RNA–Protein interactions for RNA: ENST00000630701.1

APOC3-205, Transcript of apolipoprotein C3, humanhuman

TSL 1 (best) BASIC

Gene APOC3, Length 541 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC3-205ENST00000630701 SBNO2Q9Y2G9 1366 aa29.5■■■□□ 2.31
APOC3-205ENST00000630701 SLC24A1O60721 1099 aa29.49■■■□□ 2.31
APOC3-205ENST00000630701 ADGRL3Q9HAR2 1447 aa29.48■■■□□ 2.31
APOC3-205ENST00000630701 C19orf44Q9H6X5 657 aa29.47■■■□□ 2.31
APOC3-205ENST00000630701 MINK1Q8N4C8 1332 aaPredicted RBP29.46■■■□□ 2.31
APOC3-205ENST00000630701 QRICH2Q9H0J4 1663 aa29.45■■■□□ 2.31
APOC3-205ENST00000630701 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.45■■■□□ 2.3
APOC3-205ENST00000630701 MSH6P52701 1360 aa29.44■■■□□ 2.3
APOC3-205ENST00000630701 TESK2Q96S53 571 aa29.44■■■□□ 2.3
APOC3-205ENST00000630701 HIRIP3Q9BW71 556 aaPredicted RBP29.42■■■□□ 2.3
APOC3-205ENST00000630701 ADGRB2O60241 1585 aa29.42■■■□□ 2.3
APOC3-205ENST00000630701 DCCP43146 1447 aa29.41■■■□□ 2.3
APOC3-205ENST00000630701 XIRP1Q702N8 1843 aaKnown RBP29.41■■■□□ 2.3
APOC3-205ENST00000630701 NALCNQ8IZF0 1738 aa29.4■■■□□ 2.3
APOC3-205ENST00000630701 IQSEC2Q5JU85 1478 aa29.39■■■□□ 2.3
APOC3-205ENST00000630701 EVC2Q86UK5 1308 aa29.39■■■□□ 2.3
APOC3-205ENST00000630701 WASLO00401 505 aaPredicted RBP29.38■■■□□ 2.29
APOC3-205ENST00000630701 CERKQ8TCT0 537 aa29.38■■■□□ 2.29
APOC3-205ENST00000630701 CDC42BPGQ6DT37 1551 aa29.38■■■□□ 2.29
APOC3-205ENST00000630701 ATF3P18847 181 aa29.37■■■□□ 2.29
APOC3-205ENST00000630701 CADPS2Q86UW7 1296 aa29.37■■■□□ 2.29
APOC3-205ENST00000630701 TMF1P82094 1093 aa29.36■■■□□ 2.29
APOC3-205ENST00000630701 CDK19Q9BWU1 502 aa29.34■■■□□ 2.29
APOC3-205ENST00000630701 TULP4Q9NRJ4 1543 aa29.32■■■□□ 2.28
APOC3-205ENST00000630701 CDCA8Q53HL2 280 aa29.31■■■□□ 2.28
APOC3-205ENST00000630701 SRPK2P78362 688 aaKnown RBP29.3■■■□□ 2.28
APOC3-205ENST00000630701 PUS7Q96PZ0 661 aaKnown RBP29.3■■■□□ 2.28
APOC3-205ENST00000630701 DISP3Q9P2K9 1392 aa29.28■■■□□ 2.28
APOC3-205ENST00000630701 ANKARQ7Z5J8 1434 aa29.27■■■□□ 2.28
APOC3-205ENST00000630701 FMN2Q9NZ56 1722 aa29.26■■■□□ 2.27
APOC3-205ENST00000630701 CABP2Q9NPB3 220 aa29.26■■■□□ 2.27
APOC3-205ENST00000630701 MST1RQ04912 1400 aa29.24■■■□□ 2.27
APOC3-205ENST00000630701 ATAD2Q6PL18 1390 aa29.24■■■□□ 2.27
APOC3-205ENST00000630701 TOM1O60784 492 aa29.23■■■□□ 2.27
APOC3-205ENST00000630701 NUDT16Q96DE0 195 aaKnown RBP29.23■■■□□ 2.27
APOC3-205ENST00000630701 SLAIN2Q9P270 581 aa29.23■■■□□ 2.27
APOC3-205ENST00000630701 NUTM2FA1L443 756 aa29.22■■■□□ 2.27
APOC3-205ENST00000630701 C1orf167Q5SNV9 1468 aa29.22■■■□□ 2.27
APOC3-205ENST00000630701 PRR36Q9H6K5 1346 aa29.2■■■□□ 2.27
APOC3-205ENST00000630701 CCDC61Q9Y6R9 512 aa29.2■■■□□ 2.26
APOC3-205ENST00000630701 ATP7BP35670 1465 aa29.2■■■□□ 2.26
APOC3-205ENST00000630701 C11orf95C9JLR9 678 aaPredicted RBP29.19■■■□□ 2.26
APOC3-205ENST00000630701 UBAP1LF5GYI3 381 aa29.17■■■□□ 2.26
APOC3-205ENST00000630701 KIF7Q2M1P5 1343 aa29.17■■■□□ 2.26
APOC3-205ENST00000630701 USP32Q8NFA0 1604 aa29.16■■■□□ 2.26
APOC3-205ENST00000630701 ESCO1Q5FWF5 840 aa29.15■■■□□ 2.26
APOC3-205ENST00000630701 NINLQ9Y2I6 1382 aa29.13■■■□□ 2.25
APOC3-205ENST00000630701 CCDC7Q96M83 1385 aa29.13■■■□□ 2.25
APOC3-205ENST00000630701 PPIP5K1Q6PFW1 1433 aa29.12■■■□□ 2.25
APOC3-205ENST00000630701 ORAI2Q96SN7 254 aa29.12■■■□□ 2.25
APOC3-205ENST00000630701 POLR3GLQ9BT43 218 aa29.12■■■□□ 2.25
APOC3-205ENST00000630701 PLEKHG3A1L390 1219 aa29.11■■■□□ 2.25
APOC3-205ENST00000630701 CABP1Q9NZU7 370 aa29.11■■■□□ 2.25
APOC3-205ENST00000630701 PHF8Q9UPP1 1060 aa29.11■■■□□ 2.25
APOC3-205ENST00000630701 WASHC2AQ641Q2 1341 aa29.11■■■□□ 2.25
APOC3-205ENST00000630701 TOPAZ1Q8N9V7 1692 aa29.1■■■□□ 2.25
APOC3-205ENST00000630701 ZNF316A6NFI3 1004 aaPredicted RBP29.1■■■□□ 2.25
APOC3-205ENST00000630701 BRINP3Q76B58 766 aa29.1■■■□□ 2.25
APOC3-205ENST00000630701 TMC1Q8TDI8 760 aa29.1■■■□□ 2.25
APOC3-205ENST00000630701 ITSN1Q15811 1721 aa29.1■■■□□ 2.25
APOC3-205ENST00000630701 RGPD8O14715 1765 aaPredicted RBP29.07■■■□□ 2.24
APOC3-205ENST00000630701 SLC12A5Q9H2X9 1139 aa29.07■■■□□ 2.24
APOC3-205ENST00000630701 PIP4K2BP78356 416 aa29.05■■■□□ 2.24
APOC3-205ENST00000630701 PMFBP1Q8TBY8 1022 aa29.05■■■□□ 2.24
APOC3-205ENST00000630701 KIF1AQ12756 1690 aa29.05■■■□□ 2.24
APOC3-205ENST00000630701 POLR3AO14802 1390 aaPredicted RBP29.04■■■□□ 2.24
APOC3-205ENST00000630701 NGDNQ8NEJ9 315 aaKnown RBP29.04■■■□□ 2.24
APOC3-205ENST00000630701 TERF2IPQ9NYB0 399 aa29.03■■■□□ 2.24
APOC3-205ENST00000630701 ACEP12821 1306 aa29.02■■■□□ 2.24
APOC3-205ENST00000630701 SCAF1Q9H7N4 1312 aaKnown RBP29.01■■■□□ 2.23
APOC3-205ENST00000630701 ROBO1Q9Y6N7 1651 aa29.01■■■□□ 2.23
APOC3-205ENST00000630701 NPHP3Q7Z494 1330 aa29■■■□□ 2.23
APOC3-205ENST00000630701 FOXO3O43524 673 aa29■■■□□ 2.23
APOC3-205ENST00000630701 HDGFL2Q7Z4V5 671 aaPredicted RBP29■■■□□ 2.23
APOC3-205ENST00000630701 ZNF692Q9BU19 519 aaPredicted RBP29■■■□□ 2.23
APOC3-205ENST00000630701 ANKRD36BQ8N2N9 1353 aa28.99■■■□□ 2.23
APOC3-205ENST00000630701 MYOM1P52179 1685 aa28.99■■■□□ 2.23
APOC3-205ENST00000630701 CPSF1Q10570 1443 aaKnown RBP28.98■■■□□ 2.23
APOC3-205ENST00000630701 CD163L1Q9NR16 1453 aa28.97■■■□□ 2.23
APOC3-205ENST00000630701 PSME1Q06323 249 aa28.97■■■□□ 2.23
APOC3-205ENST00000630701 A0A1W2PP64 1363 aa28.95■■■□□ 2.22
APOC3-205ENST00000630701 BRD4O60885 1362 aaPredicted RBP28.93■■■□□ 2.22
APOC3-205ENST00000630701 KTN1Q86UP2 1357 aaKnown RBP28.93■■■□□ 2.22
APOC3-205ENST00000630701 PANK3Q9H999 370 aa28.93■■■□□ 2.22
APOC3-205ENST00000630701 AHDC1Q5TGY3 1603 aaPredicted RBP28.92■■■□□ 2.22
APOC3-205ENST00000630701 KRT28Q7Z3Y7 464 aa28.92■■■□□ 2.22
APOC3-205ENST00000630701 USP6P35125 1406 aa28.92■■■□□ 2.22
APOC3-205ENST00000630701 DDX17Q92841 729 aaKnown RBP28.91■■■□□ 2.22
APOC3-205ENST00000630701 SOS2Q07890 1332 aaPredicted RBP28.91■■■□□ 2.22
APOC3-205ENST00000630701 NHSL1Q5SYE7 1610 aa28.91■■■□□ 2.22
APOC3-205ENST00000630701 AKAP12Q02952 1782 aa28.89■■■□□ 2.22
APOC3-205ENST00000630701 PXDNQ92626 1479 aa28.89■■■□□ 2.22
APOC3-205ENST00000630701 XPCQ01831 940 aaPredicted RBP28.88■■■□□ 2.21
APOC3-205ENST00000630701 FBXO41Q8TF61 875 aa28.88■■■□□ 2.21
APOC3-205ENST00000630701 EDC4Q6P2E9 1401 aaKnown RBP28.87■■■□□ 2.21
APOC3-205ENST00000630701 SBNO1A3KN83 1393 aa28.87■■■□□ 2.21
APOC3-205ENST00000630701 CARD14Q9BXL6 1004 aa28.86■■■□□ 2.21
APOC3-205ENST00000630701 SSH2Q76I76 1423 aa28.86■■■□□ 2.21
APOC3-205ENST00000630701 MON2Q7Z3U7 1717 aa28.85■■■□□ 2.21
APOC3-205ENST00000630701 DDX10Q13206 875 aaKnown RBP28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms