RNA–Protein interactions for RNA: ENST00000634386.1

CD55-210, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 5

Gene CD55, Length 951 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-210ENST00000634386 PCDHGC3Q9UN70 934 aa12□□□□□ -0.49
CD55-210ENST00000634386 SYMPKQ92797 1274 aaKnown RBP11.98□□□□□ -0.49
CD55-210ENST00000634386 PRDM9Q9NQV7 894 aa11.98□□□□□ -0.49
CD55-210ENST00000634386 GJA5P36382 358 aa11.97□□□□□ -0.49
CD55-210ENST00000634386 RSBN1LQ6PCB5 846 aaPredicted RBP11.97□□□□□ -0.49
CD55-210ENST00000634386 V9GY48 417 aaPredicted RBP11.97□□□□□ -0.49
CD55-210ENST00000634386 C6orf229H3BNL8 230 aa11.96□□□□□ -0.49
CD55-210ENST00000634386 SPTLC1O15269 473 aa11.95□□□□□ -0.5
CD55-210ENST00000634386 MYSM1Q5VVJ2 828 aa11.95□□□□□ -0.5
CD55-210ENST00000634386 RETREG3Q86VR2 466 aa11.95□□□□□ -0.5
CD55-210ENST00000634386 MMP16P51512 607 aa11.94□□□□□ -0.5
CD55-210ENST00000634386 RIC3Q7Z5B4 369 aa11.94□□□□□ -0.5
CD55-210ENST00000634386 FCF1Q9Y324 198 aaKnown RBP11.94□□□□□ -0.5
CD55-210ENST00000634386 NEUROD2Q15784 382 aa11.93□□□□□ -0.5
CD55-210ENST00000634386 DDRGK1Q96HY6 314 aa11.93□□□□□ -0.5
CD55-210ENST00000634386 FAM117AQ9C073 453 aa11.93□□□□□ -0.5
CD55-210ENST00000634386 RSPH6AQ9H0K4 717 aa11.93□□□□□ -0.5
CD55-210ENST00000634386 SLC19A1P41440 591 aa11.92□□□□□ -0.5
CD55-210ENST00000634386 MTMR2Q13614 643 aa11.92□□□□□ -0.5
CD55-210ENST00000634386 DXOO77932 396 aaKnown RBP11.91□□□□□ -0.5
CD55-210ENST00000634386 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
CD55-210ENST00000634386 EMID1Q96A84 441 aaPredicted RBP11.91□□□□□ -0.5
CD55-210ENST00000634386 PCDHB15Q9Y5E8 787 aa11.91□□□□□ -0.5
CD55-210ENST00000634386 SPDYE5A6NIY4 337 aa11.9□□□□□ -0.5
CD55-210ENST00000634386 LIMD1Q9UGP4 676 aa11.9□□□□□ -0.5
CD55-210ENST00000634386 JUNDP17535 347 aa11.89□□□□□ -0.51
CD55-210ENST00000634386 LIAT1Q6ZQX7 453 aa11.89□□□□□ -0.51
CD55-210ENST00000634386 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
CD55-210ENST00000634386 CSPP1Q1MSJ5 1256 aa11.88□□□□□ -0.51
CD55-210ENST00000634386 ZBTB3Q9H5J0 574 aa11.88□□□□□ -0.51
CD55-210ENST00000634386 PRKCSHP14314 528 aaPredicted RBP11.87□□□□□ -0.51
CD55-210ENST00000634386 HRCP23327 699 aa11.87□□□□□ -0.51
CD55-210ENST00000634386 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
CD55-210ENST00000634386 TUSC1Q2TAM9 212 aa11.87□□□□□ -0.51
CD55-210ENST00000634386 PRPF38BQ5VTL8 546 aaKnown RBP11.87□□□□□ -0.51
CD55-210ENST00000634386 PRR7Q8TB68 274 aa11.87□□□□□ -0.51
CD55-210ENST00000634386 PLEKHG3A1L390 1219 aa11.86□□□□□ -0.51
CD55-210ENST00000634386 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
CD55-210ENST00000634386 IRX2Q9BZI1 471 aaPredicted RBP11.86□□□□□ -0.51
CD55-210ENST00000634386 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
CD55-210ENST00000634386 SH3D19Q5HYK7 790 aa11.84□□□□□ -0.51
CD55-210ENST00000634386 CABLES1Q8TDN4 633 aa11.84□□□□□ -0.51
CD55-210ENST00000634386 ZBTB24O43167 697 aaPredicted RBP11.83□□□□□ -0.52
CD55-210ENST00000634386 RPIAP49247 311 aa11.83□□□□□ -0.52
CD55-210ENST00000634386 SKIV2LQ15477 1246 aaKnown RBP11.83□□□□□ -0.52
CD55-210ENST00000634386 ZNF598Q86UK7 904 aaKnown RBP11.83□□□□□ -0.52
CD55-210ENST00000634386 CCDC24Q8N4L8 307 aa11.83□□□□□ -0.52
CD55-210ENST00000634386 NUTM2BA6NNL0 878 aaPredicted RBP11.82□□□□□ -0.52
CD55-210ENST00000634386 NUTM2EB1AL46 878 aaPredicted RBP11.82□□□□□ -0.52
CD55-210ENST00000634386 QPCTQ16769 361 aa11.82□□□□□ -0.52
CD55-210ENST00000634386 NUTM2DQ5VT03 806 aaPredicted RBP11.82□□□□□ -0.52
CD55-210ENST00000634386 DESI1Q6ICB0 168 aa11.82□□□□□ -0.52
CD55-210ENST00000634386 NUTM2AQ8IVF1 878 aaPredicted RBP11.82□□□□□ -0.52
CD55-210ENST00000634386 NUDT12Q9BQG2 462 aa11.82□□□□□ -0.52
CD55-210ENST00000634386 LILRB3O75022 631 aa11.81□□□□□ -0.52
CD55-210ENST00000634386 CFAP99D6REC4 459 aa11.8□□□□□ -0.52
CD55-210ENST00000634386 ZNF697Q5TEC3 545 aa11.8□□□□□ -0.52
CD55-210ENST00000634386 CD2BP2O95400 341 aaKnown RBP11.79□□□□□ -0.52
CD55-210ENST00000634386 PTPRNQ16849 979 aa11.79□□□□□ -0.52
CD55-210ENST00000634386 IL27Q8NEV9 243 aa11.78□□□□□ -0.52
CD55-210ENST00000634386 ATP1B4Q9UN42 357 aaPredicted RBP11.78□□□□□ -0.52
CD55-210ENST00000634386 CCNYL3P0C7X3 344 aa11.77□□□□□ -0.53
CD55-210ENST00000634386 GFRA3O60609 400 aa11.76□□□□□ -0.53
CD55-210ENST00000634386 LAPTM4AQ15012 233 aa11.76□□□□□ -0.53
CD55-210ENST00000634386 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
CD55-210ENST00000634386 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
CD55-210ENST00000634386 TRIM32Q13049 653 aa11.75□□□□□ -0.53
CD55-210ENST00000634386 TSC1Q92574 1164 aa11.75□□□□□ -0.53
CD55-210ENST00000634386 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.75□□□□□ -0.53
CD55-210ENST00000634386 GOPCQ9HD26 462 aa11.75□□□□□ -0.53
CD55-210ENST00000634386 PDZRN3Q9UPQ7 1066 aa11.75□□□□□ -0.53
CD55-210ENST00000634386 LYPD8Q6UX82 237 aa11.74□□□□□ -0.53
CD55-210ENST00000634386 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
CD55-210ENST00000634386 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
CD55-210ENST00000634386 PTCRAQ6ISU1 281 aaPredicted RBP11.73□□□□□ -0.53
CD55-210ENST00000634386 HELBQ8NG08 1087 aaPredicted RBP11.73□□□□□ -0.53
CD55-210ENST00000634386 NRG2O14511 850 aaPredicted RBP11.72□□□□□ -0.53
CD55-210ENST00000634386 GDF9O60383 454 aa11.72□□□□□ -0.53
CD55-210ENST00000634386 KCNH2Q12809 1159 aa11.72□□□□□ -0.53
CD55-210ENST00000634386 PRR20EP86478 221 aa11.71□□□□□ -0.53
CD55-210ENST00000634386 PRR20CP86479 221 aa11.71□□□□□ -0.53
CD55-210ENST00000634386 PRR20DP86480 221 aa11.71□□□□□ -0.53
CD55-210ENST00000634386 PRR20BP86481 221 aa11.71□□□□□ -0.53
CD55-210ENST00000634386 PRR20AP86496 221 aa11.71□□□□□ -0.53
CD55-210ENST00000634386 FOXC1Q12948 553 aa11.7□□□□□ -0.54
CD55-210ENST00000634386 PPP2R2DQ66LE6 453 aa11.7□□□□□ -0.54
CD55-210ENST00000634386 PCMTD1Q96MG8 357 aaPredicted RBP11.7□□□□□ -0.54
CD55-210ENST00000634386 TNFRSF10AO00220 468 aa11.69□□□□□ -0.54
CD55-210ENST00000634386 PER1O15534 1290 aaPredicted RBP11.69□□□□□ -0.54
CD55-210ENST00000634386 UNC93B1Q9H1C4 597 aa11.69□□□□□ -0.54
CD55-210ENST00000634386 PKD2L1Q9P0L9 805 aa11.69□□□□□ -0.54
CD55-210ENST00000634386 CTHP32929 405 aa11.68□□□□□ -0.54
CD55-210ENST00000634386 FBXO31Q5XUX0 539 aaPredicted RBP11.68□□□□□ -0.54
CD55-210ENST00000634386 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
CD55-210ENST00000634386 WNT7BP56706 349 aa11.67□□□□□ -0.54
CD55-210ENST00000634386 Q6ZNB5 142 aa11.66□□□□□ -0.54
CD55-210ENST00000634386 WNT7AO00755 349 aa11.65□□□□□ -0.54
CD55-210ENST00000634386 SKOR1P84550 965 aa11.65□□□□□ -0.54
CD55-210ENST00000634386 MAP10Q9P2G4 905 aa11.65□□□□□ -0.54
CD55-210ENST00000634386 CTDSPL2Q05D32 466 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms