RNA–Protein interactions for RNA: ENST00000617198.4

DDX1-207, Transcript of DEAD-box helicase 1, humanhuman

TSL 1 (best) BASIC

Gene DDX1, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-207ENST00000617198 KIDINS220Q9ULH0 1771 aa22.52■■□□□ 1.19
DDX1-207ENST00000617198 QRICH2Q9H0J4 1663 aa22.51■■□□□ 1.19
DDX1-207ENST00000617198 IQSEC2Q5JU85 1478 aa22.51■■□□□ 1.19
DDX1-207ENST00000617198 TRAK1Q9UPV9 953 aa22.5■■□□□ 1.19
DDX1-207ENST00000617198 AAMPQ13685 434 aa22.49■■□□□ 1.19
DDX1-207ENST00000617198 SLC12A5Q9H2X9 1139 aa22.49■■□□□ 1.19
DDX1-207ENST00000617198 USP19O94966 1318 aa22.49■■□□□ 1.19
DDX1-207ENST00000617198 RARSP54136 660 aaKnown RBP22.48■■□□□ 1.19
DDX1-207ENST00000617198 NEUROD2Q15784 382 aa22.48■■□□□ 1.19
DDX1-207ENST00000617198 FRAT1Q92837 279 aaPredicted RBP22.48■■□□□ 1.19
DDX1-207ENST00000617198 PHF23Q9BUL5 403 aaPredicted RBP22.48■■□□□ 1.19
DDX1-207ENST00000617198 TCP11L2Q8N4U5 519 aa22.48■■□□□ 1.19
DDX1-207ENST00000617198 USP32Q8NFA0 1604 aa22.48■■□□□ 1.19
DDX1-207ENST00000617198 PPLO60437 1756 aa22.48■■□□□ 1.19
DDX1-207ENST00000617198 CHGAP10645 457 aaKnown RBP22.47■■□□□ 1.19
DDX1-207ENST00000617198 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
DDX1-207ENST00000617198 WDR63Q8IWG1 891 aa22.47■■□□□ 1.19
DDX1-207ENST00000617198 C14orf93Q9H972 538 aaKnown RBP22.47■■□□□ 1.19
DDX1-207ENST00000617198 RRP7AQ9Y3A4 280 aaKnown RBP22.47■■□□□ 1.19
DDX1-207ENST00000617198 ADGRB1O14514 1584 aa22.46■■□□□ 1.19
DDX1-207ENST00000617198 PMFBP1Q8TBY8 1022 aa22.46■■□□□ 1.19
DDX1-207ENST00000617198 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.18
DDX1-207ENST00000617198 ZNF518AQ6AHZ1 1483 aa22.44■■□□□ 1.18
DDX1-207ENST00000617198 CCDC27Q2M243 656 aa22.44■■□□□ 1.18
DDX1-207ENST00000617198 CFAP53Q96M91 514 aa22.43■■□□□ 1.18
DDX1-207ENST00000617198 NPATQ14207 1427 aa22.42■■□□□ 1.18
DDX1-207ENST00000617198 SEC24BO95487 1268 aa22.42■■□□□ 1.18
DDX1-207ENST00000617198 MTHFSP49914 203 aa22.42■■□□□ 1.18
DDX1-207ENST00000617198 ASXL2Q76L83 1435 aa22.41■■□□□ 1.18
DDX1-207ENST00000617198 RTN4Q9NQC3 1192 aaKnown RBP22.41■■□□□ 1.18
DDX1-207ENST00000617198 ZMYM3Q14202 1370 aa22.41■■□□□ 1.18
DDX1-207ENST00000617198 RLBP1P12271 317 aa22.4■■□□□ 1.18
DDX1-207ENST00000617198 NCBP3Q53F19 620 aaKnown RBP22.4■■□□□ 1.18
DDX1-207ENST00000617198 RPGRIP1LQ68CZ1 1315 aa22.4■■□□□ 1.18
DDX1-207ENST00000617198 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
DDX1-207ENST00000617198 PCDHB15Q9Y5E8 787 aa22.4■■□□□ 1.18
DDX1-207ENST00000617198 NLRP1Q9C000 1473 aa22.39■■□□□ 1.18
DDX1-207ENST00000617198 BECN1Q14457 450 aa22.39■■□□□ 1.17
DDX1-207ENST00000617198 PUS7Q96PZ0 661 aaKnown RBP22.38■■□□□ 1.17
DDX1-207ENST00000617198 MYH16Q9H6N6 1097 aa22.38■■□□□ 1.17
DDX1-207ENST00000617198 BRPF3Q9ULD4 1205 aa22.38■■□□□ 1.17
DDX1-207ENST00000617198 CFAP65Q6ZU64 1925 aaKnown RBP22.38■■□□□ 1.17
DDX1-207ENST00000617198 TNNQ9UQP3 1299 aa22.37■■□□□ 1.17
DDX1-207ENST00000617198 BCL2L13Q9BXK5 485 aa22.37■■□□□ 1.17
DDX1-207ENST00000617198 NSD2O96028 1365 aa22.37■■□□□ 1.17
DDX1-207ENST00000617198 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
DDX1-207ENST00000617198 GLI2P10070 1586 aa22.35■■□□□ 1.17
DDX1-207ENST00000617198 EVC2Q86UK5 1308 aa22.35■■□□□ 1.17
DDX1-207ENST00000617198 RWDD1Q9H446 243 aaPredicted RBP22.34■■□□□ 1.17
DDX1-207ENST00000617198 FRMPD1Q5SYB0 1578 aa22.34■■□□□ 1.17
DDX1-207ENST00000617198 PDZRN3Q9UPQ7 1066 aa22.34■■□□□ 1.17
DDX1-207ENST00000617198 GGT6Q6P531 493 aa22.33■■□□□ 1.17
DDX1-207ENST00000617198 UPF2Q9HAU5 1272 aaKnown RBP22.33■■□□□ 1.17
DDX1-207ENST00000617198 ADGRB2O60241 1585 aa22.33■■□□□ 1.17
DDX1-207ENST00000617198 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.17
DDX1-207ENST00000617198 TULP4Q9NRJ4 1543 aa22.32■■□□□ 1.16
DDX1-207ENST00000617198 U2AF1L5P0DN76 240 aaPredicted RBP22.32■■□□□ 1.16
DDX1-207ENST00000617198 U2AF1Q01081 240 aaKnown RBP eCLIP22.32■■□□□ 1.16
DDX1-207ENST00000617198 ARHGEF28Q8N1W1 1705 aaKnown RBP22.32■■□□□ 1.16
DDX1-207ENST00000617198 MLH3Q9UHC1 1453 aa22.31■■□□□ 1.16
DDX1-207ENST00000617198 MVPQ14764 893 aaKnown RBP22.31■■□□□ 1.16
DDX1-207ENST00000617198 POGZQ7Z3K3 1410 aa22.3■■□□□ 1.16
DDX1-207ENST00000617198 TBC1D32Q96NH3 1257 aa22.3■■□□□ 1.16
DDX1-207ENST00000617198 ABCC3O15438 1527 aa22.3■■□□□ 1.16
DDX1-207ENST00000617198 CFAP74Q9C0B2 1584 aa22.29■■□□□ 1.16
DDX1-207ENST00000617198 CT47B1P0C2W7 299 aaPredicted RBP22.29■■□□□ 1.16
DDX1-207ENST00000617198 ZKSCAN2Q63HK3 967 aa22.29■■□□□ 1.16
DDX1-207ENST00000617198 CAMSAP1Q5T5Y3 1602 aa22.28■■□□□ 1.16
DDX1-207ENST00000617198 VGFO15240 615 aaPredicted RBP22.27■■□□□ 1.16
DDX1-207ENST00000617198 FTSJ3Q8IY81 847 aaKnown RBP22.27■■□□□ 1.16
DDX1-207ENST00000617198 DZIP1LQ8IYY4 767 aaKnown RBP22.27■■□□□ 1.16
DDX1-207ENST00000617198 SLKQ9H2G2 1235 aaPredicted RBP22.26■■□□□ 1.15
DDX1-207ENST00000617198 NEXMIFQ5QGS0 1516 aa22.26■■□□□ 1.15
DDX1-207ENST00000617198 PIK3C2BO00750 1634 aa22.25■■□□□ 1.15
DDX1-207ENST00000617198 CABP2Q9NPB3 220 aa22.25■■□□□ 1.15
DDX1-207ENST00000617198 ANTXR1Q9H6X2 564 aa22.24■■□□□ 1.15
DDX1-207ENST00000617198 SIGLEC1Q9BZZ2 1709 aa22.24■■□□□ 1.15
DDX1-207ENST00000617198 ANO8Q9HCE9 1232 aaPredicted RBP22.23■■□□□ 1.15
DDX1-207ENST00000617198 ABCC11Q96J66 1382 aa22.23■■□□□ 1.15
DDX1-207ENST00000617198 NUTM2DQ5VT03 806 aaPredicted RBP22.23■■□□□ 1.15
DDX1-207ENST00000617198 TSR2Q969E8 191 aaKnown RBP22.23■■□□□ 1.15
DDX1-207ENST00000617198 CD109Q6YHK3 1445 aa22.22■■□□□ 1.15
DDX1-207ENST00000617198 PLEKHF1Q96S99 279 aa22.22■■□□□ 1.15
DDX1-207ENST00000617198 TBC1D2Q9BYX2 928 aa22.22■■□□□ 1.15
DDX1-207ENST00000617198 SMC4Q9NTJ3 1288 aa22.22■■□□□ 1.15
DDX1-207ENST00000617198 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
DDX1-207ENST00000617198 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.15
DDX1-207ENST00000617198 EXOSC9Q06265 439 aaKnown RBP22.2■■□□□ 1.15
DDX1-207ENST00000617198 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
DDX1-207ENST00000617198 POGKQ9P215 609 aa22.19■■□□□ 1.14
DDX1-207ENST00000617198 NPM1P06748 294 aaKnown RBP eCLIP22.19■■□□□ 1.14
DDX1-207ENST00000617198 TRIM27P14373 513 aa22.19■■□□□ 1.14
DDX1-207ENST00000617198 HDAC1Q13547 482 aaPredicted RBP22.19■■□□□ 1.14
DDX1-207ENST00000617198 COL3A1P02461 1466 aaPredicted RBP22.19■■□□□ 1.14
DDX1-207ENST00000617198 TRIM35Q9UPQ4 493 aa22.18■■□□□ 1.14
DDX1-207ENST00000617198 SAFB2Q14151 953 aaKnown RBP eCLIP22.18■■□□□ 1.14
DDX1-207ENST00000617198 DDX19BQ9UMR2 479 aa22.18■■□□□ 1.14
DDX1-207ENST00000617198 SSH1Q8WYL5 1049 aa22.17■■□□□ 1.14
DDX1-207ENST00000617198 IL16Q14005 1332 aa22.16■■□□□ 1.14
DDX1-207ENST00000617198 SRPK2P78362 688 aaKnown RBP22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms