RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 KDM2AQ9Y2K7 1162 aa26.63■■□□□ 1.85
CLN6-210ENST00000635747 KNDC1Q76NI1 1749 aa26.62■■□□□ 1.85
CLN6-210ENST00000635747 RGS17Q9UGC6 210 aaPredicted RBP26.61■■□□□ 1.85
CLN6-210ENST00000635747 CDC42BPGQ6DT37 1551 aa26.6■■□□□ 1.85
CLN6-210ENST00000635747 ORAI2Q96SN7 254 aa26.6■■□□□ 1.85
CLN6-210ENST00000635747 NHSL1Q5SYE7 1610 aa26.59■■□□□ 1.85
CLN6-210ENST00000635747 PLEKHH1Q9ULM0 1364 aa26.58■■□□□ 1.84
CLN6-210ENST00000635747 SHPRHQ149N8 1683 aa26.57■■□□□ 1.84
CLN6-210ENST00000635747 MEX3CQ5U5Q3 659 aaKnown RBP26.57■■□□□ 1.84
CLN6-210ENST00000635747 ESCO1Q5FWF5 840 aa26.56■■□□□ 1.84
CLN6-210ENST00000635747 DDX17Q92841 729 aaKnown RBP26.56■■□□□ 1.84
CLN6-210ENST00000635747 POGKQ9P215 609 aa26.54■■□□□ 1.84
CLN6-210ENST00000635747 SOS2Q07890 1332 aaPredicted RBP26.54■■□□□ 1.84
CLN6-210ENST00000635747 PRAM1Q96QH2 718 aa26.53■■□□□ 1.84
CLN6-210ENST00000635747 NPHP3Q7Z494 1330 aa26.53■■□□□ 1.84
CLN6-210ENST00000635747 DLC1Q96QB1 1528 aa26.51■■□□□ 1.83
CLN6-210ENST00000635747 NUTM2BA6NNL0 878 aaPredicted RBP26.5■■□□□ 1.83
CLN6-210ENST00000635747 NUTM2EB1AL46 878 aaPredicted RBP26.5■■□□□ 1.83
CLN6-210ENST00000635747 NUTM2AQ8IVF1 878 aaPredicted RBP26.5■■□□□ 1.83
CLN6-210ENST00000635747 PNPLA6Q8IY17 1366 aa26.49■■□□□ 1.83
CLN6-210ENST00000635747 POTEAQ6S8J7 498 aa26.49■■□□□ 1.83
CLN6-210ENST00000635747 TRAK1Q9UPV9 953 aa26.49■■□□□ 1.83
CLN6-210ENST00000635747 LRP6O75581 1613 aa26.49■■□□□ 1.83
CLN6-210ENST00000635747 ADGRB1O14514 1584 aa26.49■■□□□ 1.83
CLN6-210ENST00000635747 NUTM2FA1L443 756 aa26.48■■□□□ 1.83
CLN6-210ENST00000635747 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
CLN6-210ENST00000635747 SAFB2Q14151 953 aaKnown RBP eCLIP26.47■■□□□ 1.83
CLN6-210ENST00000635747 FOXO3O43524 673 aa26.46■■□□□ 1.83
CLN6-210ENST00000635747 FMN2Q9NZ56 1722 aa26.42■■□□□ 1.82
CLN6-210ENST00000635747 PHF8Q9UPP1 1060 aa26.4■■□□□ 1.82
CLN6-210ENST00000635747 EIF3AQ14152 1382 aaKnown RBP26.38■■□□□ 1.81
CLN6-210ENST00000635747 PXDNQ92626 1479 aa26.37■■□□□ 1.81
CLN6-210ENST00000635747 ANKARQ7Z5J8 1434 aa26.37■■□□□ 1.81
CLN6-210ENST00000635747 KIF1AQ12756 1690 aa26.36■■□□□ 1.81
CLN6-210ENST00000635747 PSME1Q06323 249 aa26.36■■□□□ 1.81
CLN6-210ENST00000635747 TRIM26Q12899 539 aaPredicted RBP26.36■■□□□ 1.81
CLN6-210ENST00000635747 MINK1Q8N4C8 1332 aaPredicted RBP26.36■■□□□ 1.81
CLN6-210ENST00000635747 ADGRB2O60241 1585 aa26.35■■□□□ 1.81
CLN6-210ENST00000635747 XPCQ01831 940 aaPredicted RBP26.35■■□□□ 1.81
CLN6-210ENST00000635747 KRT28Q7Z3Y7 464 aa26.35■■□□□ 1.81
CLN6-210ENST00000635747 C8orf37Q96NL8 207 aa26.35■■□□□ 1.81
CLN6-210ENST00000635747 HIRIP3Q9BW71 556 aaPredicted RBP26.35■■□□□ 1.81
CLN6-210ENST00000635747 AFF2P51816 1311 aa26.35■■□□□ 1.81
CLN6-210ENST00000635747 WASLO00401 505 aaPredicted RBP26.34■■□□□ 1.81
CLN6-210ENST00000635747 ADAMTS2O95450 1211 aa26.33■■□□□ 1.81
CLN6-210ENST00000635747 KIAA1210Q9ULL0 1709 aa26.33■■□□□ 1.81
CLN6-210ENST00000635747 L3MBTL2Q969R5 705 aa26.32■■□□□ 1.8
CLN6-210ENST00000635747 NGLY1Q96IV0 654 aa26.32■■□□□ 1.8
CLN6-210ENST00000635747 SIN3AQ96ST3 1273 aa26.32■■□□□ 1.8
CLN6-210ENST00000635747 SPATA31A3Q5VYP0 1347 aa26.31■■□□□ 1.8
CLN6-210ENST00000635747 COL22A1Q8NFW1 1626 aaPredicted RBP26.3■■□□□ 1.8
CLN6-210ENST00000635747 NEUROD1Q13562 356 aa26.3■■□□□ 1.8
CLN6-210ENST00000635747 RXRBP28702 533 aa26.29■■□□□ 1.8
CLN6-210ENST00000635747 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
CLN6-210ENST00000635747 SBNO1A3KN83 1393 aa26.26■■□□□ 1.79
CLN6-210ENST00000635747 PMFBP1Q8TBY8 1022 aa26.26■■□□□ 1.79
CLN6-210ENST00000635747 TULP4Q9NRJ4 1543 aa26.25■■□□□ 1.79
CLN6-210ENST00000635747 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
CLN6-210ENST00000635747 ARHGEF28Q8N1W1 1705 aaKnown RBP26.25■■□□□ 1.79
CLN6-210ENST00000635747 RGPD8O14715 1765 aaPredicted RBP26.24■■□□□ 1.79
CLN6-210ENST00000635747 TNS3Q68CZ2 1445 aa26.23■■□□□ 1.79
CLN6-210ENST00000635747 FNBP4Q8N3X1 1017 aaPredicted RBP26.23■■□□□ 1.79
CLN6-210ENST00000635747 GPRASP1Q5JY77 1395 aa26.22■■□□□ 1.79
CLN6-210ENST00000635747 PRR36Q9H6K5 1346 aa26.22■■□□□ 1.79
CLN6-210ENST00000635747 USP21Q9UK80 565 aa26.22■■□□□ 1.79
CLN6-210ENST00000635747 ARHGEF10O15013 1369 aa26.21■■□□□ 1.79
CLN6-210ENST00000635747 USP32Q8NFA0 1604 aa26.21■■□□□ 1.79
CLN6-210ENST00000635747 RBM6P78332 1123 aaKnown RBP26.21■■□□□ 1.79
CLN6-210ENST00000635747 CDK19Q9BWU1 502 aa26.21■■□□□ 1.79
CLN6-210ENST00000635747 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.78
CLN6-210ENST00000635747 NUDT16Q96DE0 195 aaKnown RBP26.2■■□□□ 1.78
CLN6-210ENST00000635747 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
CLN6-210ENST00000635747 CDK12Q9NYV4 1490 aaPredicted RBP26.19■■□□□ 1.78
CLN6-210ENST00000635747 LMOD2Q6P5Q4 547 aa26.19■■□□□ 1.78
CLN6-210ENST00000635747 HAP1P54257 671 aaPredicted RBP26.18■■□□□ 1.78
CLN6-210ENST00000635747 TRPC5Q9UL62 973 aaPredicted RBP26.18■■□□□ 1.78
CLN6-210ENST00000635747 CCDC61Q9Y6R9 512 aa26.16■■□□□ 1.78
CLN6-210ENST00000635747 ATP7BP35670 1465 aa26.13■■□□□ 1.77
CLN6-210ENST00000635747 ROCK2O75116 1388 aaKnown RBP26.13■■□□□ 1.77
CLN6-210ENST00000635747 TONSLQ96HA7 1378 aa26.1■■□□□ 1.77
CLN6-210ENST00000635747 SRPK2P78362 688 aaKnown RBP26.1■■□□□ 1.77
CLN6-210ENST00000635747 ITSN1Q15811 1721 aa26.09■■□□□ 1.77
CLN6-210ENST00000635747 PLEKHG3A1L390 1219 aa26.09■■□□□ 1.77
CLN6-210ENST00000635747 PAK3O75914 559 aaPredicted RBP26.09■■□□□ 1.77
CLN6-210ENST00000635747 CABLES1Q8TDN4 633 aa26.09■■□□□ 1.77
CLN6-210ENST00000635747 ATRNO75882 1429 aa26.08■■□□□ 1.77
CLN6-210ENST00000635747 TRPM1Q7Z4N2 1603 aa26.08■■□□□ 1.77
CLN6-210ENST00000635747 BCL9LQ86UU0 1499 aa26.08■■□□□ 1.77
CLN6-210ENST00000635747 MARF1Q9Y4F3 1742 aaKnown RBP26.08■■□□□ 1.76
CLN6-210ENST00000635747 UNC5CLQ8IV45 518 aa26.07■■□□□ 1.76
CLN6-210ENST00000635747 POLR3AO14802 1390 aaPredicted RBP26.07■■□□□ 1.76
CLN6-210ENST00000635747 ACEP12821 1306 aa26.06■■□□□ 1.76
CLN6-210ENST00000635747 PLEKHG5O94827 1062 aa26.05■■□□□ 1.76
CLN6-210ENST00000635747 NBPF8Q3BBV2 869 aa26.05■■□□□ 1.76
CLN6-210ENST00000635747 TRPM3Q9HCF6 1732 aaPredicted RBP26.05■■□□□ 1.76
CLN6-210ENST00000635747 SLIT2O94813 1529 aa26.04■■□□□ 1.76
CLN6-210ENST00000635747 EVC2Q86UK5 1308 aa26.04■■□□□ 1.76
CLN6-210ENST00000635747 GJD4Q96KN9 370 aaPredicted RBP26.03■■□□□ 1.76
CLN6-210ENST00000635747 CABP2Q9NPB3 220 aa26.03■■□□□ 1.76
CLN6-210ENST00000635747 RGS12O14924 1447 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms