RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 PRAM1Q96QH2 718 aa31.42■■■□□ 2.62
SCN1B-206ENST00000638536 DLC1Q96QB1 1528 aa31.4■■■□□ 2.62
SCN1B-206ENST00000638536 BRINP3Q76B58 766 aa31.38■■■□□ 2.61
SCN1B-206ENST00000638536 NBPF8Q3BBV2 869 aa31.36■■■□□ 2.61
SCN1B-206ENST00000638536 ARHGEF28Q8N1W1 1705 aaKnown RBP31.36■■■□□ 2.61
SCN1B-206ENST00000638536 CDC42BPGQ6DT37 1551 aa31.35■■■□□ 2.61
SCN1B-206ENST00000638536 TRPM1Q7Z4N2 1603 aa31.34■■■□□ 2.61
SCN1B-206ENST00000638536 C1orf167Q5SNV9 1468 aa31.34■■■□□ 2.61
SCN1B-206ENST00000638536 POGKQ9P215 609 aa31.34■■■□□ 2.61
SCN1B-206ENST00000638536 TONSLQ96HA7 1378 aa31.34■■■□□ 2.61
SCN1B-206ENST00000638536 PHLPP1O60346 1717 aa31.32■■■□□ 2.6
SCN1B-206ENST00000638536 NUTM2FA1L443 756 aa31.32■■■□□ 2.6
SCN1B-206ENST00000638536 ORAI2Q96SN7 254 aa31.31■■■□□ 2.6
SCN1B-206ENST00000638536 DDX17Q92841 729 aaKnown RBP31.29■■■□□ 2.6
SCN1B-206ENST00000638536 FMN2Q9NZ56 1722 aa31.28■■■□□ 2.6
SCN1B-206ENST00000638536 HIRIP3Q9BW71 556 aaPredicted RBP31.27■■■□□ 2.6
SCN1B-206ENST00000638536 RGPD8O14715 1765 aaPredicted RBP31.27■■■□□ 2.6
SCN1B-206ENST00000638536 MINK1Q8N4C8 1332 aaPredicted RBP31.26■■■□□ 2.59
SCN1B-206ENST00000638536 COL16A1Q07092 1604 aaPredicted RBP31.26■■■□□ 2.59
SCN1B-206ENST00000638536 AHDC1Q5TGY3 1603 aaPredicted RBP31.26■■■□□ 2.59
SCN1B-206ENST00000638536 NHSL1Q5SYE7 1610 aa31.24■■■□□ 2.59
SCN1B-206ENST00000638536 ADGRB2O60241 1585 aa31.21■■■□□ 2.59
SCN1B-206ENST00000638536 ROCK2O75116 1388 aaKnown RBP31.2■■■□□ 2.58
SCN1B-206ENST00000638536 ESCO1Q5FWF5 840 aa31.2■■■□□ 2.58
SCN1B-206ENST00000638536 CCER1Q8TC90 406 aaPredicted RBP31.2■■■□□ 2.58
SCN1B-206ENST00000638536 CLSPNQ9HAW4 1339 aa31.18■■■□□ 2.58
SCN1B-206ENST00000638536 USP32Q8NFA0 1604 aa31.17■■■□□ 2.58
SCN1B-206ENST00000638536 GPRASP1Q5JY77 1395 aa31.13■■■□□ 2.57
SCN1B-206ENST00000638536 WASLO00401 505 aaPredicted RBP31.13■■■□□ 2.57
SCN1B-206ENST00000638536 RALGAPBQ86X10 1494 aa31.12■■■□□ 2.57
SCN1B-206ENST00000638536 PRR36Q9H6K5 1346 aa31.11■■■□□ 2.57
SCN1B-206ENST00000638536 CENPJQ9HC77 1338 aaPredicted RBP31.11■■■□□ 2.57
SCN1B-206ENST00000638536 QRICH2Q9H0J4 1663 aa31.1■■■□□ 2.57
SCN1B-206ENST00000638536 MED1Q15648 1581 aaPredicted RBP31.1■■■□□ 2.57
SCN1B-206ENST00000638536 FOXO3O43524 673 aa31.1■■■□□ 2.57
SCN1B-206ENST00000638536 JCADQ9P266 1359 aa31.09■■■□□ 2.57
SCN1B-206ENST00000638536 XPCQ01831 940 aaPredicted RBP31.08■■■□□ 2.57
SCN1B-206ENST00000638536 CARD11Q9BXL7 1154 aa31.07■■■□□ 2.56
SCN1B-206ENST00000638536 SOS2Q07890 1332 aaPredicted RBP31.07■■■□□ 2.56
SCN1B-206ENST00000638536 CDK19Q9BWU1 502 aa31.06■■■□□ 2.56
SCN1B-206ENST00000638536 TULP4Q9NRJ4 1543 aa31.05■■■□□ 2.56
SCN1B-206ENST00000638536 ANKARQ7Z5J8 1434 aa31.05■■■□□ 2.56
SCN1B-206ENST00000638536 SHPRHQ149N8 1683 aa31.04■■■□□ 2.56
SCN1B-206ENST00000638536 PHF8Q9UPP1 1060 aa31.04■■■□□ 2.56
SCN1B-206ENST00000638536 DISP3Q9P2K9 1392 aa31.04■■■□□ 2.56
SCN1B-206ENST00000638536 KIF1AQ12756 1690 aa31.03■■■□□ 2.56
SCN1B-206ENST00000638536 PMFBP1Q8TBY8 1022 aa31.03■■■□□ 2.56
SCN1B-206ENST00000638536 PXDNQ92626 1479 aa31.03■■■□□ 2.56
SCN1B-206ENST00000638536 LRRC59Q96AG4 307 aaKnown RBP31.02■■■□□ 2.56
SCN1B-206ENST00000638536 NPHP3Q7Z494 1330 aa31.02■■■□□ 2.56
SCN1B-206ENST00000638536 ATP7BP35670 1465 aa31.01■■■□□ 2.55
SCN1B-206ENST00000638536 TIMELESSQ9UNS1 1208 aa31.01■■■□□ 2.55
SCN1B-206ENST00000638536 NUDT16Q96DE0 195 aaKnown RBP30.99■■■□□ 2.55
SCN1B-206ENST00000638536 EIF3AQ14152 1382 aaKnown RBP30.97■■■□□ 2.55
SCN1B-206ENST00000638536 PNPLA6Q8IY17 1366 aa30.97■■■□□ 2.55
SCN1B-206ENST00000638536 LRP6O75581 1613 aa30.97■■■□□ 2.55
SCN1B-206ENST00000638536 CABP2Q9NPB3 220 aa30.95■■■□□ 2.55
SCN1B-206ENST00000638536 KRT28Q7Z3Y7 464 aa30.95■■■□□ 2.54
SCN1B-206ENST00000638536 ITSN1Q15811 1721 aa30.93■■■□□ 2.54
SCN1B-206ENST00000638536 TOPAZ1Q8N9V7 1692 aa30.93■■■□□ 2.54
SCN1B-206ENST00000638536 SPATA31A6Q5VVP1 1343 aa30.93■■■□□ 2.54
SCN1B-206ENST00000638536 SRPK2P78362 688 aaKnown RBP30.91■■■□□ 2.54
SCN1B-206ENST00000638536 NUTM2BA6NNL0 878 aaPredicted RBP30.91■■■□□ 2.54
SCN1B-206ENST00000638536 NUTM2EB1AL46 878 aaPredicted RBP30.91■■■□□ 2.54
SCN1B-206ENST00000638536 NUTM2AQ8IVF1 878 aaPredicted RBP30.91■■■□□ 2.54
SCN1B-206ENST00000638536 PSME1Q06323 249 aa30.88■■■□□ 2.53
SCN1B-206ENST00000638536 CCDC61Q9Y6R9 512 aa30.88■■■□□ 2.53
SCN1B-206ENST00000638536 RGS17Q9UGC6 210 aaPredicted RBP30.87■■■□□ 2.53
SCN1B-206ENST00000638536 SPATA31A3Q5VYP0 1347 aa30.86■■■□□ 2.53
SCN1B-206ENST00000638536 EVC2Q86UK5 1308 aa30.86■■■□□ 2.53
SCN1B-206ENST00000638536 TRPM3Q9HCF6 1732 aaPredicted RBP30.85■■■□□ 2.53
SCN1B-206ENST00000638536 ST20-MTHFSA0A0A6YYL1 179 aa30.85■■■□□ 2.53
SCN1B-206ENST00000638536 NGDNQ8NEJ9 315 aaKnown RBP30.85■■■□□ 2.53
SCN1B-206ENST00000638536 COL22A1Q8NFW1 1626 aaPredicted RBP30.85■■■□□ 2.53
SCN1B-206ENST00000638536 PHF23Q9BUL5 403 aaPredicted RBP30.84■■■□□ 2.53
SCN1B-206ENST00000638536 SBNO2Q9Y2G9 1366 aa30.83■■■□□ 2.53
SCN1B-206ENST00000638536 PLEKHG3A1L390 1219 aa30.82■■■□□ 2.52
SCN1B-206ENST00000638536 ACEP12821 1306 aa30.82■■■□□ 2.52
SCN1B-206ENST00000638536 PPIP5K1Q6PFW1 1433 aa30.82■■■□□ 2.52
SCN1B-206ENST00000638536 TESK2Q96S53 571 aa30.81■■■□□ 2.52
SCN1B-206ENST00000638536 TNS3Q68CZ2 1445 aa30.8■■■□□ 2.52
SCN1B-206ENST00000638536 ILDR2Q71H61 639 aa30.8■■■□□ 2.52
SCN1B-206ENST00000638536 SBNO1A3KN83 1393 aa30.8■■■□□ 2.52
SCN1B-206ENST00000638536 USP47Q96K76 1375 aa30.8■■■□□ 2.52
SCN1B-206ENST00000638536 POLR3AO14802 1390 aaPredicted RBP30.79■■■□□ 2.52
SCN1B-206ENST00000638536 CABP1Q9NZU7 370 aa30.79■■■□□ 2.52
SCN1B-206ENST00000638536 MEX3CQ5U5Q3 659 aaKnown RBP30.77■■■□□ 2.52
SCN1B-206ENST00000638536 ADAMTS2O95450 1211 aa30.76■■■□□ 2.52
SCN1B-206ENST00000638536 LMOD2Q6P5Q4 547 aa30.76■■■□□ 2.52
SCN1B-206ENST00000638536 ALS2Q96Q42 1657 aa30.76■■■□□ 2.52
SCN1B-206ENST00000638536 PLEKHG5O94827 1062 aa30.76■■■□□ 2.51
SCN1B-206ENST00000638536 CABLES1Q8TDN4 633 aa30.74■■■□□ 2.51
SCN1B-206ENST00000638536 PAK3O75914 559 aaPredicted RBP30.73■■■□□ 2.51
SCN1B-206ENST00000638536 C8orf37Q96NL8 207 aa30.7■■■□□ 2.51
SCN1B-206ENST00000638536 POTEAQ6S8J7 498 aa30.69■■■□□ 2.5
SCN1B-206ENST00000638536 ABCA3Q99758 1704 aa30.69■■■□□ 2.5
SCN1B-206ENST00000638536 ARHGEF10O15013 1369 aa30.68■■■□□ 2.5
SCN1B-206ENST00000638536 MARF1Q9Y4F3 1742 aaKnown RBP30.68■■■□□ 2.5
SCN1B-206ENST00000638536 ATAD2Q6PL18 1390 aa30.67■■■□□ 2.5
SCN1B-206ENST00000638536 AKAP12Q02952 1782 aa30.65■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms