RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.56
CHD2-213ENST00000628118 ASXL1Q8IXJ9 1541 aa11.52□□□□□ -0.57
CHD2-213ENST00000628118 DLC1Q96QB1 1528 aa11.52□□□□□ -0.57
CHD2-213ENST00000628118 XIRP1Q702N8 1843 aaKnown RBP11.52□□□□□ -0.57
CHD2-213ENST00000628118 C19orf44Q9H6X5 657 aa11.52□□□□□ -0.57
CHD2-213ENST00000628118 ADGRB1O14514 1584 aa11.52□□□□□ -0.57
CHD2-213ENST00000628118 UBAP1LF5GYI3 381 aa11.5□□□□□ -0.57
CHD2-213ENST00000628118 TMEM132EQ6IEE7 984 aa11.5□□□□□ -0.57
CHD2-213ENST00000628118 C14orf37Q86TY3 774 aa11.5□□□□□ -0.57
CHD2-213ENST00000628118 CADPS2Q86UW7 1296 aa11.5□□□□□ -0.57
CHD2-213ENST00000628118 ROBO2Q9HCK4 1378 aa11.5□□□□□ -0.57
CHD2-213ENST00000628118 ADGRL3Q9HAR2 1447 aa11.49□□□□□ -0.57
CHD2-213ENST00000628118 ATF3P18847 181 aa11.48□□□□□ -0.57
CHD2-213ENST00000628118 STK26Q9P289 416 aa11.48□□□□□ -0.57
CHD2-213ENST00000628118 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.46□□□□□ -0.57
CHD2-213ENST00000628118 TRPM1Q7Z4N2 1603 aa11.46□□□□□ -0.57
CHD2-213ENST00000628118 ROCK2O75116 1388 aaKnown RBP11.46□□□□□ -0.57
CHD2-213ENST00000628118 GPRASP1Q5JY77 1395 aa11.46□□□□□ -0.57
CHD2-213ENST00000628118 RBM33Q96EV2 1170 aaKnown RBP11.45□□□□□ -0.58
CHD2-213ENST00000628118 POGKQ9P215 609 aa11.45□□□□□ -0.58
CHD2-213ENST00000628118 TRAK1Q9UPV9 953 aa11.45□□□□□ -0.58
CHD2-213ENST00000628118 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 EIF3AQ14152 1382 aaKnown RBP11.44□□□□□ -0.58
CHD2-213ENST00000628118 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 NBPF8Q3BBV2 869 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 WAPLQ7Z5K2 1190 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 PRAM1Q96QH2 718 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 SPINK5Q9NQ38 1064 aaPredicted RBP11.44□□□□□ -0.58
CHD2-213ENST00000628118 SLAIN2Q9P270 581 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
CHD2-213ENST00000628118 NALCNQ8IZF0 1738 aa11.43□□□□□ -0.58
CHD2-213ENST00000628118 ATXN8OSP0DMR3 200 aa11.42□□□□□ -0.58
CHD2-213ENST00000628118 ILDR1Q86SU0 546 aaPredicted RBP11.42□□□□□ -0.58
CHD2-213ENST00000628118 ARHGEF28Q8N1W1 1705 aaKnown RBP11.42□□□□□ -0.58
CHD2-213ENST00000628118 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 ADGRB2O60241 1585 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 SLC24A1O60721 1099 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 PIP4K2BP78356 416 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 MST1RQ04912 1400 aa11.41□□□□□ -0.58
CHD2-213ENST00000628118 CENPJQ9HC77 1338 aaPredicted RBP11.4□□□□□ -0.58
CHD2-213ENST00000628118 ANKARQ7Z5J8 1434 aa11.39□□□□□ -0.59
CHD2-213ENST00000628118 C1orf167Q5SNV9 1468 aa11.38□□□□□ -0.59
CHD2-213ENST00000628118 CAPN15O75808 1086 aa11.38□□□□□ -0.59
CHD2-213ENST00000628118 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
CHD2-213ENST00000628118 FMN2Q9NZ56 1722 aa11.38□□□□□ -0.59
CHD2-213ENST00000628118 ROBO1Q9Y6N7 1651 aa11.37□□□□□ -0.59
CHD2-213ENST00000628118 WASLO00401 505 aaPredicted RBP11.37□□□□□ -0.59
CHD2-213ENST00000628118 SAFB2Q14151 953 aaKnown RBP eCLIP11.37□□□□□ -0.59
CHD2-213ENST00000628118 MINK1Q8N4C8 1332 aaPredicted RBP11.36□□□□□ -0.59
CHD2-213ENST00000628118 BRINP3Q76B58 766 aa11.36□□□□□ -0.59
CHD2-213ENST00000628118 ATF5Q9Y2D1 282 aaPredicted RBP11.36□□□□□ -0.59
CHD2-213ENST00000628118 AHDC1Q5TGY3 1603 aaPredicted RBP11.35□□□□□ -0.59
CHD2-213ENST00000628118 TULP4Q9NRJ4 1543 aa11.35□□□□□ -0.59
CHD2-213ENST00000628118 EVC2Q86UK5 1308 aa11.35□□□□□ -0.59
CHD2-213ENST00000628118 QRICH2Q9H0J4 1663 aa11.34□□□□□ -0.59
CHD2-213ENST00000628118 NPHP3Q7Z494 1330 aa11.34□□□□□ -0.59
CHD2-213ENST00000628118 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
CHD2-213ENST00000628118 HSPA1LP34931 641 aa11.33□□□□□ -0.6
CHD2-213ENST00000628118 ESCO1Q5FWF5 840 aa11.33□□□□□ -0.6
CHD2-213ENST00000628118 PUS7Q96PZ0 661 aaKnown RBP11.33□□□□□ -0.6
CHD2-213ENST00000628118 HIRIP3Q9BW71 556 aaPredicted RBP11.33□□□□□ -0.6
CHD2-213ENST00000628118 CDK19Q9BWU1 502 aa11.33□□□□□ -0.6
CHD2-213ENST00000628118 NHSL1Q5SYE7 1610 aa11.32□□□□□ -0.6
CHD2-213ENST00000628118 ZNF219Q9P2Y4 722 aaPredicted RBP11.32□□□□□ -0.6
CHD2-213ENST00000628118 PHLPP1O60346 1717 aa11.32□□□□□ -0.6
CHD2-213ENST00000628118 USP47Q96K76 1375 aa11.31□□□□□ -0.6
CHD2-213ENST00000628118 ORAI2Q96SN7 254 aa11.31□□□□□ -0.6
CHD2-213ENST00000628118 PHF8Q9UPP1 1060 aa11.31□□□□□ -0.6
CHD2-213ENST00000628118 CCDC61Q9Y6R9 512 aa11.31□□□□□ -0.6
CHD2-213ENST00000628118 ITSN1Q15811 1721 aa11.31□□□□□ -0.6
CHD2-213ENST00000628118 SOS2Q07890 1332 aaPredicted RBP11.31□□□□□ -0.6
CHD2-213ENST00000628118 ATAD2Q6PL18 1390 aa11.3□□□□□ -0.6
CHD2-213ENST00000628118 SRPK2P78362 688 aaKnown RBP11.3□□□□□ -0.6
CHD2-213ENST00000628118 LRRC59Q96AG4 307 aaKnown RBP11.3□□□□□ -0.6
CHD2-213ENST00000628118 NUDT16Q96DE0 195 aaKnown RBP11.3□□□□□ -0.6
CHD2-213ENST00000628118 ATP7BP35670 1465 aa11.3□□□□□ -0.6
CHD2-213ENST00000628118 JCADQ9P266 1359 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 COL16A1Q07092 1604 aaPredicted RBP11.29□□□□□ -0.6
CHD2-213ENST00000628118 USP32Q8NFA0 1604 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 ST20-MTHFSA0A0A6YYL1 179 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 NUTM2FA1L443 756 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 PSME1Q06323 249 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 PRR36Q9H6K5 1346 aa11.29□□□□□ -0.6
CHD2-213ENST00000628118 RGPD8O14715 1765 aaPredicted RBP11.28□□□□□ -0.6
CHD2-213ENST00000628118 PLEKHG3A1L390 1219 aa11.28□□□□□ -0.6
CHD2-213ENST00000628118 EIF4G2P78344 907 aaKnown RBP eCLIP11.28□□□□□ -0.6
CHD2-213ENST00000628118 CDCA8Q53HL2 280 aa11.28□□□□□ -0.6
CHD2-213ENST00000628118 TESK2Q96S53 571 aa11.28□□□□□ -0.6
CHD2-213ENST00000628118 BRD4O60885 1362 aaPredicted RBP11.28□□□□□ -0.6
CHD2-213ENST00000628118 FOXO3O43524 673 aa11.27□□□□□ -0.61
CHD2-213ENST00000628118 TMF1P82094 1093 aa11.27□□□□□ -0.61
CHD2-213ENST00000628118 SBNO1A3KN83 1393 aa11.27□□□□□ -0.61
CHD2-213ENST00000628118 TOPAZ1Q8N9V7 1692 aa11.27□□□□□ -0.61
CHD2-213ENST00000628118 NGDNQ8NEJ9 315 aaKnown RBP11.26□□□□□ -0.61
CHD2-213ENST00000628118 CABP2Q9NPB3 220 aa11.26□□□□□ -0.61
CHD2-213ENST00000628118 SPATA31A6Q5VVP1 1343 aa11.26□□□□□ -0.61
CHD2-213ENST00000628118 POLR3AO14802 1390 aaPredicted RBP11.26□□□□□ -0.61
CHD2-213ENST00000628118 NINLQ9Y2I6 1382 aa11.26□□□□□ -0.61
CHD2-213ENST00000628118 PXDNQ92626 1479 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms