RNA–Protein interactions for RNA: ENST00000624116.1

AC004943.3-201, humanhuman

BASIC

Gene AC004943.3, Length 600 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004943.3-201ENST00000624116 ZNF787Q6DD87 383 aa11.53□□□□□ -0.56
AC004943.3-201ENST00000624116 USB1Q9BQ65 265 aaKnown RBP11.53□□□□□ -0.56
AC004943.3-201ENST00000624116 FOXC1Q12948 553 aa11.52□□□□□ -0.57
AC004943.3-201ENST00000624116 HOXA2O43364 376 aa11.51□□□□□ -0.57
AC004943.3-201ENST00000624116 MMP16P51512 607 aa11.51□□□□□ -0.57
AC004943.3-201ENST00000624116 MYT1Q01538 1121 aa11.51□□□□□ -0.57
AC004943.3-201ENST00000624116 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
AC004943.3-201ENST00000624116 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
AC004943.3-201ENST00000624116 PKD2L1Q9P0L9 805 aa11.5□□□□□ -0.57
AC004943.3-201ENST00000624116 DXOO77932 396 aaKnown RBP11.47□□□□□ -0.57
AC004943.3-201ENST00000624116 CYP4X1Q8N118 509 aa11.47□□□□□ -0.57
AC004943.3-201ENST00000624116 TRIM32Q13049 653 aa11.44□□□□□ -0.58
AC004943.3-201ENST00000624116 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
AC004943.3-201ENST00000624116 ZMYND10O75800 440 aa11.43□□□□□ -0.58
AC004943.3-201ENST00000624116 TTLL12Q14166 644 aaPredicted RBP11.43□□□□□ -0.58
AC004943.3-201ENST00000624116 TOR4AQ9NXH8 423 aa11.43□□□□□ -0.58
AC004943.3-201ENST00000624116 WNT7AO00755 349 aa11.42□□□□□ -0.58
AC004943.3-201ENST00000624116 CRIPAKQ8N1N5 446 aa11.42□□□□□ -0.58
AC004943.3-201ENST00000624116 HLA-CQ95604 372 aa11.42□□□□□ -0.58
AC004943.3-201ENST00000624116 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
AC004943.3-201ENST00000624116 REPIN1Q9BWE0 567 aaKnown RBP11.41□□□□□ -0.58
AC004943.3-201ENST00000624116 TTC24A2A3L6 582 aaPredicted RBP11.4□□□□□ -0.58
AC004943.3-201ENST00000624116 AVPP01185 164 aa11.4□□□□□ -0.58
AC004943.3-201ENST00000624116 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
AC004943.3-201ENST00000624116 AMHR2Q16671 573 aa11.4□□□□□ -0.58
AC004943.3-201ENST00000624116 JUNDP17535 347 aa11.39□□□□□ -0.59
AC004943.3-201ENST00000624116 CTC1Q2NKJ3 1217 aa11.39□□□□□ -0.59
AC004943.3-201ENST00000624116 CCDC24Q8N4L8 307 aa11.39□□□□□ -0.59
AC004943.3-201ENST00000624116 ZC3H15Q8WU90 426 aaKnown RBP11.39□□□□□ -0.59
AC004943.3-201ENST00000624116 AAASQ9NRG9 546 aa11.39□□□□□ -0.59
AC004943.3-201ENST00000624116 FDX1P10109 184 aa11.38□□□□□ -0.59
AC004943.3-201ENST00000624116 GUCA2AQ02747 115 aa11.37□□□□□ -0.59
AC004943.3-201ENST00000624116 SNIP1Q8TAD8 396 aaKnown RBP11.37□□□□□ -0.59
AC004943.3-201ENST00000624116 WNT7BP56706 349 aa11.36□□□□□ -0.59
AC004943.3-201ENST00000624116 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
AC004943.3-201ENST00000624116 AXIN1O15169 862 aa11.35□□□□□ -0.59
AC004943.3-201ENST00000624116 ST8SIA5O15466 376 aa11.35□□□□□ -0.59
AC004943.3-201ENST00000624116 DIXDC1Q155Q3 683 aa11.35□□□□□ -0.59
AC004943.3-201ENST00000624116 GIGYF2Q6Y7W6 1299 aaKnown RBP11.34□□□□□ -0.59
AC004943.3-201ENST00000624116 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
AC004943.3-201ENST00000624116 NUDT12Q9BQG2 462 aa11.34□□□□□ -0.59
AC004943.3-201ENST00000624116 SMCPP49901 116 aaPredicted RBP11.33□□□□□ -0.6
AC004943.3-201ENST00000624116 SYMPKQ92797 1274 aaKnown RBP11.33□□□□□ -0.6
AC004943.3-201ENST00000624116 MRGPRX2Q96LB1 330 aa11.33□□□□□ -0.6
AC004943.3-201ENST00000624116 SPDYE5A6NIY4 337 aa11.32□□□□□ -0.6
AC004943.3-201ENST00000624116 ZNF775Q96BV0 537 aaPredicted RBP11.32□□□□□ -0.6
AC004943.3-201ENST00000624116 MS4A1P11836 297 aa11.3□□□□□ -0.6
AC004943.3-201ENST00000624116 PCDHGC3Q9UN70 934 aa11.3□□□□□ -0.6
AC004943.3-201ENST00000624116 CCNYL3P0C7X3 344 aa11.29□□□□□ -0.6
AC004943.3-201ENST00000624116 GJA5P36382 358 aa11.29□□□□□ -0.6
AC004943.3-201ENST00000624116 RC3H1Q5TC82 1133 aaKnown RBP11.29□□□□□ -0.6
AC004943.3-201ENST00000624116 BEGAINQ9BUH8 593 aa11.29□□□□□ -0.6
AC004943.3-201ENST00000624116 MOXD2PA6NHM9 499 aa11.28□□□□□ -0.6
AC004943.3-201ENST00000624116 SMPD1P17405 629 aa11.28□□□□□ -0.6
AC004943.3-201ENST00000624116 MTMR2Q13614 643 aa11.28□□□□□ -0.6
AC004943.3-201ENST00000624116 PTPRNQ16849 979 aa11.28□□□□□ -0.6
AC004943.3-201ENST00000624116 AK7Q96M32 723 aa11.28□□□□□ -0.6
AC004943.3-201ENST00000624116 POTECB2RU33 542 aa11.27□□□□□ -0.61
AC004943.3-201ENST00000624116 DESI1Q6ICB0 168 aa11.27□□□□□ -0.61
AC004943.3-201ENST00000624116 NDUFV2P19404 249 aa11.26□□□□□ -0.61
AC004943.3-201ENST00000624116 SKOR1P84550 965 aa11.25□□□□□ -0.61
AC004943.3-201ENST00000624116 PARP9Q8IXQ6 854 aa11.25□□□□□ -0.61
AC004943.3-201ENST00000624116 TRIM66O15016 1216 aa11.24□□□□□ -0.61
AC004943.3-201ENST00000624116 EHBP1Q8NDI1 1231 aa11.24□□□□□ -0.61
AC004943.3-201ENST00000624116 PRR7Q8TB68 274 aa11.24□□□□□ -0.61
AC004943.3-201ENST00000624116 J3QL48 77 aa11.23□□□□□ -0.61
AC004943.3-201ENST00000624116 TBC1D2Q9BYX2 928 aa11.23□□□□□ -0.61
AC004943.3-201ENST00000624116 EVA1BQ9NVM1 165 aa11.22□□□□□ -0.61
AC004943.3-201ENST00000624116 C11orf95C9JLR9 678 aaPredicted RBP11.21□□□□□ -0.61
AC004943.3-201ENST00000624116 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
AC004943.3-201ENST00000624116 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
AC004943.3-201ENST00000624116 GMPR2Q9P2T1 348 aaKnown RBP11.21□□□□□ -0.61
AC004943.3-201ENST00000624116 ALDH1A1P00352 501 aa11.2□□□□□ -0.62
AC004943.3-201ENST00000624116 UNC93B1Q9H1C4 597 aa11.2□□□□□ -0.62
AC004943.3-201ENST00000624116 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
AC004943.3-201ENST00000624116 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
AC004943.3-201ENST00000624116 KCNH2Q12809 1159 aa11.19□□□□□ -0.62
AC004943.3-201ENST00000624116 ZBTB3Q9H5J0 574 aa11.19□□□□□ -0.62
AC004943.3-201ENST00000624116 ATP13A2Q9NQ11 1180 aa11.19□□□□□ -0.62
AC004943.3-201ENST00000624116 PRPF38BQ5VTL8 546 aaKnown RBP11.18□□□□□ -0.62
AC004943.3-201ENST00000624116 HPS1Q92902 700 aa11.18□□□□□ -0.62
AC004943.3-201ENST00000624116 SPTLC1O15269 473 aa11.17□□□□□ -0.62
AC004943.3-201ENST00000624116 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
AC004943.3-201ENST00000624116 SH3BP2P78314 561 aa11.16□□□□□ -0.62
AC004943.3-201ENST00000624116 TREML4Q6UXN2 200 aa11.15□□□□□ -0.62
AC004943.3-201ENST00000624116 RIC3Q7Z5B4 369 aa11.15□□□□□ -0.62
AC004943.3-201ENST00000624116 KIFC2Q96AC6 838 aa11.15□□□□□ -0.62
AC004943.3-201ENST00000624116 SIAH2O43255 324 aa11.14□□□□□ -0.63
AC004943.3-201ENST00000624116 PDE4DQ08499 809 aa11.14□□□□□ -0.63
AC004943.3-201ENST00000624116 PLEKHG3A1L390 1219 aa11.13□□□□□ -0.63
AC004943.3-201ENST00000624116 VARSP26640 1264 aaKnown RBP11.13□□□□□ -0.63
AC004943.3-201ENST00000624116 LYPD8Q6UX82 237 aa11.13□□□□□ -0.63
AC004943.3-201ENST00000624116 ZNF511Q8NB15 262 aa11.13□□□□□ -0.63
AC004943.3-201ENST00000624116 TRIM47Q96LD4 638 aa11.13□□□□□ -0.63
AC004943.3-201ENST00000624116 HRCP23327 699 aa11.12□□□□□ -0.63
AC004943.3-201ENST00000624116 CTHP32929 405 aa11.12□□□□□ -0.63
AC004943.3-201ENST00000624116 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
AC004943.3-201ENST00000624116 BAP1Q92560 729 aa11.12□□□□□ -0.63
AC004943.3-201ENST00000624116 MPNDQ8N594 471 aa11.11□□□□□ -0.63
AC004943.3-201ENST00000624116 PCDHB15Q9Y5E8 787 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms