RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 SLC16A10Q8TF71 515 aa5.49□□□□□ -1.53
VIM-210ENST00000637053 NUTM2FA1L443 756 aa5.48□□□□□ -1.53
VIM-210ENST00000637053 ZBTB24O43167 697 aaPredicted RBP5.48□□□□□ -1.53
VIM-210ENST00000637053 RNF19BQ6ZMZ0 732 aa5.48□□□□□ -1.53
VIM-210ENST00000637053 METTL3Q86U44 580 aaKnown RBP5.48□□□□□ -1.53
VIM-210ENST00000637053 SPRYD3Q8NCJ5 442 aa5.48□□□□□ -1.53
VIM-210ENST00000637053 ATP6V1AP38606 617 aa5.47□□□□□ -1.53
VIM-210ENST00000637053 SALL2Q9Y467 1007 aaPredicted RBP5.47□□□□□ -1.53
VIM-210ENST00000637053 H3BM21 787 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 OATP04181 439 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 BMP1P13497 986 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 FECHP22830 423 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 GSK3AP49840 483 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 SKOR1P84550 965 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 MSS51Q4VC12 460 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 TRIM46Q7Z4K8 759 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 IRF7Q92985 503 aa5.46□□□□□ -1.54
VIM-210ENST00000637053 RSPH4AQ5TD94 716 aa5.45□□□□□ -1.54
VIM-210ENST00000637053 RDH13Q8NBN7 331 aa5.45□□□□□ -1.54
VIM-210ENST00000637053 NLRP7Q8WX94 980 aa5.45□□□□□ -1.54
VIM-210ENST00000637053 ARXQ96QS3 562 aa5.45□□□□□ -1.54
VIM-210ENST00000637053 FCHSD2O94868 740 aa5.44□□□□□ -1.54
VIM-210ENST00000637053 GCGRP47871 477 aa5.44□□□□□ -1.54
VIM-210ENST00000637053 MMP16P51512 607 aa5.44□□□□□ -1.54
VIM-210ENST00000637053 RC3H1Q5TC82 1133 aaKnown RBP5.44□□□□□ -1.54
VIM-210ENST00000637053 NPAS3Q8IXF0 933 aa5.44□□□□□ -1.54
VIM-210ENST00000637053 DDX11L8A8MPP1 907 aa5.43□□□□□ -1.54
VIM-210ENST00000637053 PRKCSHP14314 528 aaPredicted RBP5.43□□□□□ -1.54
VIM-210ENST00000637053 ARHGEF1Q92888 912 aaKnown RBP5.43□□□□□ -1.54
VIM-210ENST00000637053 KCTD17Q8N5Z5 321 aa5.42□□□□□ -1.54
VIM-210ENST00000637053 REPIN1Q9BWE0 567 aaKnown RBP5.42□□□□□ -1.54
VIM-210ENST00000637053 ALDH1A1P00352 501 aa5.41□□□□□ -1.54
VIM-210ENST00000637053 KCNV2Q8TDN2 545 aa5.41□□□□□ -1.54
VIM-210ENST00000637053 SIAH2O43255 324 aa5.4□□□□□ -1.54
VIM-210ENST00000637053 DXOO77932 396 aaKnown RBP5.4□□□□□ -1.54
VIM-210ENST00000637053 PHOX2BQ99453 314 aa5.4□□□□□ -1.54
VIM-210ENST00000637053 KCNMA1Q12791 1236 aa5.39□□□□□ -1.55
VIM-210ENST00000637053 CAPN5O15484 640 aaPredicted RBP5.38□□□□□ -1.55
VIM-210ENST00000637053 WNT7BP56706 349 aa5.38□□□□□ -1.55
VIM-210ENST00000637053 PAXIP1Q6ZW49 1069 aaPredicted RBP5.38□□□□□ -1.55
VIM-210ENST00000637053 ZFP42Q96MM3 310 aa5.38□□□□□ -1.55
VIM-210ENST00000637053 CFAP44Q96MT7 982 aa5.38□□□□□ -1.55
VIM-210ENST00000637053 HIC1Q14526 733 aa5.37□□□□□ -1.55
VIM-210ENST00000637053 CCDC24Q8N4L8 307 aa5.37□□□□□ -1.55
VIM-210ENST00000637053 SOBPA7XYQ1 873 aa5.36□□□□□ -1.55
VIM-210ENST00000637053 VSIG8P0DPA2 414 aa5.36□□□□□ -1.55
VIM-210ENST00000637053 ERICH6Q7L0X2 663 aa5.36□□□□□ -1.55
VIM-210ENST00000637053 USB1Q9BQ65 265 aaKnown RBP5.36□□□□□ -1.55
VIM-210ENST00000637053 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.36□□□□□ -1.55
VIM-210ENST00000637053 SEMA3EO15041 775 aa5.35□□□□□ -1.55
VIM-210ENST00000637053 Q3C1V9 767 aa5.35□□□□□ -1.55
VIM-210ENST00000637053 PTCRAQ6ISU1 281 aaPredicted RBP5.35□□□□□ -1.55
VIM-210ENST00000637053 HLA-CQ95604 372 aa5.35□□□□□ -1.55
VIM-210ENST00000637053 GPR37O15354 613 aa5.34□□□□□ -1.55
VIM-210ENST00000637053 SULF1Q8IWU6 871 aa5.34□□□□□ -1.55
VIM-210ENST00000637053 TIMELESSQ9UNS1 1208 aa5.34□□□□□ -1.55
VIM-210ENST00000637053 RBM26Q5T8P6 1007 aaKnown RBP5.33□□□□□ -1.56
VIM-210ENST00000637053 TMEM151AQ8N4L1 468 aa5.33□□□□□ -1.56
VIM-210ENST00000637053 GNPATO15228 680 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 GDF11O95390 407 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 RASSF7Q02833 373 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 GRIPAP1Q4V328 841 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 EHBP1Q8NDI1 1231 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 WASF2Q9Y6W5 498 aa5.32□□□□□ -1.56
VIM-210ENST00000637053 CD46P15529 392 aa5.3□□□□□ -1.56
VIM-210ENST00000637053 RANGAP1P46060 587 aaPredicted RBP5.3□□□□□ -1.56
VIM-210ENST00000637053 SH3BP2P78314 561 aa5.3□□□□□ -1.56
VIM-210ENST00000637053 MRPL14Q6P1L8 145 aaKnown RBP5.3□□□□□ -1.56
VIM-210ENST00000637053 SYMPKQ92797 1274 aaKnown RBP5.3□□□□□ -1.56
VIM-210ENST00000637053 PURBQ96QR8 312 aaKnown RBP5.3□□□□□ -1.56
VIM-210ENST00000637053 KDM4AO75164 1064 aa5.29□□□□□ -1.56
VIM-210ENST00000637053 JUNDP17535 347 aa5.29□□□□□ -1.56
VIM-210ENST00000637053 KRT76Q01546 638 aa5.29□□□□□ -1.56
VIM-210ENST00000637053 TLL2Q9Y6L7 1015 aa5.29□□□□□ -1.56
VIM-210ENST00000637053 GUCA2AQ02747 115 aa5.28□□□□□ -1.56
VIM-210ENST00000637053 HOMEZQ8IX15 550 aa5.28□□□□□ -1.56
VIM-210ENST00000637053 KLF16Q9BXK1 252 aaPredicted RBP5.28□□□□□ -1.56
VIM-210ENST00000637053 TSHZ2Q9NRE2 1034 aa5.28□□□□□ -1.56
VIM-210ENST00000637053 ADAMTS8Q9UP79 889 aa5.28□□□□□ -1.56
VIM-210ENST00000637053 PPFIA3O75145 1194 aa5.27□□□□□ -1.57
VIM-210ENST00000637053 TIMP2P16035 220 aa5.27□□□□□ -1.57
VIM-210ENST00000637053 XP32Q5T750 250 aa5.27□□□□□ -1.57
VIM-210ENST00000637053 BCANQ96GW7 911 aa5.27□□□□□ -1.57
VIM-210ENST00000637053 NUDT12Q9BQG2 462 aa5.27□□□□□ -1.57
VIM-210ENST00000637053 TULP1O00294 542 aaPredicted RBP5.26□□□□□ -1.57
VIM-210ENST00000637053 NNTQ13423 1086 aa5.26□□□□□ -1.57
VIM-210ENST00000637053 SCARF1Q14162 830 aa5.26□□□□□ -1.57
VIM-210ENST00000637053 GPR161Q8N6U8 529 aaKnown RBP5.26□□□□□ -1.57
VIM-210ENST00000637053 HOXA2O43364 376 aa5.25□□□□□ -1.57
VIM-210ENST00000637053 TESPA1A2RU30 521 aaPredicted RBP5.24□□□□□ -1.57
VIM-210ENST00000637053 WDR4P57081 412 aaKnown RBP5.24□□□□□ -1.57
VIM-210ENST00000637053 LINC01559Q495D7 138 aa5.24□□□□□ -1.57
VIM-210ENST00000637053 GPAT2Q6NUI2 795 aa5.24□□□□□ -1.57
VIM-210ENST00000637053 MAN1A2O60476 641 aa5.23□□□□□ -1.57
VIM-210ENST00000637053 USP46P62068 366 aa5.23□□□□□ -1.57
VIM-210ENST00000637053 BAP1Q92560 729 aa5.23□□□□□ -1.57
VIM-210ENST00000637053 CNTNAP3BQ96NU0 1288 aa5.23□□□□□ -1.57
VIM-210ENST00000637053 CNTNAP3Q9BZ76 1288 aa5.23□□□□□ -1.57
VIM-210ENST00000637053 ADH1CP00326 375 aa5.22□□□□□ -1.57
VIM-210ENST00000637053 ZNF385CQ66K41 422 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms