RNA–Protein interactions for RNA: ENST00000619831.4

DMD-229, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,734 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-229ENST00000619831 ZKSCAN2Q63HK3 967 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 PLEKHD1A6NEE1 506 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 PDCL2Q8N4E4 241 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 GTF2F1P35269 517 aaKnown RBP eCLIP5.35□□□□□ -1.55
DMD-229ENST00000619831 NOM1Q5C9Z4 860 aaKnown RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 DZIP1LQ8IYY4 767 aaKnown RBP5.35□□□□□ -1.55
DMD-229ENST00000619831 CENPHQ9H3R5 247 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 MTMR7Q9Y216 660 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 TSHZ3Q63HK5 1081 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 SEC24BO95487 1268 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 MAP7D2Q96T17 732 aa5.35□□□□□ -1.55
DMD-229ENST00000619831 TRMT1Q9NXH9 659 aaKnown RBP5.34□□□□□ -1.55
DMD-229ENST00000619831 IGHDP01880 384 aa5.34□□□□□ -1.55
DMD-229ENST00000619831 MNS1Q8NEH6 495 aa5.34□□□□□ -1.55
DMD-229ENST00000619831 SMG6Q86US8 1419 aaKnown RBP5.34□□□□□ -1.55
DMD-229ENST00000619831 MAP3K1Q13233 1512 aa5.34□□□□□ -1.55
DMD-229ENST00000619831 XRCC6P12956 609 aaKnown RBP eCLIP5.34□□□□□ -1.55
DMD-229ENST00000619831 GPS2Q13227 327 aa5.34□□□□□ -1.55
DMD-229ENST00000619831 DNAJC2Q99543 621 aaKnown RBP5.34□□□□□ -1.56
DMD-229ENST00000619831 HTATSF1O43719 755 aaKnown RBP5.34□□□□□ -1.56
DMD-229ENST00000619831 TICAM2Q86XR7 235 aa5.34□□□□□ -1.56
DMD-229ENST00000619831 TPM4P67936 248 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 TRIM34Q9BYJ4 488 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 TBC1D2Q9BYX2 928 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 SMC3Q9UQE7 1217 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 ATP2B1P20020 1258 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 MINK1Q8N4C8 1332 aaPredicted RBP5.33□□□□□ -1.56
DMD-229ENST00000619831 VIRMAQ69YN4 1812 aaKnown RBP5.33□□□□□ -1.56
DMD-229ENST00000619831 NUTM2GQ5VZR2 741 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 SASS6Q6UVJ0 657 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 CDCA8Q53HL2 280 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 RBM42Q9BTD8 480 aaKnown RBP5.33□□□□□ -1.56
DMD-229ENST00000619831 NEK4P51957 841 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 FAM184AQ8NB25 1140 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 TNPO1Q92973 898 aaKnown RBP5.33□□□□□ -1.56
DMD-229ENST00000619831 RIPK4P57078 832 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 NBPF1Q3BBV0 1214 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 GGT6Q6P531 493 aa5.33□□□□□ -1.56
DMD-229ENST00000619831 TEX35Q5T0J7 233 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 ISM2Q6H9L7 571 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 EXOSC9Q06265 439 aaKnown RBP5.32□□□□□ -1.56
DMD-229ENST00000619831 C16orf45Q96MC5 204 aaPredicted RBP5.32□□□□□ -1.56
DMD-229ENST00000619831 USP25Q9UHP3 1055 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 CAGE1Q8TC20 777 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 CHAMP1Q96JM3 812 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 AXDND1Q5T1B0 1012 aaPredicted RBP5.32□□□□□ -1.56
DMD-229ENST00000619831 VPS53Q5VIR6 699 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 FYB1O15117 783 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 SYNJ1O43426 1573 aa5.32□□□□□ -1.56
DMD-229ENST00000619831 FILIP1Q7Z7B0 1213 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 HAP1P54257 671 aaPredicted RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 TPM3P06753 285 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 NAP1L1P55209 391 aaKnown RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 PDE3BQ13370 1112 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 FERMT3Q86UX7 667 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 JARID2Q92833 1246 aaPredicted RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 THUMPD2Q9BTF0 503 aaKnown RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 RABEP2Q9H5N1 569 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 CABP2Q9NPB3 220 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 SPINK5Q9NQ38 1064 aaPredicted RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 TSPYL1Q9H0U9 437 aa5.31□□□□□ -1.56
DMD-229ENST00000619831 K7ELQ4 463 aaPredicted RBP5.31□□□□□ -1.56
DMD-229ENST00000619831 MIS18AQ9NYP9 233 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 TMEM132EQ6IEE7 984 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 ZSCAN30Q86W11 494 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 GGNBP2Q9H3C7 697 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 DIAPH3Q9NSV4 1193 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 CCDC66A2RUB6 948 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 ZSWIM4Q9H7M6 989 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 CKAP2LQ8IYA6 745 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 CDC45O75419 566 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 SYTL4Q96C24 671 aaPredicted RBP5.3□□□□□ -1.56
DMD-229ENST00000619831 CCDC34Q96HJ3 373 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 RNF216Q9NWF9 866 aaPredicted RBP5.3□□□□□ -1.56
DMD-229ENST00000619831 FAM170AA1A519 330 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 RAD21O60216 631 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 DNA2P51530 1060 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 RAB11FIP4Q86YS3 637 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 ARAP1Q96P48 1450 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 H0YHG0 523 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 LIG1P18858 919 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 TAF3Q5VWG9 929 aa5.3□□□□□ -1.56
DMD-229ENST00000619831 PPP2R1AP30153 589 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 PIBF1Q8WXW3 757 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 PDCL3Q9H2J4 239 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 TTC12Q9H892 705 aaPredicted RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 CWC15Q9P013 229 aaKnown RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 SAMD1Q6SPF0 538 aaPredicted RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 DDX11Q96FC9 970 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 AIMP1Q12904 312 aaKnown RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 CGNL1Q0VF96 1302 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 TDRD9Q8NDG6 1382 aaKnown RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 PNISRQ8TF01 805 aaKnown RBP5.29□□□□□ -1.56
DMD-229ENST00000619831 STK31Q9BXU1 1019 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 UACAQ9BZF9 1416 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 HSP90AA4PQ58FG1 418 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 GUCY1B3Q02153 619 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 KIF3AQ9Y496 699 aa5.29□□□□□ -1.56
DMD-229ENST00000619831 ATP2C2O75185 946 aa5.28□□□□□ -1.56
DMD-229ENST00000619831 HDGFL2Q7Z4V5 671 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms