RNA–Protein interactions for RNA: ENST00000620759.1

CDKN3-212, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-212ENST00000620759 MDM2Q00987 491 aaPredicted RBP8.6□□□□□ -1.03
CDKN3-212ENST00000620759 USB1Q9BQ65 265 aaKnown RBP8.59□□□□□ -1.03
CDKN3-212ENST00000620759 AAASQ9NRG9 546 aa8.59□□□□□ -1.03
CDKN3-212ENST00000620759 TTC24A2A3L6 582 aaPredicted RBP8.58□□□□□ -1.04
CDKN3-212ENST00000620759 MMP16P51512 607 aa8.58□□□□□ -1.04
CDKN3-212ENST00000620759 CRIPAKQ8N1N5 446 aa8.58□□□□□ -1.04
CDKN3-212ENST00000620759 TOR4AQ9NXH8 423 aa8.58□□□□□ -1.04
CDKN3-212ENST00000620759 ST8SIA5O15466 376 aa8.57□□□□□ -1.04
CDKN3-212ENST00000620759 CLCN1P35523 988 aa8.57□□□□□ -1.04
CDKN3-212ENST00000620759 CTC1Q2NKJ3 1217 aa8.57□□□□□ -1.04
CDKN3-212ENST00000620759 KRI1Q8N9T8 703 aaKnown RBP8.57□□□□□ -1.04
CDKN3-212ENST00000620759 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
CDKN3-212ENST00000620759 AVPP01185 164 aa8.56□□□□□ -1.04
CDKN3-212ENST00000620759 TRIM32Q13049 653 aa8.56□□□□□ -1.04
CDKN3-212ENST00000620759 CCDC102AQ96A19 550 aa8.56□□□□□ -1.04
CDKN3-212ENST00000620759 WNT7AO00755 349 aa8.55□□□□□ -1.04
CDKN3-212ENST00000620759 AXIN1O15169 862 aa8.55□□□□□ -1.04
CDKN3-212ENST00000620759 HOXA2O43364 376 aa8.55□□□□□ -1.04
CDKN3-212ENST00000620759 POTECB2RU33 542 aa8.54□□□□□ -1.04
CDKN3-212ENST00000620759 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
CDKN3-212ENST00000620759 REPIN1Q9BWE0 567 aaKnown RBP8.54□□□□□ -1.04
CDKN3-212ENST00000620759 NUTM1Q86Y26 1132 aa8.53□□□□□ -1.04
CDKN3-212ENST00000620759 SNIP1Q8TAD8 396 aaKnown RBP8.53□□□□□ -1.04
CDKN3-212ENST00000620759 SMCPP49901 116 aaPredicted RBP8.52□□□□□ -1.05
CDKN3-212ENST00000620759 CCDC24Q8N4L8 307 aa8.52□□□□□ -1.05
CDKN3-212ENST00000620759 FAM217BQ9NTX9 383 aaPredicted RBP8.51□□□□□ -1.05
CDKN3-212ENST00000620759 JUNDP17535 347 aa8.49□□□□□ -1.05
CDKN3-212ENST00000620759 HLA-CQ95604 372 aa8.49□□□□□ -1.05
CDKN3-212ENST00000620759 MRGPRX2Q96LB1 330 aa8.49□□□□□ -1.05
CDKN3-212ENST00000620759 C11orf95C9JLR9 678 aaPredicted RBP8.48□□□□□ -1.05
CDKN3-212ENST00000620759 WNT7BP56706 349 aa8.48□□□□□ -1.05
CDKN3-212ENST00000620759 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
CDKN3-212ENST00000620759 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDKN3-212ENST00000620759 GMPR2Q9P2T1 348 aaKnown RBP8.47□□□□□ -1.05
CDKN3-212ENST00000620759 DACH1Q9UI36 760 aa8.47□□□□□ -1.05
CDKN3-212ENST00000620759 SMPD1P17405 629 aa8.46□□□□□ -1.06
CDKN3-212ENST00000620759 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
CDKN3-212ENST00000620759 RC3H1Q5TC82 1133 aaKnown RBP8.46□□□□□ -1.06
CDKN3-212ENST00000620759 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
CDKN3-212ENST00000620759 FDX1P10109 184 aa8.45□□□□□ -1.06
CDKN3-212ENST00000620759 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
CDKN3-212ENST00000620759 C6orf229H3BNL8 230 aa8.44□□□□□ -1.06
CDKN3-212ENST00000620759 J3QL48 77 aa8.43□□□□□ -1.06
CDKN3-212ENST00000620759 SSTR3P32745 418 aaPredicted RBP8.43□□□□□ -1.06
CDKN3-212ENST00000620759 TTLL12Q14166 644 aaPredicted RBP8.43□□□□□ -1.06
CDKN3-212ENST00000620759 SYMPKQ92797 1274 aaKnown RBP8.43□□□□□ -1.06
CDKN3-212ENST00000620759 SENP2Q9HC62 589 aa8.43□□□□□ -1.06
CDKN3-212ENST00000620759 MS4A1P11836 297 aa8.42□□□□□ -1.06
CDKN3-212ENST00000620759 ATP13A2Q9NQ11 1180 aa8.42□□□□□ -1.06
CDKN3-212ENST00000620759 SKOR1P84550 965 aa8.41□□□□□ -1.06
CDKN3-212ENST00000620759 CCNYL3P0C7X3 344 aa8.4□□□□□ -1.06
CDKN3-212ENST00000620759 BARGINQ6ZT62 677 aa8.4□□□□□ -1.06
CDKN3-212ENST00000620759 EHBP1Q8NDI1 1231 aa8.4□□□□□ -1.06
CDKN3-212ENST00000620759 KIFC2Q96AC6 838 aa8.4□□□□□ -1.06
CDKN3-212ENST00000620759 WFS1O76024 890 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 ALDH1A1P00352 501 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 AMHR2Q16671 573 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 SPIRE2Q8WWL2 714 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 HPS1Q92902 700 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 PCDHGC3Q9UN70 934 aa8.39□□□□□ -1.07
CDKN3-212ENST00000620759 SPDYE5A6NIY4 337 aa8.38□□□□□ -1.07
CDKN3-212ENST00000620759 ZMYND10O75800 440 aa8.38□□□□□ -1.07
CDKN3-212ENST00000620759 DIXDC1Q155Q3 683 aa8.38□□□□□ -1.07
CDKN3-212ENST00000620759 PTPRNQ16849 979 aa8.38□□□□□ -1.07
CDKN3-212ENST00000620759 TRIM47Q96LD4 638 aa8.38□□□□□ -1.07
CDKN3-212ENST00000620759 WASF2Q9Y6W5 498 aa8.37□□□□□ -1.07
CDKN3-212ENST00000620759 MTMR2Q13614 643 aa8.36□□□□□ -1.07
CDKN3-212ENST00000620759 LCE2AQ5TA79 106 aaPredicted RBP8.36□□□□□ -1.07
CDKN3-212ENST00000620759 PTCRAQ6ISU1 281 aaPredicted RBP8.36□□□□□ -1.07
CDKN3-212ENST00000620759 GIGYF2Q6Y7W6 1299 aaKnown RBP8.36□□□□□ -1.07
CDKN3-212ENST00000620759 MOXD2PA6NHM9 499 aa8.35□□□□□ -1.07
CDKN3-212ENST00000620759 NDUFV2P19404 249 aa8.35□□□□□ -1.07
CDKN3-212ENST00000620759 DESI1Q6ICB0 168 aa8.35□□□□□ -1.07
CDKN3-212ENST00000620759 UNC93B1Q9H1C4 597 aa8.35□□□□□ -1.07
CDKN3-212ENST00000620759 EVA1BQ9NVM1 165 aa8.35□□□□□ -1.07
CDKN3-212ENST00000620759 SIAH2O43255 324 aa8.34□□□□□ -1.07
CDKN3-212ENST00000620759 SNRPBP14678 240 aaKnown RBP8.34□□□□□ -1.07
CDKN3-212ENST00000620759 GJA5P36382 358 aa8.34□□□□□ -1.07
CDKN3-212ENST00000620759 SH3BP2P78314 561 aa8.34□□□□□ -1.07
CDKN3-212ENST00000620759 PRR7Q8TB68 274 aa8.34□□□□□ -1.07
CDKN3-212ENST00000620759 ZC3H15Q8WU90 426 aaKnown RBP8.34□□□□□ -1.07
CDKN3-212ENST00000620759 BEGAINQ9BUH8 593 aa8.34□□□□□ -1.07
CDKN3-212ENST00000620759 KCNH2Q12809 1159 aa8.33□□□□□ -1.08
CDKN3-212ENST00000620759 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
CDKN3-212ENST00000620759 PLEKHG3A1L390 1219 aa8.31□□□□□ -1.08
CDKN3-212ENST00000620759 INSM1Q01101 510 aaPredicted RBP8.31□□□□□ -1.08
CDKN3-212ENST00000620759 TBC1D2Q9BYX2 928 aa8.31□□□□□ -1.08
CDKN3-212ENST00000620759 TERTO14746 1132 aaKnown RBP8.3□□□□□ -1.08
CDKN3-212ENST00000620759 CAPN5O15484 640 aaPredicted RBP8.3□□□□□ -1.08
CDKN3-212ENST00000620759 VARSP26640 1264 aaKnown RBP8.3□□□□□ -1.08
CDKN3-212ENST00000620759 LINC01559Q495D7 138 aa8.3□□□□□ -1.08
CDKN3-212ENST00000620759 BAP1Q92560 729 aa8.3□□□□□ -1.08
CDKN3-212ENST00000620759 WIPF1O43516 503 aa8.29□□□□□ -1.08
CDKN3-212ENST00000620759 RSBN1LQ6PCB5 846 aaPredicted RBP8.29□□□□□ -1.08
CDKN3-212ENST00000620759 ZNF511Q8NB15 262 aa8.29□□□□□ -1.08
CDKN3-212ENST00000620759 CTHP32929 405 aa8.28□□□□□ -1.08
CDKN3-212ENST00000620759 PARP9Q8IXQ6 854 aa8.28□□□□□ -1.08
CDKN3-212ENST00000620759 ZBTB3Q9H5J0 574 aa8.28□□□□□ -1.08
CDKN3-212ENST00000620759 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
CDKN3-212ENST00000620759 MPNDQ8N594 471 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms