RNA–Protein interactions for RNA: ENST00000638029.1

CACNA1A-258, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-258ENST00000638029 DDX11L8A8MPP1 907 aa19.7■□□□□ 0.74
CACNA1A-258ENST00000638029 GSE1Q14687 1217 aa19.69■□□□□ 0.74
CACNA1A-258ENST00000638029 MNS1Q8NEH6 495 aa19.69■□□□□ 0.74
CACNA1A-258ENST00000638029 TSPYL1Q9H0U9 437 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 PDCL3Q9H2J4 239 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 CENPHQ9H3R5 247 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 SASS6Q6UVJ0 657 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 ABCC8Q09428 1581 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 WDR78Q5VTH9 848 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 RIC3Q7Z5B4 369 aa19.68■□□□□ 0.74
CACNA1A-258ENST00000638029 HMGN5P82970 282 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 TSHZ2Q9NRE2 1034 aa19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 SAFBQ15424 915 aaKnown RBP eCLIP19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 ATP6V1DQ9Y5K8 247 aa19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 COG3Q96JB2 828 aa19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 TTLL12Q14166 644 aaPredicted RBP19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 ZRSR2Q15696 482 aaKnown RBP19.67■□□□□ 0.74
CACNA1A-258ENST00000638029 TAX1BP1Q86VP1 789 aa19.66■□□□□ 0.74
CACNA1A-258ENST00000638029 RBM42Q9BTD8 480 aaKnown RBP19.66■□□□□ 0.74
CACNA1A-258ENST00000638029 BRMS1Q9HCU9 246 aa19.66■□□□□ 0.74
CACNA1A-258ENST00000638029 ZSCAN29Q8IWY8 852 aaPredicted RBP19.65■□□□□ 0.74
CACNA1A-258ENST00000638029 HSP90AB4PQ58FF6 505 aa19.65■□□□□ 0.74
CACNA1A-258ENST00000638029 DCTN1Q14203 1278 aa19.65■□□□□ 0.74
CACNA1A-258ENST00000638029 CYB5RLQ6IPT4 315 aa19.65■□□□□ 0.74
CACNA1A-258ENST00000638029 G3BP1Q13283 466 aaKnown RBP eCLIP19.64■□□□□ 0.73
CACNA1A-258ENST00000638029 HSP90B2PQ58FF3 399 aa19.64■□□□□ 0.73
CACNA1A-258ENST00000638029 FMN1Q68DA7 1419 aa19.64■□□□□ 0.73
CACNA1A-258ENST00000638029 PUS7Q96PZ0 661 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-258ENST00000638029 RAB3GAP2Q9H2M9 1393 aa19.63■□□□□ 0.73
CACNA1A-258ENST00000638029 AXDND1Q5T1B0 1012 aaPredicted RBP19.63■□□□□ 0.73
CACNA1A-258ENST00000638029 SEPT11Q9NVA2 429 aaKnown RBP19.63■□□□□ 0.73
CACNA1A-258ENST00000638029 PHLDB1Q86UU1 1377 aa19.63■□□□□ 0.73
CACNA1A-258ENST00000638029 RALYLQ86SE5 291 aaKnown RBP19.62■□□□□ 0.73
CACNA1A-258ENST00000638029 ECM2O94769 699 aaPredicted RBP19.62■□□□□ 0.73
CACNA1A-258ENST00000638029 RUFY2Q8WXA3 655 aa19.61■□□□□ 0.73
CACNA1A-258ENST00000638029 CLASRPQ8N2M8 674 aaKnown RBP19.61■□□□□ 0.73
CACNA1A-258ENST00000638029 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
CACNA1A-258ENST00000638029 DDX58O95786 925 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 OLFM4Q6UX06 510 aa19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 CWC15Q9P013 229 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 DNAJC2Q99543 621 aaKnown RBP19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 SOGA1O94964 1423 aa19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 FAM193AP78312 1265 aa19.6■□□□□ 0.73
CACNA1A-258ENST00000638029 ZKSCAN1P17029 563 aaPredicted RBP19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 SSR1P43307 286 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 NLRP13Q86W25 1043 aa19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 KIF15Q9NS87 1388 aa19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 CEBPZQ03701 1054 aaKnown RBP19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 KIF6Q6ZMV9 814 aa19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 FMNL2Q96PY5 1086 aa19.59■□□□□ 0.73
CACNA1A-258ENST00000638029 PIBF1Q8WXW3 757 aa19.58■□□□□ 0.73
CACNA1A-258ENST00000638029 MYO6Q9UM54 1294 aa19.58■□□□□ 0.72
CACNA1A-258ENST00000638029 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.72
CACNA1A-258ENST00000638029 UACAQ9BZF9 1416 aa19.57■□□□□ 0.72
CACNA1A-258ENST00000638029 SCLT1Q96NL6 688 aa19.57■□□□□ 0.72
CACNA1A-258ENST00000638029 NLRP2Q9NX02 1062 aa19.57■□□□□ 0.72
CACNA1A-258ENST00000638029 SMC2O95347 1197 aa19.57■□□□□ 0.72
CACNA1A-258ENST00000638029 FAM161AQ3B820 660 aa19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 BCCIPQ9P287 314 aaKnown RBP eCLIP19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 PDS5BQ9NTI5 1447 aa19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 NF2P35240 595 aa19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 ACBD3Q9H3P7 528 aa19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 RBM10P98175 930 aaKnown RBP19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 FKBP5Q13451 457 aaPredicted RBP19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 FAM43AQ8N2R8 423 aa19.56■□□□□ 0.72
CACNA1A-258ENST00000638029 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
CACNA1A-258ENST00000638029 DRC1Q96MC2 740 aa19.55■□□□□ 0.72
CACNA1A-258ENST00000638029 XBP1P17861 261 aa19.55■□□□□ 0.72
CACNA1A-258ENST00000638029 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
CACNA1A-258ENST00000638029 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
CACNA1A-258ENST00000638029 FAM177A1Q8N128 213 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-258ENST00000638029 VPS8Q8N3P4 1428 aa19.54■□□□□ 0.72
CACNA1A-258ENST00000638029 MAGEC2Q9UBF1 373 aaPredicted RBP19.54■□□□□ 0.72
CACNA1A-258ENST00000638029 WASHC2AQ641Q2 1341 aa19.54■□□□□ 0.72
CACNA1A-258ENST00000638029 ARGLU1Q9NWB6 273 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 PDE3BQ13370 1112 aa19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 SMC3Q9UQE7 1217 aa19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 CCDC144AA2RUR9 1427 aa19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 CENPQQ7L2Z9 268 aaPredicted RBP19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 TANGO6Q9C0B7 1094 aa19.53■□□□□ 0.72
CACNA1A-258ENST00000638029 PANK3Q9H999 370 aa19.52■□□□□ 0.72
CACNA1A-258ENST00000638029 CT47B1P0C2W7 299 aaPredicted RBP19.52■□□□□ 0.72
CACNA1A-258ENST00000638029 KANK4Q5T7N3 995 aaPredicted RBP19.52■□□□□ 0.71
CACNA1A-258ENST00000638029 CNNM1Q9NRU3 951 aa19.52■□□□□ 0.71
CACNA1A-258ENST00000638029 SMARCA2P51531 1590 aa19.52■□□□□ 0.71
CACNA1A-258ENST00000638029 SKOR2Q2VWA4 1001 aaPredicted RBP19.52■□□□□ 0.71
CACNA1A-258ENST00000638029 RNF20Q5VTR2 975 aa19.51■□□□□ 0.71
CACNA1A-258ENST00000638029 BICDL1Q6ZP65 573 aa19.51■□□□□ 0.71
CACNA1A-258ENST00000638029 ZKSCAN2Q63HK3 967 aa19.51■□□□□ 0.71
CACNA1A-258ENST00000638029 REC8O95072 547 aa19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 HMOX1P09601 288 aa19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 GBP2P32456 591 aaPredicted RBP19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 TAF3Q5VWG9 929 aa19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 SPC24Q8NBT2 197 aa19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 DDX54Q8TDD1 881 aaKnown RBP19.5■□□□□ 0.71
CACNA1A-258ENST00000638029 GOLGA6L10A0A0M3HER8 536 aa19.49■□□□□ 0.71
CACNA1A-258ENST00000638029 GOLGA6L10A6NI86 522 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms