5D8V6 355 aaPredicted RBP20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 PLCD4Q9BRC7 762 aa20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 FRAT2O75474 233 aaPredicted RBP20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 RBM10P98175 930 aaKnown RBP20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 CABP2Q9NPB3 220 aa20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 HSP90AB3PQ58FF7 597 aa20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 SASS6Q6UVJ0 657 aa20.81■□□□□ 0.92
HNRNPU-217ENST00000638952 SMC3Q9UQE7 1217 aa20.8■□□□□ 0.92
HNRNPU-217ENST00000638952 CFTRP13569 1480 aa20.8■□□□□ 0.92
HNRNPU-217ENST00000638952 NASPP49321 788 aaPredicted RBP20.8■□□□□ 0.92
HNRNPU-217ENST00000638952 NEXNQ0ZGT2 675 aa20.8■□□□□ 0.92
HNRNPU-217ENST00000638952 PRKCSHP14314 528 aaPredicted RBP20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 AKAP17AQ02040 695 aaKnown RBP20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 BRPF3Q9ULD4 1205 aa20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 PDZRN3Q9UPQ7 1066 aa20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 FBXW7Q969H0 707 aa20.79■□□□□ 0.92
HNRNPU-217ENST00000638952 TCP11L2Q8N4U5 519 aa20.78■□□□□ 0.92
HNRNPU-217ENST00000638952 TRAK2O60296 914 aa20.77■□□□□ 0.92
HNRNPU-217ENST00000638952 NBPF8Q3BBV2 869 aa20.77■□□□□ 0.92
HNRNPU-217ENST00000638952 MTHFSP49914 203 aa20.77■□□□□ 0.92
HNRNPU-217ENST00000638952 ERCC4Q92889 916 aaPredicted RBP20.77■□□□□ 0.91
HNRNPU-217ENST00000638952 LEKR1Q6ZMV7 388 aa20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 NAP1L1P55209 391 aaKnown RBP20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 WDR97A6NE52 1622 aa20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 RNF20Q5VTR2 975 aa20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 FOSBP53539 338 aa20.76■□□□□ 0.91
HNRNPU-217ENST00000638952 TTC5Q8N0Z6 440 aa20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.912e-8■■■□□ 15.2
HNRNPU-217ENST00000638952 HOOK1Q9UJC3 728 aaKnown RBP20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 SYNE3Q6ZMZ3 975 aa20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 TSPYL1Q9H0U9 437 aa20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 SMG6Q86US8 1419 aaKnown RBP20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 BCAR3O75815 825 aa20.75■□□□□ 0.91
HNRNPU-217ENST00000638952 CCDC47Q96A33 483 aaKnown RBP20.74■□□□□ 0.91
HNRNPU-217ENST00000638952 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
HNRNPU-217ENST00000638952 IL27Q8NEV9 243 aa20.74■□□□□ 0.91
HNRNPU-217ENST00000638952 TMX4Q9H1E5 349 aaPredicted RBP20.74■□□□□ 0.91
HNRNPU-217ENST00000638952 NBPF1Q3BBV0 1214 aa20.73■□□□□ 0.91
HNRNPU-217ENST00000638952 TRIM29Q14134 588 aa20.73■□□□□ 0.91
HNRNPU-217ENST00000638952 BACH2Q9BYV9 841 aa20.73■□□□□ 0.91
HNRNPU-217ENST00000638952 GTF2E1P29083 439 aaPredicted RBP20.72■□□□□ 0.91
HNRNPU-217ENST00000638952 CPLX1O14810 134 aa20.72■□□□□ 0.91
HNRNPU-217ENST00000638952 LRRFIP1Q32MZ4 808 aaKnown RBP20.72■□□□□ 0.91
HNRNPU-217ENST00000638952 EXOSC9Q06265 439 aaKnown RBP20.72■□□□□ 0.91
HNRNPU-217ENST00000638952 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.911e-7■■■■□ 22.9
HNRNPU-217ENST00000638952 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
HNRNPU-217ENST00000638952 C1orf115Q9H7X2 142 aa20.71■□□□□ 0.91
HNRNPU-217ENST00000638952 RNF214Q8ND24 703 aa20.71■□□□□ 0.91
HNRNPU-217ENST00000638952 CAGE1Q8TC20 777 aa20.71■□□□□ 0.91
HNRNPU-217ENST00000638952 ERC2O15083 957 aa20.7■□□□□ 0.9
HNRNPU-217ENST00000638952 CPLX2Q6PUV4 134 aaKnown RBP20.7■□□□□ 0.9
HNRNPU-217ENST00000638952 DDX58O95786 925 aaKnown RBP20.7■□□□□ 0.9
HNRNPU-217ENST00000638952 CAVIN1Q6NZI2 390 aaKnown RBP20.7■□□□□ 0.9
HNRNPU-217ENST00000638952 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
HNRNPU-217ENST00000638952 ARHGAP5Q13017 1502 aa20.69■□□□□ 0.9
HNRNPU-217ENST00000638952 EHBP1L1Q8N3D4 1523 aa20.69■□□□□ 0.9
HNRNPU-217ENST00000638952 HSP90AB4PQ58FF6 505 aa20.69■□□□□ 0.9
HNRNPU-217ENST00000638952 G3V3G9 751 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 DCAF8Q5TAQ9 597 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 NOB1Q9ULX3 412 aaKnown RBP20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 HMGN5P82970 282 aaKnown RBP20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 PDE3AQ14432 1141 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 TIAM1Q13009 1591 aa20.68■□□□□ 0.9
HNRNPU-217ENST00000638952 PDILTQ8N807 584 aa20.67■□□□□ 0.9
HNRNPU-217ENST00000638952 UBTFL1P0CB47 393 aaPredicted RBP20.67■□□□□ 0.9
HNRNPU-217ENST00000638952 TSR2Q969E8 191 aaKnown RBP20.67■□□□□ 0.9
HNRNPU-217ENST00000638952 HFM1A2PYH4 1435 aa20.66■□□□□ 0.9
HNRNPU-217ENST00000638952 SKIDA1Q1XH10 827 aa20.66■□□□□ 0.9
HNRNPU-217ENST00000638952 AXDND1Q5T1B0 1012 aaPredicted RBP20.66■□□□□ 0.9
HNRNPU-217ENST00000638952 CCDC27Q2M243 656 aa20.65■□□□□ 0.9
HNRNPU-217ENST00000638952 NINLQ9Y2I6 1382 aa20.65■□□□□ 0.9
HNRNPU-217ENST00000638952 PRPF40AO75400 957 aaKnown RBP20.64■□□□□ 0.9
HNRNPU-217ENST00000638952 NFXL1Q6ZNB6 911 aa20.64■□□□□ 0.9
HNRNPU-217ENST00000638952 PRKAR2BP31323 418 aa20.64■□□□□ 0.89
HNRNPU-217ENST00000638952 TRDNQ13061 729 aa20.64■□□□□ 0.89
HNRNPU-217ENST00000638952 NAT10Q9H0A0 1025 aaKnown RBP20.64■□□□□ 0.89
HNRNPU-217ENST00000638952 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.64■□□□□ 0.89
HNRNPU-217ENST00000638952 EFCAB5A4FU69 1503 aa20.63■□□□□ 0.89
HNRNPU-217ENST00000638952 TTLL5Q6EMB2 1281 aa20.63■□□□□ 0.89
HNRNPU-217ENST00000638952 CCDC173Q0VFZ6 552 aa20.63■□□□□ 0.89
HNRNPU-217ENST00000638952 MAPK8IP2Q13387 824 aaPredicted RBP20.63■□□□□ 0.89
HNRNPU-217ENST00000638952 AIMP1Q12904 312 aaKnown RBP20.62■□□□□ 0.89
HNRNPU-217ENST00000638952 CNTROBQ8N137 903 aa20.62■□□□□ 0.89
HNRNPU-217ENST00000638952 CT47A1Q5JQC4 288 aaPredicted RBP20.62■□□□□ 0.89
HNRNPU-217ENST00000638952 NEK4P51957 841 aa20.62■□□□□ 0.89
HNRNPU-217ENST00000638952 PSME1Q06323 249 aa20.62■□□□□ 0.89
HNRNPU-217ENST00000638952 GCC1Q96CN9 775 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms