RNA–Protein interactions for RNA: ENST00000616704.4

ELK4-204, Transcript of ELK4, ETS transcription factor, human

TSL 2

Gene ELK4, Length 2,535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELK4-204	ENST00000616704	SCAF11	Q99590	1463 aa	Known RBP	32.59	■■■□□ 2.81
ELK4-204	ENST00000616704	ZC3H13	Q5T200	1668 aa	Known RBP	32.55	■■■□□ 2.8
ELK4-204	ENST00000616704	EIF3A	Q14152	1382 aa	Known RBP	32.55	■■■□□ 2.8
ELK4-204	ENST00000616704	APAF1	O14727	1248 aa		32.55	■■■□□ 2.8
ELK4-204	ENST00000616704	NKTR	P30414	1462 aa	Known RBP	32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	BCAR3	O75815	825 aa		32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	IDI1	Q13907	227 aa		32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	MLEC	Q14165	292 aa		32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	KIAA1210	Q9ULL0	1709 aa		32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	SENP3	Q9H4L4	574 aa	Predicted RBP	32.54	■■■□□ 2.8
ELK4-204	ENST00000616704	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.53	■■■□□ 2.8
ELK4-204	ENST00000616704	PPL	O60437	1756 aa		32.53	■■■□□ 2.8
ELK4-204	ENST00000616704	ARHGAP31	Q2M1Z3	1444 aa		32.52	■■■□□ 2.8
ELK4-204	ENST00000616704	NPC1L1	Q9UHC9	1359 aa		32.51	■■■□□ 2.8
ELK4-204	ENST00000616704	NRXN1	Q9ULB1	1477 aa		32.51	■■■□□ 2.8
ELK4-204	ENST00000616704	PIK3C2B	O00750	1634 aa		32.51	■■■□□ 2.8
ELK4-204	ENST00000616704	FRAT2	O75474	233 aa	Predicted RBP	32.5	■■■□□ 2.79
ELK4-204	ENST00000616704		E9PSI1	815 aa		32.46	■■■□□ 2.79
ELK4-204	ENST00000616704	MYOM1	P52179	1685 aa		32.46	■■■□□ 2.79
ELK4-204	ENST00000616704	IGHD	P01880	384 aa		32.45	■■■□□ 2.79
ELK4-204	ENST00000616704	TMEM132E	Q6IEE7	984 aa		32.45	■■■□□ 2.79
ELK4-204	ENST00000616704	PREX1	Q8TCU6	1659 aa		32.45	■■■□□ 2.79
ELK4-204	ENST00000616704	DMRT2	Q9Y5R5	561 aa		32.44	■■■□□ 2.78
ELK4-204	ENST00000616704	MYO5B	Q9ULV0	1848 aa		32.42	■■■□□ 2.78
ELK4-204	ENST00000616704	TRAK1	Q9UPV9	953 aa		32.41	■■■□□ 2.78
ELK4-204	ENST00000616704	C14orf93	Q9H972	538 aa	Known RBP	32.4	■■■□□ 2.78
ELK4-204	ENST00000616704	RPGRIP1L	Q68CZ1	1315 aa		32.4	■■■□□ 2.78
ELK4-204	ENST00000616704	PRKCSH	P14314	528 aa	Predicted RBP	32.4	■■■□□ 2.78
ELK4-204	ENST00000616704	RERE	Q9P2R6	1566 aa		32.4	■■■□□ 2.78
ELK4-204	ENST00000616704	USP19	O94966	1318 aa		32.39	■■■□□ 2.78
ELK4-204	ENST00000616704	SLC52A1	Q9NWF4	448 aa		32.39	■■■□□ 2.78
ELK4-204	ENST00000616704	CLTC	Q00610	1675 aa	Known RBP	32.39	■■■□□ 2.78
ELK4-204	ENST00000616704	AGL	P35573	1532 aa		32.38	■■■□□ 2.77
ELK4-204	ENST00000616704	NEXMIF	Q5QGS0	1516 aa		32.38	■■■□□ 2.77
ELK4-204	ENST00000616704	CGNL1	Q0VF96	1302 aa		32.38	■■■□□ 2.77
ELK4-204	ENST00000616704	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	32.37	■■■□□ 2.77
ELK4-204	ENST00000616704	PDE3A	Q14432	1141 aa		32.36	■■■□□ 2.77
ELK4-204	ENST00000616704	ARHGEF40	Q8TER5	1519 aa		32.35	■■■□□ 2.77
ELK4-204	ENST00000616704	CLUAP1	Q96AJ1	413 aa		32.34	■■■□□ 2.77
ELK4-204	ENST00000616704	KDM5A	P29375	1690 aa	Known RBP	32.33	■■■□□ 2.77
ELK4-204	ENST00000616704	VGF	O15240	615 aa	Predicted RBP	32.33	■■■□□ 2.77
ELK4-204	ENST00000616704	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.33	■■■□□ 2.77
ELK4-204	ENST00000616704	PANK1	Q8TE04	598 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	COG6	Q9Y2V7	657 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	ERVK-7	P63135	1459 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	ADGRB1	O14514	1584 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	SEC24B	O95487	1268 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	NGEF	Q8N5V2	710 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	CARD14	Q9BXL6	1004 aa		32.32	■■■□□ 2.76
ELK4-204	ENST00000616704	CANX	P27824	592 aa	Known RBP	32.31	■■■□□ 2.76
ELK4-204	ENST00000616704	TMEM131L	A2VDJ0	1609 aa		32.31	■■■□□ 2.76
ELK4-204	ENST00000616704	SETBP1	Q9Y6X0	1596 aa		32.31	■■■□□ 2.76
ELK4-204	ENST00000616704	MAPK8IP3	Q9UPT6	1336 aa		32.3	■■■□□ 2.76
ELK4-204	ENST00000616704	NINL	Q9Y2I6	1382 aa		32.28	■■■□□ 2.76
ELK4-204	ENST00000616704	WWC1	Q8IX03	1113 aa		32.28	■■■□□ 2.76
ELK4-204	ENST00000616704	VIRMA	Q69YN4	1812 aa	Known RBP	32.28	■■■□□ 2.76
ELK4-204	ENST00000616704	STAG3	Q9UJ98	1225 aa		32.26	■■■□□ 2.75
ELK4-204	ENST00000616704	PPP6R1	Q9UPN7	881 aa		32.25	■■■□□ 2.75
ELK4-204	ENST00000616704	MYO3A	Q8NEV4	1616 aa		32.22	■■■□□ 2.75
ELK4-204	ENST00000616704	BECN1	Q14457	450 aa		32.21	■■■□□ 2.75
ELK4-204	ENST00000616704	SLC24A1	O60721	1099 aa		32.21	■■■□□ 2.75
ELK4-204	ENST00000616704	POLR3A	O14802	1390 aa	Predicted RBP	32.2	■■■□□ 2.75
ELK4-204	ENST00000616704	NLRP1	Q9C000	1473 aa		32.2	■■■□□ 2.74
ELK4-204	ENST00000616704	ESF1	Q9H501	851 aa	Known RBP	32.19	■■■□□ 2.74
ELK4-204	ENST00000616704	STK26	Q9P289	416 aa		32.19	■■■□□ 2.74
ELK4-204	ENST00000616704	QRICH2	Q9H0J4	1663 aa		32.18	■■■□□ 2.74
ELK4-204	ENST00000616704	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.18	■■■□□ 2.74
ELK4-204	ENST00000616704	SLK	Q9H2G2	1235 aa	Predicted RBP	32.18	■■■□□ 2.74
ELK4-204	ENST00000616704	NEUROD2	Q15784	382 aa		32.17	■■■□□ 2.74
ELK4-204	ENST00000616704	POGK	Q9P215	609 aa		32.17	■■■□□ 2.74
ELK4-204	ENST00000616704	RARS	P54136	660 aa	Known RBP	32.15	■■■□□ 2.74
ELK4-204	ENST00000616704	RRP7A	Q9Y3A4	280 aa	Known RBP	32.15	■■■□□ 2.74
ELK4-204	ENST00000616704	ZMYM3	Q14202	1370 aa		32.15	■■■□□ 2.74
ELK4-204	ENST00000616704	SBNO2	Q9Y2G9	1366 aa		32.14	■■■□□ 2.74
ELK4-204	ENST00000616704	SPATA31D1	Q6ZQQ2	1576 aa		32.14	■■■□□ 2.74
ELK4-204	ENST00000616704	ZFYVE9	O95405	1425 aa		32.14	■■■□□ 2.74
ELK4-204	ENST00000616704	TRH	P20396	242 aa	Predicted RBP	32.14	■■■□□ 2.73
ELK4-204	ENST00000616704	PMFBP1	Q8TBY8	1022 aa		32.14	■■■□□ 2.73
ELK4-204	ENST00000616704	PCDHB15	Q9Y5E8	787 aa		32.13	■■■□□ 2.73
ELK4-204	ENST00000616704	TNN	Q9UQP3	1299 aa		32.11	■■■□□ 2.73
ELK4-204	ENST00000616704	RLBP1	P12271	317 aa		32.11	■■■□□ 2.73
ELK4-204	ENST00000616704	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.11	■■■□□ 2.73
ELK4-204	ENST00000616704	TNNT2	P45379	298 aa	Predicted RBP	32.09	■■■□□ 2.73
ELK4-204	ENST00000616704	RUNDC1	Q96C34	613 aa		32.09	■■■□□ 2.73
ELK4-204	ENST00000616704	A2ML1	A8K2U0	1454 aa		32.09	■■■□□ 2.73
ELK4-204	ENST00000616704	MORC1	Q86VD1	984 aa		32.08	■■■□□ 2.73
ELK4-204	ENST00000616704	FAM43A	Q8N2R8	423 aa		32.08	■■■□□ 2.73
ELK4-204	ENST00000616704	TCP11L2	Q8N4U5	519 aa		32.08	■■■□□ 2.73
ELK4-204	ENST00000616704	ANTXR1	Q9H6X2	564 aa		32.08	■■■□□ 2.73
ELK4-204	ENST00000616704	UPF2	Q9HAU5	1272 aa	Known RBP	32.07	■■■□□ 2.73
ELK4-204	ENST00000616704	AAMP	Q13685	434 aa		32.07	■■■□□ 2.72
ELK4-204	ENST00000616704	BCL2L13	Q9BXK5	485 aa		32.07	■■■□□ 2.72
ELK4-204	ENST00000616704	PDZRN3	Q9UPQ7	1066 aa		32.07	■■■□□ 2.72
ELK4-204	ENST00000616704	TBC1D32	Q96NH3	1257 aa		32.06	■■■□□ 2.72
ELK4-204	ENST00000616704	SLC12A5	Q9H2X9	1139 aa		32.06	■■■□□ 2.72
ELK4-204	ENST00000616704	NSD3	Q9BZ95	1437 aa		32.06	■■■□□ 2.72
ELK4-204	ENST00000616704	SHPRH	Q149N8	1683 aa		32.05	■■■□□ 2.72
ELK4-204	ENST00000616704	PHF23	Q9BUL5	403 aa	Predicted RBP	32.04	■■■□□ 2.72
ELK4-204	ENST00000616704	IQSEC2	Q5JU85	1478 aa		32.04	■■■□□ 2.72
ELK4-204	ENST00000616704	WDR63	Q8IWG1	891 aa		32.02	■■■□□ 2.72

Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms