RNA–Protein interactions for RNA: ENST00000625402.1

SCARNA4-202, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 129 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4-202ENST00000625402 ANKK1Q8NFD2 765 aa5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 GJD4Q96KN9 370 aaPredicted RBP5.49□□□□□ -1.53
SCARNA4-202ENST00000625402 NUTM2BA6NNL0 878 aaPredicted RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 NUTM2EB1AL46 878 aaPredicted RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 ACTN4O43707 911 aaKnown RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 TRAK2O60296 914 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 ATP6V1AP38606 617 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 HDGFP51858 240 aaKnown RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 MTMR2Q13614 643 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 NUTM2DQ5VT03 806 aaPredicted RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 RNF19BQ6ZMZ0 732 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 NUTM2AQ8IVF1 878 aaPredicted RBP5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 TBC1D2BQ9UPU7 963 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 HPS5Q9UPZ3 1129 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 SLC27A5Q9Y2P5 690 aa5.48□□□□□ -1.53
SCARNA4-202ENST00000625402 C6orf229H3BNL8 230 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 SOCS7O14512 581 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 SLC4A3P48751 1232 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 CTDSPL2Q05D32 466 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 KMT5BQ4FZB7 885 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 TRIM34Q9BYJ4 488 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 GDPD2Q9HCC8 539 aa5.47□□□□□ -1.53
SCARNA4-202ENST00000625402 APBB1O00213 710 aa5.46□□□□□ -1.54
SCARNA4-202ENST00000625402 BLOC1S3Q6QNY0 202 aa5.46□□□□□ -1.54
SCARNA4-202ENST00000625402 LRRN4Q8WUT4 740 aa5.46□□□□□ -1.54
SCARNA4-202ENST00000625402 WNT2BQ93097 391 aa5.46□□□□□ -1.54
SCARNA4-202ENST00000625402 PER1O15534 1290 aaPredicted RBP5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 PRR7Q8TB68 274 aa5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 EPS8L1Q8TE68 723 aa5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 TSC1Q92574 1164 aa5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 WBP1LQ9NX94 342 aa5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 PCDH10Q9P2E7 1040 aa5.45□□□□□ -1.54
SCARNA4-202ENST00000625402 IRF5Q13568 498 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 GRIPAP1Q4V328 841 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 THSD4Q6ZMP0 1018 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 RETREG3Q86VR2 466 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 CCDC82Q8N4S0 544 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 THAP11Q96EK4 314 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 ARID3AQ99856 593 aa5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 TSR3Q9UJK0 312 aaKnown RBP5.44□□□□□ -1.54
SCARNA4-202ENST00000625402 GOLGA8CPA6NN73 597 aa5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 POM121CA8CG34 1229 aa5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 RAD21O60216 631 aa5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 PPP4CP60510 307 aa5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 ARXQ96QS3 562 aa5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 ZNF777Q9ULD5 760 aaPredicted RBP5.43□□□□□ -1.54
SCARNA4-202ENST00000625402 ABL2P42684 1182 aa5.42□□□□□ -1.54
SCARNA4-202ENST00000625402 HELBQ8NG08 1087 aaPredicted RBP5.42□□□□□ -1.54
SCARNA4-202ENST00000625402 NECTIN2Q92692 538 aa5.42□□□□□ -1.54
SCARNA4-202ENST00000625402 KCTD12Q96CX2 325 aaKnown RBP5.42□□□□□ -1.54
SCARNA4-202ENST00000625402 PCDHB3Q9Y5E6 796 aa5.42□□□□□ -1.54
SCARNA4-202ENST00000625402 TLL1O43897 1013 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 BRICD5Q6PL45 260 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 SCUBE3Q8IX30 993 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 ADAMTS19Q8TE59 1207 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 PRR14Q9BWN1 585 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 PLSCR2Q9NRY7 297 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 NDUFB9Q9Y6M9 179 aa5.41□□□□□ -1.54
SCARNA4-202ENST00000625402 COPS2P61201 443 aa5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 NR6A1Q15406 480 aa5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 Q3C1V9 767 aa5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 STAC3Q96MF2 364 aa5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 USB1Q9BQ65 265 aaKnown RBP5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 PRDM9Q9NQV7 894 aa5.4□□□□□ -1.54
SCARNA4-202ENST00000625402 DESI1Q6ICB0 168 aa5.39□□□□□ -1.55
SCARNA4-202ENST00000625402 HOMEZQ8IX15 550 aa5.39□□□□□ -1.55
SCARNA4-202ENST00000625402 ZNF330Q9Y3S2 320 aaPredicted RBP5.39□□□□□ -1.55
SCARNA4-202ENST00000625402 SALL2Q9Y467 1007 aaPredicted RBP5.39□□□□□ -1.55
SCARNA4-202ENST00000625402 NR1I2O75469 434 aa5.38□□□□□ -1.55
SCARNA4-202ENST00000625402 F12P00748 615 aaPredicted RBP5.38□□□□□ -1.55
SCARNA4-202ENST00000625402 LYPD8Q6UX82 237 aa5.38□□□□□ -1.55
SCARNA4-202ENST00000625402 FAM160A2Q8N612 972 aaPredicted RBP5.38□□□□□ -1.55
SCARNA4-202ENST00000625402 MAP10Q9P2G4 905 aa5.38□□□□□ -1.55
SCARNA4-202ENST00000625402 FMNL1O95466 1100 aaPredicted RBP5.37□□□□□ -1.55
SCARNA4-202ENST00000625402 JUNDP17535 347 aa5.37□□□□□ -1.55
SCARNA4-202ENST00000625402 VAC14Q08AM6 782 aa5.37□□□□□ -1.55
SCARNA4-202ENST00000625402 GLMNQ92990 594 aa5.37□□□□□ -1.55
SCARNA4-202ENST00000625402 DXOO77932 396 aaKnown RBP5.36□□□□□ -1.55
SCARNA4-202ENST00000625402 MSS51Q4VC12 460 aa5.36□□□□□ -1.55
SCARNA4-202ENST00000625402 ZNF516Q92618 1163 aa5.36□□□□□ -1.55
SCARNA4-202ENST00000625402 MTRQ99707 1265 aa5.36□□□□□ -1.55
SCARNA4-202ENST00000625402 PTPN5P54829 565 aa5.35□□□□□ -1.55
SCARNA4-202ENST00000625402 PTPRNQ16849 979 aa5.35□□□□□ -1.55
SCARNA4-202ENST00000625402 TJAP1Q5JTD0 557 aa5.35□□□□□ -1.55
SCARNA4-202ENST00000625402 SPNS2Q8IVW8 549 aa5.35□□□□□ -1.55
SCARNA4-202ENST00000625402 SPSB2Q99619 263 aa5.35□□□□□ -1.55
SCARNA4-202ENST00000625402 ZPR1O75312 459 aa5.34□□□□□ -1.55
SCARNA4-202ENST00000625402 MMP16P51512 607 aa5.34□□□□□ -1.55
SCARNA4-202ENST00000625402 MYT1LQ9UL68 1186 aa5.34□□□□□ -1.55
SCARNA4-202ENST00000625402 ADH1BP00325 375 aa5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 FBXO45P0C2W1 286 aa5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 NYAP1Q6ZVC0 841 aa5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 NKX2-3Q8TAU0 364 aa5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 CCDC97Q96F63 343 aaPredicted RBP5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 CALR3Q96L12 384 aaKnown RBP5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 PRM3Q9NNZ6 103 aa5.33□□□□□ -1.56
SCARNA4-202ENST00000625402 CCNYL3P0C7X3 344 aa5.32□□□□□ -1.56
SCARNA4-202ENST00000625402 UCN2Q96RP3 112 aa5.32□□□□□ -1.56
SCARNA4-202ENST00000625402 NUDT12Q9BQG2 462 aa5.32□□□□□ -1.56
SCARNA4-202ENST00000625402 OCSTAMPQ9BR26 566 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms