RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 AAASQ9NRG9 546 aa5.92□□□□□ -1.46
PSPC1-208ENST00000635562 TOR4AQ9NXH8 423 aa5.92□□□□□ -1.46
PSPC1-208ENST00000635562 CD46P15529 392 aa5.91□□□□□ -1.46
PSPC1-208ENST00000635562 REPIN1Q9BWE0 567 aaKnown RBP5.91□□□□□ -1.46
PSPC1-208ENST00000635562 SMCPP49901 116 aaPredicted RBP5.9□□□□□ -1.46
PSPC1-208ENST00000635562 MMP16P51512 607 aa5.9□□□□□ -1.46
PSPC1-208ENST00000635562 PHOX2BQ99453 314 aa5.9□□□□□ -1.46
PSPC1-208ENST00000635562 TTC24A2A3L6 582 aaPredicted RBP5.89□□□□□ -1.47
PSPC1-208ENST00000635562 WNT7AO00755 349 aa5.89□□□□□ -1.47
PSPC1-208ENST00000635562 AXIN1O15169 862 aa5.89□□□□□ -1.47
PSPC1-208ENST00000635562 KDM4AO75164 1064 aa5.89□□□□□ -1.47
PSPC1-208ENST00000635562 RNF19BQ6ZMZ0 732 aa5.89□□□□□ -1.47
PSPC1-208ENST00000635562 USB1Q9BQ65 265 aaKnown RBP5.89□□□□□ -1.47
PSPC1-208ENST00000635562 MINK1Q8N4C8 1332 aaPredicted RBP5.89□□□□□ -1.47
PSPC1-208ENST00000635562 ST8SIA5O15466 376 aa5.88□□□□□ -1.47
PSPC1-208ENST00000635562 TRIM32Q13049 653 aa5.88□□□□□ -1.47
PSPC1-208ENST00000635562 NLRP7Q8WX94 980 aa5.88□□□□□ -1.47
PSPC1-208ENST00000635562 PRDM9Q9NQV7 894 aa5.88□□□□□ -1.47
PSPC1-208ENST00000635562 IRF6O14896 467 aa5.87□□□□□ -1.47
PSPC1-208ENST00000635562 DXOO77932 396 aaKnown RBP5.87□□□□□ -1.47
PSPC1-208ENST00000635562 SNIP1Q8TAD8 396 aaKnown RBP5.87□□□□□ -1.47
PSPC1-208ENST00000635562 CLCN1P35523 988 aa5.86□□□□□ -1.47
PSPC1-208ENST00000635562 WNT7BP56706 349 aa5.86□□□□□ -1.47
PSPC1-208ENST00000635562 TREML4Q6UXN2 200 aa5.86□□□□□ -1.47
PSPC1-208ENST00000635562 POTECB2RU33 542 aa5.85□□□□□ -1.47
PSPC1-208ENST00000635562 GPCPD1Q9NPB8 672 aa5.85□□□□□ -1.47
PSPC1-208ENST00000635562 HOXA2O43364 376 aa5.84□□□□□ -1.47
PSPC1-208ENST00000635562 ZC3H15Q8WU90 426 aaKnown RBP5.84□□□□□ -1.47
PSPC1-208ENST00000635562 SENP2Q9HC62 589 aa5.84□□□□□ -1.47
PSPC1-208ENST00000635562 C11orf95C9JLR9 678 aaPredicted RBP5.83□□□□□ -1.48
PSPC1-208ENST00000635562 MDM2Q00987 491 aaPredicted RBP5.83□□□□□ -1.48
PSPC1-208ENST00000635562 KRI1Q8N9T8 703 aaKnown RBP5.83□□□□□ -1.48
PSPC1-208ENST00000635562 SMPD1P17405 629 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 JUNDP17535 347 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 NUTM1Q86Y26 1132 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 CCDC102AQ96A19 550 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 KIFC2Q96AC6 838 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 MRGPRX2Q96LB1 330 aa5.82□□□□□ -1.48
PSPC1-208ENST00000635562 GMPR2Q9P2T1 348 aaKnown RBP5.82□□□□□ -1.48
PSPC1-208ENST00000635562 RETREG3Q86VR2 466 aa5.81□□□□□ -1.48
PSPC1-208ENST00000635562 CCDC24Q8N4L8 307 aa5.81□□□□□ -1.48
PSPC1-208ENST00000635562 FAM217BQ9NTX9 383 aaPredicted RBP5.81□□□□□ -1.48
PSPC1-208ENST00000635562 ZMYND10O75800 440 aa5.8□□□□□ -1.48
PSPC1-208ENST00000635562 WFS1O76024 890 aa5.8□□□□□ -1.48
PSPC1-208ENST00000635562 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
PSPC1-208ENST00000635562 ATP13A2Q9NQ11 1180 aa5.8□□□□□ -1.48
PSPC1-208ENST00000635562 RC3H1Q5TC82 1133 aaKnown RBP5.79□□□□□ -1.48
PSPC1-208ENST00000635562 TRIM47Q96LD4 638 aa5.79□□□□□ -1.48
PSPC1-208ENST00000635562 INSM1Q01101 510 aaPredicted RBP5.78□□□□□ -1.48
PSPC1-208ENST00000635562 NUDT12Q9BQG2 462 aa5.78□□□□□ -1.48
PSPC1-208ENST00000635562 DACH1Q9UI36 760 aa5.78□□□□□ -1.48
PSPC1-208ENST00000635562 SPDYE5A6NIY4 337 aa5.77□□□□□ -1.49
PSPC1-208ENST00000635562 J3QL48 77 aa5.77□□□□□ -1.49
PSPC1-208ENST00000635562 WIPF1O43516 503 aa5.77□□□□□ -1.49
PSPC1-208ENST00000635562 FDX1P10109 184 aa5.77□□□□□ -1.49
PSPC1-208ENST00000635562 BARGINQ6ZT62 677 aa5.77□□□□□ -1.49
PSPC1-208ENST00000635562 CCNYL3P0C7X3 344 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 MS4A1P11836 297 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 SKOR1P84550 965 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 DIXDC1Q155Q3 683 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 PTPRNQ16849 979 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 EHBP1Q8NDI1 1231 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 HLA-CQ95604 372 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 STK17AQ9UEE5 414 aa5.76□□□□□ -1.49
PSPC1-208ENST00000635562 C6orf229H3BNL8 230 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 ALDH1A1P00352 501 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 GJA5P36382 358 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 NFX1Q12986 1120 aaKnown RBP5.75□□□□□ -1.49
PSPC1-208ENST00000635562 DESI1Q6ICB0 168 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 HPS1Q92902 700 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 SLC24A3Q9HC58 644 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 WASF2Q9Y6W5 498 aa5.75□□□□□ -1.49
PSPC1-208ENST00000635562 PLEKHG3A1L390 1219 aa5.74□□□□□ -1.49
PSPC1-208ENST00000635562 TERTO14746 1132 aaKnown RBP5.74□□□□□ -1.49
PSPC1-208ENST00000635562 SLC16A10Q8TF71 515 aa5.74□□□□□ -1.49
PSPC1-208ENST00000635562 SSTR3P32745 418 aaPredicted RBP5.73□□□□□ -1.49
PSPC1-208ENST00000635562 GUCA2AQ02747 115 aa5.73□□□□□ -1.49
PSPC1-208ENST00000635562 TTLL12Q14166 644 aaPredicted RBP5.73□□□□□ -1.49
PSPC1-208ENST00000635562 NPAS3Q8IXF0 933 aa5.73□□□□□ -1.49
PSPC1-208ENST00000635562 MPNDQ8N594 471 aa5.73□□□□□ -1.49
PSPC1-208ENST00000635562 BRPF1P55201 1214 aaPredicted RBP5.72□□□□□ -1.49
PSPC1-208ENST00000635562 MTMR2Q13614 643 aa5.72□□□□□ -1.49
PSPC1-208ENST00000635562 AMHR2Q16671 573 aa5.72□□□□□ -1.49
PSPC1-208ENST00000635562 SPIRE2Q8WWL2 714 aa5.72□□□□□ -1.49
PSPC1-208ENST00000635562 SYMPKQ92797 1274 aaKnown RBP5.72□□□□□ -1.49
PSPC1-208ENST00000635562 EVA1BQ9NVM1 165 aa5.72□□□□□ -1.49
PSPC1-208ENST00000635562 FAM181BA6NEQ2 426 aa5.71□□□□□ -1.5
PSPC1-208ENST00000635562 CAPN5O15484 640 aaPredicted RBP5.71□□□□□ -1.5
PSPC1-208ENST00000635562 SIAH2O43255 324 aa5.71□□□□□ -1.5
PSPC1-208ENST00000635562 SNRPBP14678 240 aaKnown RBP5.71□□□□□ -1.5
PSPC1-208ENST00000635562 VARSP26640 1264 aaKnown RBP5.71□□□□□ -1.5
PSPC1-208ENST00000635562 UNC93B1Q9H1C4 597 aa5.71□□□□□ -1.5
PSPC1-208ENST00000635562 PCDHGC3Q9UN70 934 aa5.71□□□□□ -1.5
PSPC1-208ENST00000635562 SH3BP2P78314 561 aa5.7□□□□□ -1.5
PSPC1-208ENST00000635562 KCNH2Q12809 1159 aa5.7□□□□□ -1.5
PSPC1-208ENST00000635562 PTCRAQ6ISU1 281 aaPredicted RBP5.7□□□□□ -1.5
PSPC1-208ENST00000635562 PRR7Q8TB68 274 aa5.7□□□□□ -1.5
PSPC1-208ENST00000635562 GIGYF2Q6Y7W6 1299 aaKnown RBP5.69□□□□□ -1.5
PSPC1-208ENST00000635562 ZNF511Q8NB15 262 aa5.69□□□□□ -1.5
PSPC1-208ENST00000635562 IRF7Q92985 503 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms