RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	RARS	P54136	660 aa	Known RBP	18.48	■□□□□ 0.55
SMTN-223	ENST00000619644	FTSJ3	Q8IY81	847 aa	Known RBP	18.48	■□□□□ 0.55
SMTN-223	ENST00000619644	POGK	Q9P215	609 aa		18.48	■□□□□ 0.55
SMTN-223	ENST00000619644	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.48	■□□□□ 0.55
SMTN-223	ENST00000619644	UPF2	Q9HAU5	1272 aa	Known RBP	18.47	■□□□□ 0.55
SMTN-223	ENST00000619644	CABP2	Q9NPB3	220 aa		18.47	■□□□□ 0.55
SMTN-223	ENST00000619644	ATP7A	Q04656	1500 aa		18.46	■□□□□ 0.55
SMTN-223	ENST00000619644	PCDHB15	Q9Y5E8	787 aa		18.46	■□□□□ 0.55
SMTN-223	ENST00000619644	TSR2	Q969E8	191 aa	Known RBP	18.46	■□□□□ 0.55
SMTN-223	ENST00000619644	CEP152	O94986	1710 aa		18.45	■□□□□ 0.54
SMTN-223	ENST00000619644	SHROOM2	Q13796	1616 aa		18.45	■□□□□ 0.54
SMTN-223	ENST00000619644	MAPK8IP3	Q9UPT6	1336 aa		18.45	■□□□□ 0.54
SMTN-223	ENST00000619644	BECN1	Q14457	450 aa		18.45	■□□□□ 0.54
SMTN-223	ENST00000619644	NPM1	P06748	294 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
SMTN-223	ENST00000619644	SRPK2	P78362	688 aa	Known RBP	18.44	■□□□□ 0.54
SMTN-223	ENST00000619644	MYOM1	P52179	1685 aa		18.44	■□□□□ 0.54
SMTN-223	ENST00000619644	PMFBP1	Q8TBY8	1022 aa		18.44	■□□□□ 0.54
SMTN-223	ENST00000619644	PDZRN3	Q9UPQ7	1066 aa		18.44	■□□□□ 0.54
SMTN-223	ENST00000619644	RRAGD	Q9NQL2	400 aa	Predicted RBP	18.43	■□□□□ 0.54
SMTN-223	ENST00000619644	POLR3A	O14802	1390 aa	Predicted RBP	18.42	■□□□□ 0.54
SMTN-223	ENST00000619644	USP19	O94966	1318 aa		18.42	■□□□□ 0.54
SMTN-223	ENST00000619644	NGEF	Q8N5V2	710 aa		18.42	■□□□□ 0.54
SMTN-223	ENST00000619644	GGNBP2	Q9H3C7	697 aa		18.42	■□□□□ 0.54
SMTN-223	ENST00000619644	SMC4	Q9NTJ3	1288 aa		18.41	■□□□□ 0.54
SMTN-223	ENST00000619644	TET3	O43151	1660 aa		18.41	■□□□□ 0.54
SMTN-223	ENST00000619644	MYH16	Q9H6N6	1097 aa		18.41	■□□□□ 0.54
SMTN-223	ENST00000619644	ABCA6	Q8N139	1617 aa		18.4	■□□□□ 0.54
SMTN-223	ENST00000619644	RWDD1	Q9H446	243 aa	Predicted RBP	18.4	■□□□□ 0.54
SMTN-223	ENST00000619644	ITPRIP	Q8IWB1	547 aa		18.39	■□□□□ 0.53
SMTN-223	ENST00000619644	MAP3K4	Q9Y6R4	1608 aa		18.39	■□□□□ 0.53
SMTN-223	ENST00000619644	CLASP1	Q7Z460	1538 aa		18.39	■□□□□ 0.53
SMTN-223	ENST00000619644	C14orf93	Q9H972	538 aa	Known RBP	18.39	■□□□□ 0.53
SMTN-223	ENST00000619644	EVC2	Q86UK5	1308 aa		18.38	■□□□□ 0.53
SMTN-223	ENST00000619644	MFAP1	P55081	439 aa	Known RBP	18.37	■□□□□ 0.53
SMTN-223	ENST00000619644	EXOSC9	Q06265	439 aa	Known RBP	18.37	■□□□□ 0.53
SMTN-223	ENST00000619644	L1TD1	Q5T7N2	865 aa	Known RBP	18.37	■□□□□ 0.53
SMTN-223	ENST00000619644	WDR63	Q8IWG1	891 aa		18.37	■□□□□ 0.53
SMTN-223	ENST00000619644	ZKSCAN2	Q63HK3	967 aa		18.36	■□□□□ 0.53
SMTN-223	ENST00000619644	MINK1	Q8N4C8	1332 aa	Predicted RBP	18.36	■□□□□ 0.53
SMTN-223	ENST00000619644	VIRMA	Q69YN4	1812 aa	Known RBP	18.36	■□□□□ 0.53
SMTN-223	ENST00000619644	DZIP1L	Q8IYY4	767 aa	Known RBP	18.36	■□□□□ 0.53
SMTN-223	ENST00000619644	UHRF1BP1L	A0JNW5	1464 aa		18.35	■□□□□ 0.53
SMTN-223	ENST00000619644	KIF1B	O60333	1816 aa		18.35	■□□□□ 0.53
SMTN-223	ENST00000619644	RAPGEF3	O95398	923 aa		18.34	■□□□□ 0.53
SMTN-223	ENST00000619644	MYOM2	P54296	1465 aa		18.33	■□□□□ 0.53
SMTN-223	ENST00000619644	NINL	Q9Y2I6	1382 aa		18.33	■□□□□ 0.52
SMTN-223	ENST00000619644	MVP	Q14764	893 aa	Known RBP	18.33	■□□□□ 0.52
SMTN-223	ENST00000619644	ASXL2	Q76L83	1435 aa		18.32	■□□□□ 0.52
SMTN-223	ENST00000619644	GZF1	Q9H116	711 aa	Predicted RBP	18.32	■□□□□ 0.52
SMTN-223	ENST00000619644	VGF	O15240	615 aa	Predicted RBP	18.32	■□□□□ 0.52
SMTN-223	ENST00000619644	DEPDC5	O75140	1603 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	MROH2A	A6NES4	1674 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	NLRP1	Q9C000	1473 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	FBLN1	P23142	703 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	RIPK4	P57078	832 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	ANTXR1	Q9H6X2	564 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	NPAT	Q14207	1427 aa		18.3	■□□□□ 0.52
SMTN-223	ENST00000619644	SSH1	Q8WYL5	1049 aa		18.29	■□□□□ 0.52
SMTN-223	ENST00000619644	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	18.29	■□□□□ 0.52
SMTN-223	ENST00000619644	TBC1D2	Q9BYX2	928 aa		18.29	■□□□□ 0.52
SMTN-223	ENST00000619644	EFCAB6	Q5THR3	1501 aa		18.29	■□□□□ 0.52
SMTN-223	ENST00000619644	STAG3	Q9UJ98	1225 aa		18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	NOB1	Q9ULX3	412 aa	Known RBP	18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	INO80	Q9ULG1	1556 aa	Predicted RBP	18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	TRIM27	P14373	513 aa		18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	TMPO	P42166	694 aa	Known RBP	18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	SBNO2	Q9Y2G9	1366 aa		18.28	■□□□□ 0.52
SMTN-223	ENST00000619644	PPRC1	Q5VV67	1664 aa	Known RBP	18.27	■□□□□ 0.52
SMTN-223	ENST00000619644	KIAA1210	Q9ULL0	1709 aa		18.27	■□□□□ 0.51
SMTN-223	ENST00000619644	TBC1D32	Q96NH3	1257 aa		18.27	■□□□□ 0.51
SMTN-223	ENST00000619644	ELL2	O00472	640 aa	Predicted RBP	18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	XRCC6	P12956	609 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	IDI1	Q13907	227 aa		18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	NAP1L5	Q96NT1	182 aa	Predicted RBP	18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	PRAM1	Q96QH2	718 aa		18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	VWDE	Q8N2E2	1590 aa		18.26	■□□□□ 0.51
SMTN-223	ENST00000619644	PKNOX2	Q96KN3	472 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	C22orf23	Q9BZE7	217 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	ZNF518A	Q6AHZ1	1483 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	MROH1	Q8NDA8	1641 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	GOLGA6L3	A6NEY3	463 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	TMEM57	Q8N5G2	664 aa		18.25	■□□□□ 0.51
SMTN-223	ENST00000619644	CCDC27	Q2M243	656 aa		18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	GLIPR1L2	Q4G1C9	344 aa		18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	PHF23	Q9BUL5	403 aa	Predicted RBP	18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	LNPK	Q9C0E8	428 aa		18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	ANKRD36B	Q8N2N9	1353 aa		18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	PNN	Q9H307	717 aa	Known RBP	18.24	■□□□□ 0.51
SMTN-223	ENST00000619644	ATF7IP	Q6VMQ6	1270 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	ARAP3	Q8WWN8	1544 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	TERF2IP	Q9NYB0	399 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	DDX19B	Q9UMR2	479 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	QRICH2	Q9H0J4	1663 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	DIAPH1	O60610	1272 aa	Known RBP	18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	PANK2	Q9BZ23	570 aa		18.23	■□□□□ 0.51
SMTN-223	ENST00000619644	CD109	Q6YHK3	1445 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644		A0A1W2PP64	1363 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644	HMOX1	P09601	288 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644	ABCA9	Q8IUA7	1624 aa		18.22	■□□□□ 0.51
SMTN-223	ENST00000619644	AAMP	Q13685	434 aa		18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms