RNA–Protein interactions for RNA: ENST00000622063.4

CHRDL2-210, Transcript of chordin like 2, humanhuman

TSL 5 BASIC

Gene CHRDL2, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-210ENST00000622063 USP47Q96K76 1375 aa28.94■■■□□ 2.22
CHRDL2-210ENST00000622063 NCOA3Q9Y6Q9 1424 aa28.93■■■□□ 2.22
CHRDL2-210ENST00000622063 ST20-MTHFSA0A0A6YYL1 179 aa28.89■■■□□ 2.21
CHRDL2-210ENST00000622063 CERKQ8TCT0 537 aa28.89■■■□□ 2.21
CHRDL2-210ENST00000622063 C19orf44Q9H6X5 657 aa28.88■■■□□ 2.21
CHRDL2-210ENST00000622063 MINK1Q8N4C8 1332 aaPredicted RBP28.87■■■□□ 2.21
CHRDL2-210ENST00000622063 MSH6P52701 1360 aa28.87■■■□□ 2.21
CHRDL2-210ENST00000622063 ADGRL3Q9HAR2 1447 aa28.86■■■□□ 2.21
CHRDL2-210ENST00000622063 XIRP1Q702N8 1843 aaKnown RBP28.86■■■□□ 2.21
CHRDL2-210ENST00000622063 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.85■■■□□ 2.21
CHRDL2-210ENST00000622063 ATF3P18847 181 aa28.82■■■□□ 2.2
CHRDL2-210ENST00000622063 NALCNQ8IZF0 1738 aa28.82■■■□□ 2.2
CHRDL2-210ENST00000622063 QRICH2Q9H0J4 1663 aa28.81■■■□□ 2.2
CHRDL2-210ENST00000622063 IQSEC2Q5JU85 1478 aa28.79■■■□□ 2.2
CHRDL2-210ENST00000622063 CADPS2Q86UW7 1296 aa28.79■■■□□ 2.2
CHRDL2-210ENST00000622063 SBNO2Q9Y2G9 1366 aa28.78■■■□□ 2.2
CHRDL2-210ENST00000622063 TESK2Q96S53 571 aa28.77■■■□□ 2.2
CHRDL2-210ENST00000622063 DCCP43146 1447 aa28.77■■■□□ 2.2
CHRDL2-210ENST00000622063 WASLO00401 505 aaPredicted RBP28.77■■■□□ 2.2
CHRDL2-210ENST00000622063 SLC24A1O60721 1099 aa28.77■■■□□ 2.2
CHRDL2-210ENST00000622063 ADGRB2O60241 1585 aa28.75■■■□□ 2.19
CHRDL2-210ENST00000622063 EVC2Q86UK5 1308 aa28.74■■■□□ 2.19
CHRDL2-210ENST00000622063 CDC42BPGQ6DT37 1551 aa28.74■■■□□ 2.19
CHRDL2-210ENST00000622063 C11orf95C9JLR9 678 aaPredicted RBP28.74■■■□□ 2.19
CHRDL2-210ENST00000622063 CDK19Q9BWU1 502 aa28.74■■■□□ 2.19
CHRDL2-210ENST00000622063 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
CHRDL2-210ENST00000622063 NUTM2FA1L443 756 aa28.71■■■□□ 2.19
CHRDL2-210ENST00000622063 TOM1O60784 492 aa28.7■■■□□ 2.19
CHRDL2-210ENST00000622063 SRPK2P78362 688 aaKnown RBP28.7■■■□□ 2.19
CHRDL2-210ENST00000622063 TMF1P82094 1093 aa28.7■■■□□ 2.19
CHRDL2-210ENST00000622063 DDX10Q13206 875 aaKnown RBP28.7■■■□□ 2.18
CHRDL2-210ENST00000622063 UBAP1LF5GYI3 381 aa28.69■■■□□ 2.18
CHRDL2-210ENST00000622063 SLAIN2Q9P270 581 aa28.68■■■□□ 2.18
CHRDL2-210ENST00000622063 CCDC7Q96M83 1385 aa28.68■■■□□ 2.18
CHRDL2-210ENST00000622063 TULP4Q9NRJ4 1543 aa28.68■■■□□ 2.18
CHRDL2-210ENST00000622063 CABP2Q9NPB3 220 aa28.67■■■□□ 2.18
CHRDL2-210ENST00000622063 MST1RQ04912 1400 aa28.65■■■□□ 2.18
CHRDL2-210ENST00000622063 FMN2Q9NZ56 1722 aa28.64■■■□□ 2.18
CHRDL2-210ENST00000622063 DISP3Q9P2K9 1392 aa28.64■■■□□ 2.17
CHRDL2-210ENST00000622063 NUDT16Q96DE0 195 aaKnown RBP28.63■■■□□ 2.17
CHRDL2-210ENST00000622063 KIF7Q2M1P5 1343 aa28.62■■■□□ 2.17
CHRDL2-210ENST00000622063 C1orf167Q5SNV9 1468 aa28.62■■■□□ 2.17
CHRDL2-210ENST00000622063 CDCA8Q53HL2 280 aa28.62■■■□□ 2.17
CHRDL2-210ENST00000622063 ANKARQ7Z5J8 1434 aa28.61■■■□□ 2.17
CHRDL2-210ENST00000622063 PRR36Q9H6K5 1346 aa28.6■■■□□ 2.17
CHRDL2-210ENST00000622063 PIP4K2BP78356 416 aa28.6■■■□□ 2.17
CHRDL2-210ENST00000622063 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
CHRDL2-210ENST00000622063 MIER1Q8N108 512 aa28.6■■■□□ 2.17
CHRDL2-210ENST00000622063 PUS7Q96PZ0 661 aaKnown RBP28.58■■■□□ 2.17
CHRDL2-210ENST00000622063 CCDC61Q9Y6R9 512 aa28.58■■■□□ 2.17
CHRDL2-210ENST00000622063 SCAF1Q9H7N4 1312 aaKnown RBP28.58■■■□□ 2.17
CHRDL2-210ENST00000622063 ATP7BP35670 1465 aa28.58■■■□□ 2.17
CHRDL2-210ENST00000622063 ORAI2Q96SN7 254 aa28.58■■■□□ 2.16
CHRDL2-210ENST00000622063 ATAD2Q6PL18 1390 aa28.57■■■□□ 2.16
CHRDL2-210ENST00000622063 USP32Q8NFA0 1604 aa28.55■■■□□ 2.16
CHRDL2-210ENST00000622063 POLR3GLQ9BT43 218 aa28.54■■■□□ 2.16
CHRDL2-210ENST00000622063 BRINP3Q76B58 766 aa28.54■■■□□ 2.16
CHRDL2-210ENST00000622063 PMFBP1Q8TBY8 1022 aa28.52■■■□□ 2.16
CHRDL2-210ENST00000622063 PHF8Q9UPP1 1060 aa28.52■■■□□ 2.16
CHRDL2-210ENST00000622063 RGPD8O14715 1765 aaPredicted RBP28.52■■■□□ 2.16
CHRDL2-210ENST00000622063 TMC1Q8TDI8 760 aa28.51■■■□□ 2.16
CHRDL2-210ENST00000622063 CABP1Q9NZU7 370 aa28.51■■■□□ 2.16
CHRDL2-210ENST00000622063 PPIP5K1Q6PFW1 1433 aa28.51■■■□□ 2.15
CHRDL2-210ENST00000622063 PLEKHG3A1L390 1219 aa28.48■■■□□ 2.15
CHRDL2-210ENST00000622063 ITSN1Q15811 1721 aa28.47■■■□□ 2.15
CHRDL2-210ENST00000622063 ROBO1Q9Y6N7 1651 aa28.47■■■□□ 2.15
CHRDL2-210ENST00000622063 NGDNQ8NEJ9 315 aaKnown RBP28.47■■■□□ 2.15
CHRDL2-210ENST00000622063 FOXO3O43524 673 aa28.46■■■□□ 2.15
CHRDL2-210ENST00000622063 SLC12A5Q9H2X9 1139 aa28.46■■■□□ 2.15
CHRDL2-210ENST00000622063 TOPAZ1Q8N9V7 1692 aa28.46■■■□□ 2.15
CHRDL2-210ENST00000622063 NINLQ9Y2I6 1382 aa28.44■■■□□ 2.14
CHRDL2-210ENST00000622063 ACEP12821 1306 aa28.43■■■□□ 2.14
CHRDL2-210ENST00000622063 KIF1AQ12756 1690 aa28.43■■■□□ 2.14
CHRDL2-210ENST00000622063 DDX17Q92841 729 aaKnown RBP28.42■■■□□ 2.14
CHRDL2-210ENST00000622063 PSME1Q06323 249 aa28.42■■■□□ 2.14
CHRDL2-210ENST00000622063 FBXO41Q8TF61 875 aa28.42■■■□□ 2.14
CHRDL2-210ENST00000622063 NPHP3Q7Z494 1330 aa28.41■■■□□ 2.14
CHRDL2-210ENST00000622063 POLR3AO14802 1390 aaPredicted RBP28.4■■■□□ 2.14
CHRDL2-210ENST00000622063 TERF2IPQ9NYB0 399 aa28.38■■■□□ 2.13
CHRDL2-210ENST00000622063 MYOM1P52179 1685 aa28.38■■■□□ 2.13
CHRDL2-210ENST00000622063 HDGFL2Q7Z4V5 671 aaPredicted RBP28.38■■■□□ 2.13
CHRDL2-210ENST00000622063 XPCQ01831 940 aaPredicted RBP28.37■■■□□ 2.13
CHRDL2-210ENST00000622063 ZNF692Q9BU19 519 aaPredicted RBP28.37■■■□□ 2.13
CHRDL2-210ENST00000622063 KRT28Q7Z3Y7 464 aa28.36■■■□□ 2.13
CHRDL2-210ENST00000622063 CPSF1Q10570 1443 aaKnown RBP28.33■■■□□ 2.13
CHRDL2-210ENST00000622063 NHSL1Q5SYE7 1610 aa28.33■■■□□ 2.13
CHRDL2-210ENST00000622063 CD163L1Q9NR16 1453 aa28.33■■■□□ 2.13
CHRDL2-210ENST00000622063 KTN1Q86UP2 1357 aaKnown RBP28.33■■■□□ 2.12
CHRDL2-210ENST00000622063 ANKRD36BQ8N2N9 1353 aa28.33■■■□□ 2.12
CHRDL2-210ENST00000622063 AHDC1Q5TGY3 1603 aaPredicted RBP28.32■■■□□ 2.12
CHRDL2-210ENST00000622063 A0A1W2PP64 1363 aa28.32■■■□□ 2.12
CHRDL2-210ENST00000622063 SOS2Q07890 1332 aaPredicted RBP28.32■■■□□ 2.12
CHRDL2-210ENST00000622063 PAK3O75914 559 aaPredicted RBP28.29■■■□□ 2.12
CHRDL2-210ENST00000622063 PXDNQ92626 1479 aa28.29■■■□□ 2.12
CHRDL2-210ENST00000622063 USP6P35125 1406 aa28.29■■■□□ 2.12
CHRDL2-210ENST00000622063 HSPA1LP34931 641 aa28.29■■■□□ 2.12
CHRDL2-210ENST00000622063 PANK3Q9H999 370 aa28.29■■■□□ 2.12
CHRDL2-210ENST00000622063 ANP32CO43423 234 aa28.28■■■□□ 2.12
CHRDL2-210ENST00000622063 PHLPP1O60346 1717 aa28.28■■■□□ 2.12
CHRDL2-210ENST00000622063 LRRC59Q96AG4 307 aaKnown RBP28.26■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms