RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 EVC2Q86UK5 1308 aa10.94□□□□□ -0.66
SND1-IT1-201ENST00000623342 PREX1Q8TCU6 1659 aa10.93□□□□□ -0.66
SND1-IT1-201ENST00000623342 APAF1O14727 1248 aa10.93□□□□□ -0.66
SND1-IT1-201ENST00000623342 CRBNQ96SW2 442 aa10.93□□□□□ -0.66
SND1-IT1-201ENST00000623342 TRMT2AQ8IZ69 625 aaKnown RBP10.93□□□□□ -0.66
SND1-IT1-201ENST00000623342 TULP4Q9NRJ4 1543 aa10.92□□□□□ -0.66
SND1-IT1-201ENST00000623342 PLPPR3Q6T4P5 718 aa10.92□□□□□ -0.66
SND1-IT1-201ENST00000623342 TMEM131LA2VDJ0 1609 aa10.92□□□□□ -0.66
SND1-IT1-201ENST00000623342 TCERG1O14776 1098 aaKnown RBP10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 ERICH6Q7L0X2 663 aa10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 CGNL1Q0VF96 1302 aa10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 MLECQ14165 292 aa10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 ANKRD36BQ8N2N9 1353 aa10.91□□□□□ -0.66
SND1-IT1-201ENST00000623342 MYO5BQ9ULV0 1848 aa10.9□□□□□ -0.66
SND1-IT1-201ENST00000623342 SHPRHQ149N8 1683 aa10.9□□□□□ -0.66
SND1-IT1-201ENST00000623342 NKTRP30414 1462 aaKnown RBP10.9□□□□□ -0.67
SND1-IT1-201ENST00000623342 E9PSI1 815 aa10.9□□□□□ -0.67
SND1-IT1-201ENST00000623342 NSD2O96028 1365 aa10.89□□□□□ -0.67
SND1-IT1-201ENST00000623342 C20orf194Q5TEA3 1177 aa10.89□□□□□ -0.67
SND1-IT1-201ENST00000623342 TNNT2P45379 298 aaPredicted RBP10.89□□□□□ -0.67
SND1-IT1-201ENST00000623342 NINLQ9Y2I6 1382 aa10.88□□□□□ -0.67
SND1-IT1-201ENST00000623342 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
SND1-IT1-201ENST00000623342 CABP2Q9NPB3 220 aa10.88□□□□□ -0.67
SND1-IT1-201ENST00000623342 SPINK5Q9NQ38 1064 aaPredicted RBP10.88□□□□□ -0.67
SND1-IT1-201ENST00000623342 MS4A1P11836 297 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 CFAP53Q96M91 514 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 STK26Q9P289 416 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 PPP6R1Q9UPN7 881 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 AGLP35573 1532 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 PTPRMP28827 1452 aa10.87□□□□□ -0.67
SND1-IT1-201ENST00000623342 ANP32AP39687 249 aaKnown RBP10.86□□□□□ -0.67
SND1-IT1-201ENST00000623342 MTHFSP49914 203 aa10.86□□□□□ -0.67
SND1-IT1-201ENST00000623342 SAFB2Q14151 953 aaKnown RBP eCLIP10.86□□□□□ -0.67
SND1-IT1-201ENST00000623342 RUNDC1Q96C34 613 aa10.86□□□□□ -0.67
SND1-IT1-201ENST00000623342 WWC1Q8IX03 1113 aa10.86□□□□□ -0.67
SND1-IT1-201ENST00000623342 YTHDC2Q9H6S0 1430 aaKnown RBP10.85□□□□□ -0.67
SND1-IT1-201ENST00000623342 SRPK2P78362 688 aaKnown RBP10.85□□□□□ -0.67
SND1-IT1-201ENST00000623342 DMRT2Q9Y5R5 561 aa10.85□□□□□ -0.67
SND1-IT1-201ENST00000623342 ATAD2Q6PL18 1390 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 IQSEC2Q5JU85 1478 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 PDE4AP27815 886 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 PRAM1Q96QH2 718 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 POGKQ9P215 609 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 STAG3Q9UJ98 1225 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 NOP58Q9Y2X3 529 aaKnown RBP10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 A0A1W2PP64 1363 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 ABCC11Q96J66 1382 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 CLTCQ00610 1675 aaKnown RBP10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 KDM2BQ8NHM5 1336 aa10.84□□□□□ -0.67
SND1-IT1-201ENST00000623342 CENPQQ7L2Z9 268 aaPredicted RBP10.83□□□□□ -0.68
SND1-IT1-201ENST00000623342 TCP11L2Q8N4U5 519 aa10.83□□□□□ -0.68
SND1-IT1-201ENST00000623342 IPO9Q96P70 1041 aaKnown RBP10.83□□□□□ -0.68
SND1-IT1-201ENST00000623342 MINK1Q8N4C8 1332 aaPredicted RBP10.83□□□□□ -0.68
SND1-IT1-201ENST00000623342 BCAR3O75815 825 aa10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 BACH2Q9BYV9 841 aa10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 TERF2IPQ9NYB0 399 aa10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 NCBP3Q53F19 620 aaKnown RBP10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 WDR63Q8IWG1 891 aa10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 SPATA31D1Q6ZQQ2 1576 aa10.82□□□□□ -0.68
SND1-IT1-201ENST00000623342 NEUROD2Q15784 382 aa10.81□□□□□ -0.68
SND1-IT1-201ENST00000623342 CCDC27Q2M243 656 aa10.81□□□□□ -0.68
SND1-IT1-201ENST00000623342 RRP7AQ9Y3A4 280 aaKnown RBP10.81□□□□□ -0.68
SND1-IT1-201ENST00000623342 A2ML1A8K2U0 1454 aa10.81□□□□□ -0.68
SND1-IT1-201ENST00000623342 MED14O60244 1454 aa10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 CD163L1Q9NR16 1453 aa10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 ANKRD26Q9UPS8 1709 aa10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 U2AF1L5P0DN76 240 aaPredicted RBP10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 U2AF1Q01081 240 aaKnown RBP eCLIP10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 PDE3AQ14432 1141 aa10.8□□□□□ -0.68
SND1-IT1-201ENST00000623342 ARHGEF40Q8TER5 1519 aa10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 CDK19Q9BWU1 502 aa10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 DLC1Q96QB1 1528 aa10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 HDGFL2Q7Z4V5 671 aaPredicted RBP10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 GGNBP2Q9H3C7 697 aa10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 RIMS2Q9UQ26 1411 aa10.79□□□□□ -0.68
SND1-IT1-201ENST00000623342 ADGRB2O60241 1585 aa10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 FYB1O15117 783 aa10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 PAK3O75914 559 aaPredicted RBP10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 ZBTB47Q9UFB7 747 aaPredicted RBP10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 SKAP1Q86WV1 359 aa10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 NLRP1Q9C000 1473 aa10.78□□□□□ -0.68
SND1-IT1-201ENST00000623342 COL3A1P02461 1466 aaPredicted RBP10.77□□□□□ -0.69
SND1-IT1-201ENST00000623342 CANXP27824 592 aaKnown RBP10.77□□□□□ -0.69
SND1-IT1-201ENST00000623342 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
SND1-IT1-201ENST00000623342 MYH16Q9H6N6 1097 aa10.77□□□□□ -0.69
SND1-IT1-201ENST00000623342 SETD1AO15047 1707 aaKnown RBP10.76□□□□□ -0.69
SND1-IT1-201ENST00000623342 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
SND1-IT1-201ENST00000623342 CABP1Q9NZU7 370 aa10.76□□□□□ -0.69
SND1-IT1-201ENST00000623342 U2SURPO15042 1029 aaKnown RBP10.75□□□□□ -0.69
SND1-IT1-201ENST00000623342 KIF20BQ96Q89 1820 aa10.75□□□□□ -0.69
SND1-IT1-201ENST00000623342 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
SND1-IT1-201ENST00000623342 PLEKHF1Q96S99 279 aa10.75□□□□□ -0.69
SND1-IT1-201ENST00000623342 TRHP20396 242 aaPredicted RBP10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 CEBPAP49715 358 aaPredicted RBP10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 WAPLQ7Z5K2 1190 aa10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 PANK1Q8TE04 598 aa10.74□□□□□ -0.69
SND1-IT1-201ENST00000623342 ESF1Q9H501 851 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms