RNA–Protein interactions for RNA: ENST00000615301.4

SHTN1-207, Transcript of shootin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHTN1, Length 6,730 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-207ENST00000615301 SMC2O95347 1197 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 CCDC47Q96A33 483 aaKnown RBP11.89□□□□□ -0.51
SHTN1-207ENST00000615301 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 ZNF428Q96B54 188 aa11.89□□□□□ -0.51
SHTN1-207ENST00000615301 CARMIL2Q6F5E8 1435 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 CAGE1Q8TC20 777 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 HOOK1Q9UJC3 728 aaKnown RBP11.88□□□□□ -0.51
SHTN1-207ENST00000615301 PDZRN3Q9UPQ7 1066 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 FYB1O15117 783 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 NOM1Q5C9Z4 860 aaKnown RBP11.88□□□□□ -0.51
SHTN1-207ENST00000615301 GGNBP2Q9H3C7 697 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 TSPYL4Q9UJ04 414 aa11.88□□□□□ -0.51
SHTN1-207ENST00000615301 WASHC4Q2M389 1173 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 TSPY26PQ9H489 355 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 TCEAL9Q9UHQ7 104 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 RAPGEF2Q9Y4G8 1499 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 CCDC7Q96M83 1385 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 STK11IPQ8N1F8 1099 aa11.87□□□□□ -0.51
SHTN1-207ENST00000615301 BRPF1P55201 1214 aaPredicted RBP11.87□□□□□ -0.51
SHTN1-207ENST00000615301 MAP7D2Q96T17 732 aa11.86□□□□□ -0.51
SHTN1-207ENST00000615301 ACBD3Q9H3P7 528 aa11.86□□□□□ -0.51
SHTN1-207ENST00000615301 BAZ1AQ9NRL2 1556 aaPredicted RBP11.86□□□□□ -0.51
SHTN1-207ENST00000615301 SYTL4Q96C24 671 aaPredicted RBP11.86□□□□□ -0.51
SHTN1-207ENST00000615301 LRRFIP1Q32MZ4 808 aaKnown RBP11.86□□□□□ -0.51
SHTN1-207ENST00000615301 OLFM4Q6UX06 510 aa11.85□□□□□ -0.51
SHTN1-207ENST00000615301 VPS37DQ86XT2 251 aa11.85□□□□□ -0.51
SHTN1-207ENST00000615301 RALYLQ86SE5 291 aaKnown RBP11.85□□□□□ -0.51
SHTN1-207ENST00000615301 SAFBQ15424 915 aaKnown RBP eCLIP11.85□□□□□ -0.51
SHTN1-207ENST00000615301 PLCD4Q9BRC7 762 aa11.85□□□□□ -0.51
SHTN1-207ENST00000615301 CCDC18Q5T9S5 1454 aa11.85□□□□□ -0.51
SHTN1-207ENST00000615301 ERICH2A1L162 156 aa11.85□□□□□ -0.51
SHTN1-207ENST00000615301 CT47A1Q5JQC4 288 aaPredicted RBP11.84□□□□□ -0.51
SHTN1-207ENST00000615301 BCAR3O75815 825 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 AKNAQ7Z591 1439 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 WASHC2AQ641Q2 1341 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 ERC2O15083 957 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 FSD1Q9BTV5 496 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 TSPYL1Q9H0U9 437 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 MSH5O43196 834 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 OFD1O75665 1012 aa11.84□□□□□ -0.51
SHTN1-207ENST00000615301 FAM177A1Q8N128 213 aaPredicted RBP11.84□□□□□ -0.51
SHTN1-207ENST00000615301 NAT10Q9H0A0 1025 aaKnown RBP11.84□□□□□ -0.51
SHTN1-207ENST00000615301 CCDC173Q0VFZ6 552 aa11.83□□□□□ -0.51
SHTN1-207ENST00000615301 AXDND1Q5T1B0 1012 aaPredicted RBP11.83□□□□□ -0.51
SHTN1-207ENST00000615301 ZFYVE27Q5T4F4 411 aa11.83□□□□□ -0.52
SHTN1-207ENST00000615301 GNAI1P63096 354 aa11.83□□□□□ -0.52
SHTN1-207ENST00000615301 NUTM2GQ5VZR2 741 aa11.83□□□□□ -0.52
SHTN1-207ENST00000615301 NOL10Q9BSC4 688 aaKnown RBP11.83□□□□□ -0.52
SHTN1-207ENST00000615301 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.83□□□□□ -0.52
SHTN1-207ENST00000615301 UBTFL1P0CB47 393 aaPredicted RBP11.83□□□□□ -0.52
SHTN1-207ENST00000615301 AMOTL1Q8IY63 956 aa11.83□□□□□ -0.52
SHTN1-207ENST00000615301 CDR1P51861 262 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 MTERF4Q7Z6M4 381 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 GRPEL1Q9HAV7 217 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 UQCRHLA0A096LP55 91 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 SURF6O75683 361 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 UQCRHP07919 91 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 STK3Q13188 491 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 TCP11L2Q8N4U5 519 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 ROCK1Q13464 1354 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 CCDC66A2RUB6 948 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 DNAJC2Q99543 621 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 TRIM34Q9BYJ4 488 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 DDX58O95786 925 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 MBD3O95983 291 aa11.82□□□□□ -0.52
SHTN1-207ENST00000615301 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
SHTN1-207ENST00000615301 HSP90AB3PQ58FF7 597 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 VGFO15240 615 aaPredicted RBP11.81□□□□□ -0.52
SHTN1-207ENST00000615301 EVA1CP58658 441 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 RIC3Q7Z5B4 369 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 SKAP1Q86WV1 359 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 CWC15Q9P013 229 aaKnown RBP11.81□□□□□ -0.52
SHTN1-207ENST00000615301 BACH2Q9BYV9 841 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 CNTLNQ9NXG0 1405 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 RUSC2Q8N2Y8 1516 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 CABP2Q9NPB3 220 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 MROH2BQ7Z745 1585 aa11.81□□□□□ -0.52
SHTN1-207ENST00000615301 MAP4K4O95819 1239 aaPredicted RBP11.8□□□□□ -0.52
SHTN1-207ENST00000615301 MTHFSP49914 203 aa11.8□□□□□ -0.52
SHTN1-207ENST00000615301 HSP90AB2PQ58FF8 381 aa11.8□□□□□ -0.52
SHTN1-207ENST00000615301 ERICH4A6NGS2 130 aa11.8□□□□□ -0.52
SHTN1-207ENST00000615301 CCDC43Q96MW1 224 aaKnown RBP11.8□□□□□ -0.52
SHTN1-207ENST00000615301 CTDP1Q9Y5B0 961 aaPredicted RBP11.8□□□□□ -0.52
SHTN1-207ENST00000615301 RDXP35241 583 aaKnown RBP11.79□□□□□ -0.52
SHTN1-207ENST00000615301 PRDM10Q9NQV6 1147 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 EPS15P42566 896 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 HSP90AB4PQ58FF6 505 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 CCDC191Q8NCU4 936 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 HMGN5P82970 282 aaKnown RBP11.79□□□□□ -0.52
SHTN1-207ENST00000615301 TMEM132EQ6IEE7 984 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 ODF2Q5BJF6 829 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 LEKR1Q6ZMV7 388 aa11.79□□□□□ -0.52
SHTN1-207ENST00000615301 ZNF644Q9H582 1327 aaPredicted RBP11.78□□□□□ -0.52
SHTN1-207ENST00000615301 RSPH4AQ5TD94 716 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 FAM177BA6PVY3 158 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 CCDC112Q8NEF3 446 aa11.78□□□□□ -0.52
SHTN1-207ENST00000615301 PRKCSHP14314 528 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms