RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 RIPK4P57078 832 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 PDE3AQ14432 1141 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 MAPK8IP2Q13387 824 aaPredicted RBP12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 PLCH2O75038 1416 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 FANCAO15360 1455 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 CBX1P83916 185 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 MAP7D2Q96T17 732 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 LNPKQ9C0E8 428 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 CD109Q6YHK3 1445 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 PLEKHH2Q8IVE3 1493 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 SHROOM2Q13796 1616 aa12.19□□□□□ -0.46
TNFAIP3-210ENST00000620204 SSFA2P28290 1259 aa12.18□□□□□ -0.46
TNFAIP3-210ENST00000620204 RLBP1P12271 317 aa12.18□□□□□ -0.46
TNFAIP3-210ENST00000620204 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
TNFAIP3-210ENST00000620204 KIAA1107Q9UPP5 1409 aa12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 IGSF3O75054 1194 aa12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 TSC1Q92574 1164 aa12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 FOXD4L6Q3SYB3 417 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 FOXD4L3Q6VB84 417 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 ADGRL1O94910 1474 aa12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 FAM177BA6PVY3 158 aa12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
TNFAIP3-210ENST00000620204 ISY1Q9ULR0 285 aaKnown RBP12.16□□□□□ -0.46
TNFAIP3-210ENST00000620204 PRDM4Q9UKN5 801 aa12.16□□□□□ -0.46
TNFAIP3-210ENST00000620204 SAMD9LQ8IVG5 1584 aa12.16□□□□□ -0.46
TNFAIP3-210ENST00000620204 EIF3AQ14152 1382 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 PDE4CQ08493 712 aa12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 DISP3Q9P2K9 1392 aa12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 ADCY10Q96PN6 1610 aa12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 BCL11BQ9C0K0 894 aaPredicted RBP12.15□□□□□ -0.46
TNFAIP3-210ENST00000620204 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
TNFAIP3-210ENST00000620204 SMC4Q9NTJ3 1288 aa12.14□□□□□ -0.47
TNFAIP3-210ENST00000620204 KANK1Q14678 1352 aa12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 JARID2Q92833 1246 aaPredicted RBP12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 ESF1Q9H501 851 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 STAG3Q9UJ98 1225 aa12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 CCDC144AA2RUR9 1427 aa12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 PRPF40AO75400 957 aaKnown RBP12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 FGD1P98174 961 aa12.13□□□□□ -0.47
TNFAIP3-210ENST00000620204 ARHGEF12Q9NZN5 1544 aa12.12□□□□□ -0.47
TNFAIP3-210ENST00000620204 RBM27Q9P2N5 1060 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-210ENST00000620204 NKTRP30414 1462 aaKnown RBP12.12□□□□□ -0.47
TNFAIP3-210ENST00000620204 CDC42BPBQ9Y5S2 1711 aa12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 SPDYE4A6NLX3 237 aa12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 CDK11BP21127 795 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 WWC1Q8IX03 1113 aa12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 RARSP54136 660 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 MYO5CQ9NQX4 1742 aa12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 ANKRD45Q5TZF3 282 aa12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 DZIP1LQ8IYY4 767 aaKnown RBP12.11□□□□□ -0.47
TNFAIP3-210ENST00000620204 UHRF1BP1LA0JNW5 1464 aa12.1□□□□□ -0.47
TNFAIP3-210ENST00000620204 PZPP20742 1482 aa12.1□□□□□ -0.47
TNFAIP3-210ENST00000620204 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
TNFAIP3-210ENST00000620204 ZKSCAN2Q63HK3 967 aa12.1□□□□□ -0.47
TNFAIP3-210ENST00000620204 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 APBB1O00213 710 aa12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 PTMSP20962 102 aa12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 CSPP1Q1MSJ5 1256 aa12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 BLMP54132 1417 aaPredicted RBP12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 PRIM1P49642 420 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 NOL8Q76FK4 1167 aaKnown RBP12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 TCP11L2Q8N4U5 519 aa12.09□□□□□ -0.47
TNFAIP3-210ENST00000620204 SYCE3A1L190 88 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 BAG4O95429 457 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 SMAP1Q8IYB5 467 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 TSR2Q969E8 191 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZNF830Q96NB3 372 aaPredicted RBP12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 RBSNQ9H1K0 784 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZMYM4Q5VZL5 1548 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 MTERF4Q7Z6M4 381 aaKnown RBP12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 TESK2Q96S53 571 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 KIAA2012Q0VF49 1180 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 CHAMP1Q96JM3 812 aa12.08□□□□□ -0.48
TNFAIP3-210ENST00000620204 K7ELQ4 463 aaPredicted RBP12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 RAB3GAP1Q15042 981 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 GAS2L2Q8NHY3 880 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 VGLL3A8MV65 326 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 U2AF1L5P0DN76 240 aaPredicted RBP12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 U2AF1Q01081 240 aaKnown RBP eCLIP12.07□□□□□ -0.487e-7■■■■□ 23.3
TNFAIP3-210ENST00000620204 CDCA8Q53HL2 280 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 DYNC1I1O14576 645 aa12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 CD2BP2O95400 341 aaKnown RBP12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZNF771Q7L3S4 317 aaPredicted RBP12.07□□□□□ -0.48
TNFAIP3-210ENST00000620204 U2SURPO15042 1029 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZSCAN23Q3MJ62 389 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 RALGAPBQ86X10 1494 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 MVPQ14764 893 aaKnown RBP12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 SASS6Q6UVJ0 657 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 ZNF521Q96K83 1311 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 PPP1R9BQ96SB3 815 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 CIZ1Q9ULV3 898 aaPredicted RBP12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 ADGRL2O95490 1459 aa12.06□□□□□ -0.48
TNFAIP3-210ENST00000620204 KLHL40Q2TBA0 621 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 PPP4R3BQ5MIZ7 849 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 PLCD3Q8N3E9 789 aa12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 CHMP4BQ9H444 224 aaKnown RBP12.05□□□□□ -0.48
TNFAIP3-210ENST00000620204 C1orf115Q9H7X2 142 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms