RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
TARDBP-212ENST00000611008 SMYD5Q6GMV2 418 aa10.49□□□□□ -0.73
TARDBP-212ENST00000611008 INSM1Q01101 510 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-212ENST00000611008 SNIP1Q8TAD8 396 aaKnown RBP10.48□□□□□ -0.73
TARDBP-212ENST00000611008 SMPD1P17405 629 aa10.47□□□□□ -0.73
TARDBP-212ENST00000611008 RNF19BQ6ZMZ0 732 aa10.47□□□□□ -0.73
TARDBP-212ENST00000611008 WIPF1O43516 503 aa10.46□□□□□ -0.73
TARDBP-212ENST00000611008 TRIM32Q13049 653 aa10.46□□□□□ -0.73
TARDBP-212ENST00000611008 ATP13A2Q9NQ11 1180 aa10.46□□□□□ -0.73
TARDBP-212ENST00000611008 TESPA1A2RU30 521 aaPredicted RBP10.45□□□□□ -0.74
TARDBP-212ENST00000611008 Q3C1V9 767 aa10.44□□□□□ -0.74
TARDBP-212ENST00000611008 MRGPRX2Q96LB1 330 aa10.44□□□□□ -0.74
TARDBP-212ENST00000611008 SENP2Q9HC62 589 aa10.44□□□□□ -0.74
TARDBP-212ENST00000611008 SNRPBP14678 240 aaKnown RBP10.43□□□□□ -0.74
TARDBP-212ENST00000611008 J3QL48 77 aa10.42□□□□□ -0.74
TARDBP-212ENST00000611008 GPR37O15354 613 aa10.42□□□□□ -0.74
TARDBP-212ENST00000611008 TERTO14746 1132 aaKnown RBP10.41□□□□□ -0.74
TARDBP-212ENST00000611008 MMP16P51512 607 aa10.41□□□□□ -0.74
TARDBP-212ENST00000611008 TRIM47Q96LD4 638 aa10.41□□□□□ -0.74
TARDBP-212ENST00000611008 PHOX2BQ99453 314 aa10.41□□□□□ -0.74
TARDBP-212ENST00000611008 REPIN1Q9BWE0 567 aaKnown RBP10.41□□□□□ -0.74
TARDBP-212ENST00000611008 HPS1Q92902 700 aa10.38□□□□□ -0.75
TARDBP-212ENST00000611008 KIFC2Q96AC6 838 aa10.38□□□□□ -0.75
TARDBP-212ENST00000611008 USB1Q9BQ65 265 aaKnown RBP10.37□□□□□ -0.75
TARDBP-212ENST00000611008 DXOO77932 396 aaKnown RBP10.36□□□□□ -0.75
TARDBP-212ENST00000611008 CCDC24Q8N4L8 307 aa10.36□□□□□ -0.75
TARDBP-212ENST00000611008 LCE2CQ5TA81 110 aa10.35□□□□□ -0.75
TARDBP-212ENST00000611008 RC3H1Q5TC82 1133 aaKnown RBP10.35□□□□□ -0.75
TARDBP-212ENST00000611008 KDM4AO75164 1064 aa10.33□□□□□ -0.76
TARDBP-212ENST00000611008 CD46P15529 392 aa10.33□□□□□ -0.76
TARDBP-212ENST00000611008 WNT7BP56706 349 aa10.32□□□□□ -0.76
TARDBP-212ENST00000611008 GPIHBP1Q8IV16 184 aa10.32□□□□□ -0.76
TARDBP-212ENST00000611008 SLC16A10Q8TF71 515 aa10.31□□□□□ -0.76
TARDBP-212ENST00000611008 ALDH1A1P00352 501 aa10.3□□□□□ -0.76
TARDBP-212ENST00000611008 SKOR1P84550 965 aa10.3□□□□□ -0.76
TARDBP-212ENST00000611008 FAM181BA6NEQ2 426 aa10.29□□□□□ -0.76
TARDBP-212ENST00000611008 USP46P62068 366 aa10.29□□□□□ -0.76
TARDBP-212ENST00000611008 HLA-CQ95604 372 aa10.26□□□□□ -0.77
TARDBP-212ENST00000611008 NXF1Q9UBU9 619 aaKnown RBP10.26□□□□□ -0.77
TARDBP-212ENST00000611008 HOXA2O43364 376 aa10.23□□□□□ -0.77
TARDBP-212ENST00000611008 JUNDP17535 347 aa10.23□□□□□ -0.77
TARDBP-212ENST00000611008 EHBP1Q8NDI1 1231 aa10.23□□□□□ -0.77
TARDBP-212ENST00000611008 CAPN5O15484 640 aaPredicted RBP10.22□□□□□ -0.77
TARDBP-212ENST00000611008 MDM2Q00987 491 aaPredicted RBP10.22□□□□□ -0.77
TARDBP-212ENST00000611008 MAP2K5Q13163 448 aa10.22□□□□□ -0.77
TARDBP-212ENST00000611008 IRF7Q92985 503 aa10.22□□□□□ -0.77
TARDBP-212ENST00000611008 WASF2Q9Y6W5 498 aa10.22□□□□□ -0.77
TARDBP-212ENST00000611008 BMP1P13497 986 aa10.21□□□□□ -0.77
TARDBP-212ENST00000611008 NPAS3Q8IXF0 933 aa10.21□□□□□ -0.77
TARDBP-212ENST00000611008 SIAH2O43255 324 aa10.2□□□□□ -0.78
TARDBP-212ENST00000611008 GMPRP36959 345 aa10.2□□□□□ -0.78
TARDBP-212ENST00000611008 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
TARDBP-212ENST00000611008 ZSCAN1Q8NBB4 408 aa10.2□□□□□ -0.78
TARDBP-212ENST00000611008 NUDT12Q9BQG2 462 aa10.2□□□□□ -0.78
TARDBP-212ENST00000611008 TRIM46Q7Z4K8 759 aa10.19□□□□□ -0.78
TARDBP-212ENST00000611008 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
TARDBP-212ENST00000611008 IRF6O14896 467 aa10.18□□□□□ -0.78
TARDBP-212ENST00000611008 PTCRAQ6ISU1 281 aaPredicted RBP10.18□□□□□ -0.78
TARDBP-212ENST00000611008 RETREG3Q86VR2 466 aa10.17□□□□□ -0.78
TARDBP-212ENST00000611008 VEGFBP49765 207 aa10.16□□□□□ -0.78
TARDBP-212ENST00000611008 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
TARDBP-212ENST00000611008 H3BM21 787 aa10.14□□□□□ -0.79
TARDBP-212ENST00000611008 MINK1Q8N4C8 1332 aaPredicted RBP10.13□□□□□ -0.79
TARDBP-212ENST00000611008 SH3BP2P78314 561 aa10.13□□□□□ -0.79
TARDBP-212ENST00000611008 GPCPD1Q9NPB8 672 aa10.13□□□□□ -0.79
TARDBP-212ENST00000611008 CCNYL3P0C7X3 344 aa10.12□□□□□ -0.79
TARDBP-212ENST00000611008 MS4A1P11836 297 aa10.12□□□□□ -0.79
TARDBP-212ENST00000611008 LORP23490 312 aaPredicted RBP10.12□□□□□ -0.79
TARDBP-212ENST00000611008 CLCN1P35523 988 aa10.12□□□□□ -0.79
TARDBP-212ENST00000611008 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
TARDBP-212ENST00000611008 C6orf229H3BNL8 230 aa10.11□□□□□ -0.79
TARDBP-212ENST00000611008 FAM217BQ9NTX9 383 aaPredicted RBP10.11□□□□□ -0.79
TARDBP-212ENST00000611008 ERBB4Q15303 1308 aa10.1□□□□□ -0.79
TARDBP-212ENST00000611008 TULP1O00294 542 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-212ENST00000611008 FDX1P10109 184 aa10.1□□□□□ -0.79
TARDBP-212ENST00000611008 KRI1Q8N9T8 703 aaKnown RBP10.1□□□□□ -0.79
TARDBP-212ENST00000611008 CCDC102AQ96A19 550 aa10.09□□□□□ -0.79
TARDBP-212ENST00000611008 PLEKHG3A1L390 1219 aa10.08□□□□□ -0.8
TARDBP-212ENST00000611008 UNC93B1Q9H1C4 597 aa10.08□□□□□ -0.8
TARDBP-212ENST00000611008 PLCB2Q00722 1185 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 SCARF1Q14162 830 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 PTPRNQ16849 979 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 LINC01559Q495D7 138 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 TLL2Q9Y6L7 1015 aa10.07□□□□□ -0.8
TARDBP-212ENST00000611008 BAP1Q92560 729 aa10.06□□□□□ -0.8
TARDBP-212ENST00000611008 EVA1BQ9NVM1 165 aa10.06□□□□□ -0.8
TARDBP-212ENST00000611008 VARSP26640 1264 aaKnown RBP10.05□□□□□ -0.8
TARDBP-212ENST00000611008 NNTQ13423 1086 aa10.05□□□□□ -0.8
TARDBP-212ENST00000611008 MRPL14Q6P1L8 145 aaKnown RBP10.05□□□□□ -0.8
TARDBP-212ENST00000611008 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
TARDBP-212ENST00000611008 MPNDQ8N594 471 aa10.03□□□□□ -0.8
TARDBP-212ENST00000611008 ZNF511Q8NB15 262 aa10.03□□□□□ -0.8
TARDBP-212ENST00000611008 PURBQ96QR8 312 aaKnown RBP10.03□□□□□ -0.8
TARDBP-212ENST00000611008 ADH1CP00326 375 aa10.01□□□□□ -0.81
TARDBP-212ENST00000611008 WDR4P57081 412 aaKnown RBP10.01□□□□□ -0.81
TARDBP-212ENST00000611008 TIMP2P16035 220 aa10□□□□□ -0.81
TARDBP-212ENST00000611008 PRR7Q8TB68 274 aa10□□□□□ -0.81
TARDBP-212ENST00000611008 SPIRE2Q8WWL2 714 aa9.99□□□□□ -0.81
TARDBP-212ENST00000611008 LOC100996750A0A140TA64 210 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms