RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 ANTXR1Q9H6X2 564 aa16.65■□□□□ 0.26
CHD1L-210ENST00000622533 KIF1BO60333 1816 aa16.65■□□□□ 0.26
CHD1L-210ENST00000622533 VIRMAQ69YN4 1812 aaKnown RBP16.64■□□□□ 0.25
CHD1L-210ENST00000622533 CENPJQ9HC77 1338 aaPredicted RBP16.64■□□□□ 0.25
CHD1L-210ENST00000622533 BCAR3O75815 825 aa16.63■□□□□ 0.25
CHD1L-210ENST00000622533 RRP9O43818 475 aaKnown RBP16.63■□□□□ 0.25
CHD1L-210ENST00000622533 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
CHD1L-210ENST00000622533 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
CHD1L-210ENST00000622533 NRXN1Q9ULB1 1477 aa16.62■□□□□ 0.25
CHD1L-210ENST00000622533 ABCA9Q8IUA7 1624 aa16.62■□□□□ 0.25
CHD1L-210ENST00000622533 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
CHD1L-210ENST00000622533 ZMYM3Q14202 1370 aa16.61■□□□□ 0.25
CHD1L-210ENST00000622533 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
CHD1L-210ENST00000622533 CANXP27824 592 aaKnown RBP16.61■□□□□ 0.25
CHD1L-210ENST00000622533 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
CHD1L-210ENST00000622533 EFCAB6Q5THR3 1501 aa16.6■□□□□ 0.25
CHD1L-210ENST00000622533 CARD14Q9BXL6 1004 aa16.6■□□□□ 0.25
CHD1L-210ENST00000622533 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
CHD1L-210ENST00000622533 KIF3BO15066 747 aa16.6■□□□□ 0.25
CHD1L-210ENST00000622533 FANCAO15360 1455 aa16.6■□□□□ 0.25
CHD1L-210ENST00000622533 WWC1Q8IX03 1113 aa16.59■□□□□ 0.25
CHD1L-210ENST00000622533 TBC1D2Q9BYX2 928 aa16.59■□□□□ 0.25
CHD1L-210ENST00000622533 MROH1Q8NDA8 1641 aa16.59■□□□□ 0.25
CHD1L-210ENST00000622533 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
CHD1L-210ENST00000622533 PMFBP1Q8TBY8 1022 aa16.59■□□□□ 0.25
CHD1L-210ENST00000622533 LMTK2Q8IWU2 1503 aa16.58■□□□□ 0.25
CHD1L-210ENST00000622533 ADGRF5Q8IZF2 1346 aa16.58■□□□□ 0.24
CHD1L-210ENST00000622533 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
CHD1L-210ENST00000622533 MCM4P33991 863 aa16.56■□□□□ 0.24
CHD1L-210ENST00000622533 USP32Q8NFA0 1604 aa16.56■□□□□ 0.24
CHD1L-210ENST00000622533 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
CHD1L-210ENST00000622533 ADGRL1O94910 1474 aa16.56■□□□□ 0.24
CHD1L-210ENST00000622533 MORC1Q86VD1 984 aa16.56■□□□□ 0.24
CHD1L-210ENST00000622533 ERBB4Q15303 1308 aa16.55■□□□□ 0.24
CHD1L-210ENST00000622533 NLRP1Q9C000 1473 aa16.55■□□□□ 0.24
CHD1L-210ENST00000622533 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
CHD1L-210ENST00000622533 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 SHPRHQ149N8 1683 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 CCDC27Q2M243 656 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 TRAK2O60296 914 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 PANK1Q8TE04 598 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 IQSEC2Q5JU85 1478 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 UGGT1Q9NYU2 1555 aa16.54■□□□□ 0.24
CHD1L-210ENST00000622533 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
CHD1L-210ENST00000622533 PHF23Q9BUL5 403 aaPredicted RBP16.53■□□□□ 0.24
CHD1L-210ENST00000622533 DMRT2Q9Y5R5 561 aa16.53■□□□□ 0.24
CHD1L-210ENST00000622533 MROH2AA6NES4 1674 aa16.53■□□□□ 0.24
CHD1L-210ENST00000622533 PUS7Q96PZ0 661 aaKnown RBP16.52■□□□□ 0.24
CHD1L-210ENST00000622533 UPF2Q9HAU5 1272 aaKnown RBP16.52■□□□□ 0.24
CHD1L-210ENST00000622533 RARSP54136 660 aaKnown RBP16.52■□□□□ 0.24
CHD1L-210ENST00000622533 ZC3H13Q5T200 1668 aaKnown RBP16.52■□□□□ 0.24
CHD1L-210ENST00000622533 PPRC1Q5VV67 1664 aaKnown RBP16.52■□□□□ 0.23
CHD1L-210ENST00000622533 ESPNB1AK53 854 aa16.52■□□□□ 0.23
CHD1L-210ENST00000622533 TBC1D32Q96NH3 1257 aa16.51■□□□□ 0.23
CHD1L-210ENST00000622533 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
CHD1L-210ENST00000622533 NSD2O96028 1365 aa16.5■□□□□ 0.23
CHD1L-210ENST00000622533 NOS1P29475 1434 aa16.5■□□□□ 0.23
CHD1L-210ENST00000622533 RPGRIP1LQ68CZ1 1315 aa16.5■□□□□ 0.23
CHD1L-210ENST00000622533 QRICH2Q9H0J4 1663 aa16.5■□□□□ 0.23
CHD1L-210ENST00000622533 MRE11P49959 708 aa16.5■□□□□ 0.23
CHD1L-210ENST00000622533 GRPEL1Q9HAV7 217 aa16.49■□□□□ 0.23
CHD1L-210ENST00000622533 TCP11L2Q8N4U5 519 aa16.49■□□□□ 0.23
CHD1L-210ENST00000622533 C14orf93Q9H972 538 aaKnown RBP16.49■□□□□ 0.23
CHD1L-210ENST00000622533 ZNF518AQ6AHZ1 1483 aa16.49■□□□□ 0.23
CHD1L-210ENST00000622533 RWDD1Q9H446 243 aaPredicted RBP16.49■□□□□ 0.23
CHD1L-210ENST00000622533 CT47B1P0C2W7 299 aaPredicted RBP16.48■□□□□ 0.23
CHD1L-210ENST00000622533 PPLO60437 1756 aa16.48■□□□□ 0.23
CHD1L-210ENST00000622533 KIDINS220Q9ULH0 1771 aa16.47■□□□□ 0.23
CHD1L-210ENST00000622533 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
CHD1L-210ENST00000622533 NEUROD2Q15784 382 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 TRIM44Q96DX7 344 aaPredicted RBP16.44■□□□□ 0.22
CHD1L-210ENST00000622533 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
CHD1L-210ENST00000622533 CHMP5Q9NZZ3 219 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 SLC12A5Q9H2X9 1139 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 TNNQ9UQP3 1299 aa16.44■□□□□ 0.22
CHD1L-210ENST00000622533 MTHFSP49914 203 aa16.43■□□□□ 0.22
CHD1L-210ENST00000622533 PCDHB15Q9Y5E8 787 aa16.43■□□□□ 0.22
CHD1L-210ENST00000622533 ANKRD36BQ8N2N9 1353 aa16.43■□□□□ 0.22
CHD1L-210ENST00000622533 EVC2Q86UK5 1308 aa16.43■□□□□ 0.22
CHD1L-210ENST00000622533 CHGAP10645 457 aaKnown RBP16.42■□□□□ 0.22
CHD1L-210ENST00000622533 GAS2L3Q86XJ1 694 aa16.42■□□□□ 0.22
CHD1L-210ENST00000622533 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
CHD1L-210ENST00000622533 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
CHD1L-210ENST00000622533 ADGRB2O60241 1585 aa16.42■□□□□ 0.22
CHD1L-210ENST00000622533 TNNT2P45379 298 aaPredicted RBP16.41■□□□□ 0.22
CHD1L-210ENST00000622533 CFAP74Q9C0B2 1584 aa16.41■□□□□ 0.22
CHD1L-210ENST00000622533 NPATQ14207 1427 aa16.41■□□□□ 0.22
CHD1L-210ENST00000622533 MVPQ14764 893 aaKnown RBP16.41■□□□□ 0.22
CHD1L-210ENST00000622533 ZKSCAN2Q63HK3 967 aa16.41■□□□□ 0.22
CHD1L-210ENST00000622533 RLBP1P12271 317 aa16.4■□□□□ 0.22
CHD1L-210ENST00000622533 KIAA1211Q6ZU35 1233 aa16.39■□□□□ 0.21
CHD1L-210ENST00000622533 C22orf23Q9BZE7 217 aa16.39■□□□□ 0.21
CHD1L-210ENST00000622533 FTSJ3Q8IY81 847 aaKnown RBP16.39■□□□□ 0.21
CHD1L-210ENST00000622533 BCL2L13Q9BXK5 485 aa16.39■□□□□ 0.21
CHD1L-210ENST00000622533 ASXL2Q76L83 1435 aa16.38■□□□□ 0.21
CHD1L-210ENST00000622533 GLI2P10070 1586 aa16.38■□□□□ 0.21
CHD1L-210ENST00000622533 DZIP1LQ8IYY4 767 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms