RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 ARHGEF28Q8N1W1 1705 aaKnown RBP18.08■□□□□ 0.48
CLN6-225ENST00000638144 BRINP3Q76B58 766 aa18.07■□□□□ 0.48
CLN6-225ENST00000638144 STAC3Q96MF2 364 aa18.07■□□□□ 0.48
CLN6-225ENST00000638144 DLC1Q96QB1 1528 aa18.07■□□□□ 0.48
CLN6-225ENST00000638144 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
CLN6-225ENST00000638144 NBPF1Q3BBV0 1214 aa18.06■□□□□ 0.48
CLN6-225ENST00000638144 C1orf167Q5SNV9 1468 aa18.06■□□□□ 0.48
CLN6-225ENST00000638144 COL16A1Q07092 1604 aaPredicted RBP18.05■□□□□ 0.48
CLN6-225ENST00000638144 FMN2Q9NZ56 1722 aa18.05■□□□□ 0.48
CLN6-225ENST00000638144 TRPM1Q7Z4N2 1603 aa18.05■□□□□ 0.48
CLN6-225ENST00000638144 DDX17Q92841 729 aaKnown RBP18.04■□□□□ 0.48
CLN6-225ENST00000638144 POGKQ9P215 609 aa18.04■□□□□ 0.48
CLN6-225ENST00000638144 AHDC1Q5TGY3 1603 aaPredicted RBP18.04■□□□□ 0.48
CLN6-225ENST00000638144 NHSL1Q5SYE7 1610 aa18.03■□□□□ 0.48
CLN6-225ENST00000638144 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
CLN6-225ENST00000638144 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.48
CLN6-225ENST00000638144 MED1Q15648 1581 aaPredicted RBP18.02■□□□□ 0.48
CLN6-225ENST00000638144 ORAI2Q96SN7 254 aa18.02■□□□□ 0.48
CLN6-225ENST00000638144 HIRIP3Q9BW71 556 aaPredicted RBP18.02■□□□□ 0.48
CLN6-225ENST00000638144 MINK1Q8N4C8 1332 aaPredicted RBP18.01■□□□□ 0.47
CLN6-225ENST00000638144 NBPF8Q3BBV2 869 aa18■□□□□ 0.47
CLN6-225ENST00000638144 SIRT1Q96EB6 747 aa18■□□□□ 0.47
CLN6-225ENST00000638144 ADGRB2O60241 1585 aa17.99■□□□□ 0.47
CLN6-225ENST00000638144 DISP3Q9P2K9 1392 aa17.97■□□□□ 0.47
CLN6-225ENST00000638144 ESCO1Q5FWF5 840 aa17.97■□□□□ 0.47
CLN6-225ENST00000638144 USP32Q8NFA0 1604 aa17.97■□□□□ 0.47
CLN6-225ENST00000638144 ROCK2O75116 1388 aaKnown RBP17.95■□□□□ 0.46
CLN6-225ENST00000638144 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
CLN6-225ENST00000638144 XPCQ01831 940 aaPredicted RBP17.94■□□□□ 0.46
CLN6-225ENST00000638144 SHPRHQ149N8 1683 aa17.93■□□□□ 0.46
CLN6-225ENST00000638144 JCADQ9P266 1359 aa17.92■□□□□ 0.46
CLN6-225ENST00000638144 KIF1AQ12756 1690 aa17.91■□□□□ 0.46
CLN6-225ENST00000638144 CCER1Q8TC90 406 aaPredicted RBP17.91■□□□□ 0.46
CLN6-225ENST00000638144 PRR36Q9H6K5 1346 aa17.91■□□□□ 0.46
CLN6-225ENST00000638144 RALGAPBQ86X10 1494 aa17.9■□□□□ 0.46
CLN6-225ENST00000638144 TULP4Q9NRJ4 1543 aa17.9■□□□□ 0.46
CLN6-225ENST00000638144 FOXO3O43524 673 aa17.9■□□□□ 0.46
CLN6-225ENST00000638144 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
CLN6-225ENST00000638144 LRP6O75581 1613 aa17.89■□□□□ 0.45
CLN6-225ENST00000638144 CENPJQ9HC77 1338 aaPredicted RBP17.89■□□□□ 0.45
CLN6-225ENST00000638144 PXDNQ92626 1479 aa17.88■□□□□ 0.45
CLN6-225ENST00000638144 ANKARQ7Z5J8 1434 aa17.88■□□□□ 0.45
CLN6-225ENST00000638144 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
CLN6-225ENST00000638144 PHF8Q9UPP1 1060 aa17.87■□□□□ 0.45
CLN6-225ENST00000638144 SOS2Q07890 1332 aaPredicted RBP17.87■□□□□ 0.45
CLN6-225ENST00000638144 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
CLN6-225ENST00000638144 ATP7BP35670 1465 aa17.87■□□□□ 0.45
CLN6-225ENST00000638144 NUTM2BA6NNL0 878 aaPredicted RBP17.86■□□□□ 0.45
CLN6-225ENST00000638144 NUTM2EB1AL46 878 aaPredicted RBP17.86■□□□□ 0.45
CLN6-225ENST00000638144 NUTM2AQ8IVF1 878 aaPredicted RBP17.86■□□□□ 0.45
CLN6-225ENST00000638144 NPHP3Q7Z494 1330 aa17.86■□□□□ 0.45
CLN6-225ENST00000638144 PNPLA6Q8IY17 1366 aa17.86■□□□□ 0.45
CLN6-225ENST00000638144 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
CLN6-225ENST00000638144 PHF23Q9BUL5 403 aaPredicted RBP17.85■□□□□ 0.45
CLN6-225ENST00000638144 CDK19Q9BWU1 502 aa17.85■□□□□ 0.45
CLN6-225ENST00000638144 CARD11Q9BXL7 1154 aa17.85■□□□□ 0.45
CLN6-225ENST00000638144 TOPAZ1Q8N9V7 1692 aa17.84■□□□□ 0.45
CLN6-225ENST00000638144 EIF3AQ14152 1382 aaKnown RBP17.84■□□□□ 0.45
CLN6-225ENST00000638144 CLSPNQ9HAW4 1339 aa17.84■□□□□ 0.45
CLN6-225ENST00000638144 LRRC59Q96AG4 307 aaKnown RBP17.84■□□□□ 0.45
CLN6-225ENST00000638144 NUDT16Q96DE0 195 aaKnown RBP17.82■□□□□ 0.44
CLN6-225ENST00000638144 SPATA31A6Q5VVP1 1343 aa17.81■□□□□ 0.44
CLN6-225ENST00000638144 PLEKHG5O94827 1062 aa17.81■□□□□ 0.44
CLN6-225ENST00000638144 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
CLN6-225ENST00000638144 SRPK2P78362 688 aaKnown RBP17.8■□□□□ 0.44
CLN6-225ENST00000638144 ILDR2Q71H61 639 aa17.8■□□□□ 0.44
CLN6-225ENST00000638144 KRT28Q7Z3Y7 464 aa17.8■□□□□ 0.44
CLN6-225ENST00000638144 COL22A1Q8NFW1 1626 aaPredicted RBP17.8■□□□□ 0.44
CLN6-225ENST00000638144 TRPM3Q9HCF6 1732 aaPredicted RBP17.79■□□□□ 0.44
CLN6-225ENST00000638144 MEX3CQ5U5Q3 659 aaKnown RBP17.79■□□□□ 0.44
CLN6-225ENST00000638144 RGS17Q9UGC6 210 aaPredicted RBP17.78■□□□□ 0.44
CLN6-225ENST00000638144 PSME1Q06323 249 aa17.77■□□□□ 0.44
CLN6-225ENST00000638144 NGDNQ8NEJ9 315 aaKnown RBP17.77■□□□□ 0.44
CLN6-225ENST00000638144 TNS3Q68CZ2 1445 aa17.77■□□□□ 0.44
CLN6-225ENST00000638144 LMOD2Q6P5Q4 547 aa17.76■□□□□ 0.43
CLN6-225ENST00000638144 SPATA31A3Q5VYP0 1347 aa17.75■□□□□ 0.43
CLN6-225ENST00000638144 PPIP5K1Q6PFW1 1433 aa17.75■□□□□ 0.43
CLN6-225ENST00000638144 ADAMTS2O95450 1211 aa17.75■□□□□ 0.43
CLN6-225ENST00000638144 EVC2Q86UK5 1308 aa17.74■□□□□ 0.43
CLN6-225ENST00000638144 ABCA3Q99758 1704 aa17.74■□□□□ 0.43
CLN6-225ENST00000638144 ALS2Q96Q42 1657 aa17.74■□□□□ 0.43
CLN6-225ENST00000638144 CCDC61Q9Y6R9 512 aa17.73■□□□□ 0.43
CLN6-225ENST00000638144 ACEP12821 1306 aa17.72■□□□□ 0.43
CLN6-225ENST00000638144 SBNO1A3KN83 1393 aa17.72■□□□□ 0.43
CLN6-225ENST00000638144 USP47Q96K76 1375 aa17.72■□□□□ 0.43
CLN6-225ENST00000638144 CABLES1Q8TDN4 633 aa17.72■□□□□ 0.43
CLN6-225ENST00000638144 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
CLN6-225ENST00000638144 ST20-MTHFSA0A0A6YYL1 179 aa17.71■□□□□ 0.43
CLN6-225ENST00000638144 PAK3O75914 559 aaPredicted RBP17.71■□□□□ 0.43
CLN6-225ENST00000638144 TIMELESSQ9UNS1 1208 aa17.71■□□□□ 0.43
CLN6-225ENST00000638144 MARF1Q9Y4F3 1742 aaKnown RBP17.71■□□□□ 0.43
CLN6-225ENST00000638144 POLR3AO14802 1390 aaPredicted RBP17.7■□□□□ 0.42
CLN6-225ENST00000638144 SBNO2Q9Y2G9 1366 aa17.7■□□□□ 0.42
CLN6-225ENST00000638144 POTEAQ6S8J7 498 aa17.7■□□□□ 0.42
CLN6-225ENST00000638144 PLEKHG3A1L390 1219 aa17.69■□□□□ 0.42
CLN6-225ENST00000638144 CABP1Q9NZU7 370 aa17.69■□□□□ 0.42
CLN6-225ENST00000638144 AFF2P51816 1311 aa17.69■□□□□ 0.42
CLN6-225ENST00000638144 NUTM2GQ5VZR2 741 aa17.68■□□□□ 0.42
CLN6-225ENST00000638144 ARHGEF10O15013 1369 aa17.67■□□□□ 0.42
CLN6-225ENST00000638144 CRYBG1Q9Y4K1 1723 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms