RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 LTV1Q96GA3 475 aaPredicted RBP7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 DMRT2Q9Y5R5 561 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 HMMRO75330 724 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 MVPQ14764 893 aaKnown RBP7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 RAPGEF6Q8TEU7 1601 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 FANCAO15360 1455 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 FCHSD2O94868 740 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 CDK19Q9BWU1 502 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 WAPLQ7Z5K2 1190 aa7.05□□□□□ -1.28
SYNCRIP-204ENST00000616122 SLC26A8Q96RN1 970 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 C22orf23Q9BZE7 217 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 FAM135AQ9P2D6 1515 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 CASC1Q6TDU7 716 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 NOS1P29475 1434 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 A2MP01023 1474 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 FYB1O15117 783 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 TRIM44Q96DX7 344 aaPredicted RBP7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 PCDHB15Q9Y5E8 787 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 PLA2R1Q13018 1463 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 TRHP20396 242 aaPredicted RBP7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 ZNF428Q96B54 188 aa7.04□□□□□ -1.28
SYNCRIP-204ENST00000616122 ABCC10Q5T3U5 1492 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 SYCP2Q9BX26 1530 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 KIF14Q15058 1648 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 FBLN1P23142 703 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 NPC1L1Q9UHC9 1359 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 TWISTNBQ3B726 338 aaPredicted RBP7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 IGHDP01880 384 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 SULT6B1Q6IMI4 303 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 CFAP44Q96MT7 982 aa7.03□□□□□ -1.28
SYNCRIP-204ENST00000616122 TARBP1Q13395 1621 aaKnown RBP7.02□□□□□ -1.28
SYNCRIP-204ENST00000616122 NLRP6P59044 892 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 CHMP5Q9NZZ3 219 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 EMILIN1Q9Y6C2 1016 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 RLBP1P12271 317 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 TRIM27P14373 513 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 GBP4Q96PP9 640 aa7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 POLR3AO14802 1390 aaPredicted RBP7.02□□□□□ -1.29
SYNCRIP-204ENST00000616122 COL17A1Q9UMD9 1497 aaPredicted RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 TMEM57Q8N5G2 664 aa7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 PUS7Q96PZ0 661 aaKnown RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 CHMP4AQ9BY43 222 aa7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 NOB1Q9ULX3 412 aaKnown RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 OS9Q13438 667 aaPredicted RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 L1TD1Q5T7N2 865 aaKnown RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 FOXD4L1Q9NU39 408 aa7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 KDM5BQ9UGL1 1544 aa7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 DNMT1P26358 1616 aaKnown RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 RRS1Q15050 365 aaKnown RBP7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 TNNQ9UQP3 1299 aa7.01□□□□□ -1.29
SYNCRIP-204ENST00000616122 NKTRP30414 1462 aaKnown RBP7□□□□□ -1.29
SYNCRIP-204ENST00000616122 FKBP5Q13451 457 aaPredicted RBP7□□□□□ -1.29
SYNCRIP-204ENST00000616122 NME9Q86XW9 330 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 ZNF692Q9BU19 519 aaPredicted RBP7□□□□□ -1.29
SYNCRIP-204ENST00000616122 KDM6BO15054 1643 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
SYNCRIP-204ENST00000616122 NINLQ9Y2I6 1382 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 NFE2L2Q16236 605 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 PIK3C2GO75747 1445 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 C1orf115Q9H7X2 142 aa7□□□□□ -1.29
SYNCRIP-204ENST00000616122 RTEL1-TNFRSF6BF6WH68 1400 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 ZNF521Q96K83 1311 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 CCDC27Q2M243 656 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 TEFQ10587 303 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 ASXL2Q76L83 1435 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 GOLGA6L3A6NEY3 463 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 KCNJ4P48050 445 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 SBNO2Q9Y2G9 1366 aa6.99□□□□□ -1.29
SYNCRIP-204ENST00000616122 DCTN1Q14203 1278 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 ABCC11Q96J66 1382 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 C8orf34Q49A92 452 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 TSPYL4Q9UJ04 414 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 DUOX2Q9NRD8 1548 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 INSRP06213 1382 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 TRIM6-TRIM34B2RNG4 842 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 REC8O95072 547 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 NECTIN2Q92692 538 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 POLKQ9UBT6 870 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 EIF4G3O43432 1585 aaKnown RBP6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 NUTM2GQ5VZR2 741 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 BRPF3Q9ULD4 1205 aa6.98□□□□□ -1.29
SYNCRIP-204ENST00000616122 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 SLC4A2P04920 1241 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 GCC1Q96CN9 775 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 DDX49Q9Y6V7 483 aaKnown RBP6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 ANKRD36BQ8N2N9 1353 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 DCAF8L1A6NGE4 600 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 MCCP23508 829 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 CTTNBP2Q8WZ74 1663 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 IL27Q8NEV9 243 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 ST18O60284 1047 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 TPRNQ4KMQ1 711 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 KIAA1211Q6ZU35 1233 aa6.97□□□□□ -1.29
SYNCRIP-204ENST00000616122 PHACTR3Q96KR7 559 aa6.96□□□□□ -1.29
SYNCRIP-204ENST00000616122 HDAC5Q9UQL6 1122 aa6.96□□□□□ -1.29
SYNCRIP-204ENST00000616122 EIF2S2P20042 333 aaKnown RBP6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 CHD1LQ86WJ1 897 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 TBC1D2Q9BYX2 928 aa6.96□□□□□ -1.3
SYNCRIP-204ENST00000616122 ANO2Q9NQ90 1003 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms