RNA–Protein interactions for RNA: ENST00000613870.4

PSMB3-208, Transcript of proteasome subunit beta 3, humanhuman

TSL 3

Gene PSMB3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB3-208ENST00000613870 PIK3C2GO75747 1445 aa11.78□□□□□ -0.52
PSMB3-208ENST00000613870 RALGAPBQ86X10 1494 aa11.78□□□□□ -0.52
PSMB3-208ENST00000613870 HSPA5P11021 654 aaKnown RBP11.78□□□□□ -0.52
PSMB3-208ENST00000613870 MYOM2P54296 1465 aa11.77□□□□□ -0.52
PSMB3-208ENST00000613870 ASXL1Q8IXJ9 1541 aa11.77□□□□□ -0.52
PSMB3-208ENST00000613870 NBPF1Q3BBV0 1214 aa11.77□□□□□ -0.53
PSMB3-208ENST00000613870 CFAP70Q5T0N1 1121 aa11.77□□□□□ -0.53
PSMB3-208ENST00000613870 TMEM132EQ6IEE7 984 aa11.77□□□□□ -0.53
PSMB3-208ENST00000613870 NHSL1Q5SYE7 1610 aa11.76□□□□□ -0.53
PSMB3-208ENST00000613870 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
PSMB3-208ENST00000613870 WAPLQ7Z5K2 1190 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 DDX17Q92841 729 aaKnown RBP11.75□□□□□ -0.53
PSMB3-208ENST00000613870 C14orf93Q9H972 538 aaKnown RBP11.75□□□□□ -0.53
PSMB3-208ENST00000613870 STK26Q9P289 416 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 LRPPRCP42704 1394 aaKnown RBP11.75□□□□□ -0.53
PSMB3-208ENST00000613870 ABCC11Q96J66 1382 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 USP47Q96K76 1375 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 TECPR2O15040 1411 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 C1orf167Q5SNV9 1468 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 SHPRHQ149N8 1683 aa11.75□□□□□ -0.53
PSMB3-208ENST00000613870 ORAI2Q96SN7 254 aa11.74□□□□□ -0.53
PSMB3-208ENST00000613870 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
PSMB3-208ENST00000613870 LRP6O75581 1613 aa11.73□□□□□ -0.53
PSMB3-208ENST00000613870 TRPM1Q7Z4N2 1603 aa11.73□□□□□ -0.53
PSMB3-208ENST00000613870 POLR3GLQ9BT43 218 aa11.73□□□□□ -0.53
PSMB3-208ENST00000613870 YTHDC2Q9H6S0 1430 aaKnown RBP11.73□□□□□ -0.53
PSMB3-208ENST00000613870 PLEKHH1Q9ULM0 1364 aa11.73□□□□□ -0.53
PSMB3-208ENST00000613870 SPATA31A6Q5VVP1 1343 aa11.72□□□□□ -0.53
PSMB3-208ENST00000613870 POTEAQ6S8J7 498 aa11.72□□□□□ -0.53
PSMB3-208ENST00000613870 LAMC1P11047 1609 aa11.71□□□□□ -0.53
PSMB3-208ENST00000613870 LRRC59Q96AG4 307 aaKnown RBP11.71□□□□□ -0.53
PSMB3-208ENST00000613870 CDC42BPGQ6DT37 1551 aa11.71□□□□□ -0.54
PSMB3-208ENST00000613870 ST20-MTHFSA0A0A6YYL1 179 aa11.7□□□□□ -0.54
PSMB3-208ENST00000613870 SIRT1Q96EB6 747 aa11.7□□□□□ -0.54
PSMB3-208ENST00000613870 TRAK1Q9UPV9 953 aa11.7□□□□□ -0.54
PSMB3-208ENST00000613870 EIF3AQ14152 1382 aaKnown RBP11.69□□□□□ -0.54
PSMB3-208ENST00000613870 GPRASP1Q5JY77 1395 aa11.68□□□□□ -0.54
PSMB3-208ENST00000613870 SOS2Q07890 1332 aaPredicted RBP11.68□□□□□ -0.54
PSMB3-208ENST00000613870 NUTM2FA1L443 756 aa11.68□□□□□ -0.54
PSMB3-208ENST00000613870 PNPLA6Q8IY17 1366 aa11.67□□□□□ -0.54
PSMB3-208ENST00000613870 ADGRB1O14514 1584 aa11.67□□□□□ -0.54
PSMB3-208ENST00000613870 FMN2Q9NZ56 1722 aa11.67□□□□□ -0.54
PSMB3-208ENST00000613870 KIAA1210Q9ULL0 1709 aa11.67□□□□□ -0.54
PSMB3-208ENST00000613870 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
PSMB3-208ENST00000613870 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
PSMB3-208ENST00000613870 ESCO1Q5FWF5 840 aa11.67□□□□□ -0.54
PSMB3-208ENST00000613870 DIEXFQ68CQ4 756 aaKnown RBP11.67□□□□□ -0.54
PSMB3-208ENST00000613870 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
PSMB3-208ENST00000613870 MEX3CQ5U5Q3 659 aaKnown RBP11.66□□□□□ -0.54
PSMB3-208ENST00000613870 PRAM1Q96QH2 718 aa11.66□□□□□ -0.54
PSMB3-208ENST00000613870 POGKQ9P215 609 aa11.66□□□□□ -0.54
PSMB3-208ENST00000613870 RGPD8O14715 1765 aaPredicted RBP11.66□□□□□ -0.54
PSMB3-208ENST00000613870 DLC1Q96QB1 1528 aa11.65□□□□□ -0.54
PSMB3-208ENST00000613870 DDX10Q13206 875 aaKnown RBP11.65□□□□□ -0.54
PSMB3-208ENST00000613870 SAFB2Q14151 953 aaKnown RBP eCLIP11.65□□□□□ -0.54
PSMB3-208ENST00000613870 FOXO3O43524 673 aa11.64□□□□□ -0.55
PSMB3-208ENST00000613870 TMF1P82094 1093 aa11.64□□□□□ -0.55
PSMB3-208ENST00000613870 PXDNQ92626 1479 aa11.63□□□□□ -0.55
PSMB3-208ENST00000613870 NPHP3Q7Z494 1330 aa11.63□□□□□ -0.55
PSMB3-208ENST00000613870 CENPJQ9HC77 1338 aaPredicted RBP11.63□□□□□ -0.55
PSMB3-208ENST00000613870 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
PSMB3-208ENST00000613870 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
PSMB3-208ENST00000613870 WASHC2AQ641Q2 1341 aa11.61□□□□□ -0.55
PSMB3-208ENST00000613870 COL22A1Q8NFW1 1626 aaPredicted RBP11.61□□□□□ -0.55
PSMB3-208ENST00000613870 C11orf95C9JLR9 678 aaPredicted RBP11.61□□□□□ -0.55
PSMB3-208ENST00000613870 SLC24A1O60721 1099 aa11.61□□□□□ -0.55
PSMB3-208ENST00000613870 CCDC7Q96M83 1385 aa11.61□□□□□ -0.55
PSMB3-208ENST00000613870 AFF2P51816 1311 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 KIF7Q2M1P5 1343 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 USP32Q8NFA0 1604 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 KIF1AQ12756 1690 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 ADAMTS2O95450 1211 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 CDCA8Q53HL2 280 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 C8orf37Q96NL8 207 aa11.6□□□□□ -0.55
PSMB3-208ENST00000613870 ARHGEF28Q8N1W1 1705 aaKnown RBP11.6□□□□□ -0.55
PSMB3-208ENST00000613870 ADGRB2O60241 1585 aa11.59□□□□□ -0.55
PSMB3-208ENST00000613870 KRT28Q7Z3Y7 464 aa11.59□□□□□ -0.55
PSMB3-208ENST00000613870 PHF8Q9UPP1 1060 aa11.59□□□□□ -0.55
PSMB3-208ENST00000613870 MINK1Q8N4C8 1332 aaPredicted RBP11.59□□□□□ -0.55
PSMB3-208ENST00000613870 TESK2Q96S53 571 aa11.58□□□□□ -0.56
PSMB3-208ENST00000613870 SPATA31A3Q5VYP0 1347 aa11.58□□□□□ -0.56
PSMB3-208ENST00000613870 RXRBP28702 533 aa11.57□□□□□ -0.56
PSMB3-208ENST00000613870 PMFBP1Q8TBY8 1022 aa11.57□□□□□ -0.56
PSMB3-208ENST00000613870 NGLY1Q96IV0 654 aa11.57□□□□□ -0.56
PSMB3-208ENST00000613870 EVC2Q86UK5 1308 aa11.57□□□□□ -0.56
PSMB3-208ENST00000613870 PRR36Q9H6K5 1346 aa11.57□□□□□ -0.56
PSMB3-208ENST00000613870 WASLO00401 505 aaPredicted RBP11.56□□□□□ -0.56
PSMB3-208ENST00000613870 ANKARQ7Z5J8 1434 aa11.56□□□□□ -0.56
PSMB3-208ENST00000613870 QTRT2Q9H974 415 aaKnown RBP11.56□□□□□ -0.56
PSMB3-208ENST00000613870 MARF1Q9Y4F3 1742 aaKnown RBP11.56□□□□□ -0.56
PSMB3-208ENST00000613870 SRPK2P78362 688 aaKnown RBP11.55□□□□□ -0.56
PSMB3-208ENST00000613870 CNGB1Q14028 1251 aaPredicted RBP11.55□□□□□ -0.56
PSMB3-208ENST00000613870 FNBP4Q8N3X1 1017 aaPredicted RBP11.55□□□□□ -0.56
PSMB3-208ENST00000613870 PSME1Q06323 249 aa11.54□□□□□ -0.56
PSMB3-208ENST00000613870 TMC1Q8TDI8 760 aa11.54□□□□□ -0.56
PSMB3-208ENST00000613870 QRICH2Q9H0J4 1663 aa11.54□□□□□ -0.56
PSMB3-208ENST00000613870 TULP4Q9NRJ4 1543 aa11.54□□□□□ -0.56
PSMB3-208ENST00000613870 TNS3Q68CZ2 1445 aa11.53□□□□□ -0.56
PSMB3-208ENST00000613870 RBM6P78332 1123 aaKnown RBP11.53□□□□□ -0.56
PSMB3-208ENST00000613870 USP21Q9UK80 565 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms