RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 COL16A1Q07092 1604 aaPredicted RBP28.01■■■□□ 2.07
TCF3-219ENST00000610756 LRRC59Q96AG4 307 aaKnown RBP27.99■■■□□ 2.07
TCF3-219ENST00000610756 PRAM1Q96QH2 718 aa27.98■■■□□ 2.07
TCF3-219ENST00000610756 KNDC1Q76NI1 1749 aa27.98■■■□□ 2.07
TCF3-219ENST00000610756 DDX17Q92841 729 aaKnown RBP27.97■■■□□ 2.07
TCF3-219ENST00000610756 SPATA31A6Q5VVP1 1343 aa27.96■■■□□ 2.07
TCF3-219ENST00000610756 ADGRB1O14514 1584 aa27.96■■■□□ 2.07
TCF3-219ENST00000610756 POGKQ9P215 609 aa27.95■■■□□ 2.07
TCF3-219ENST00000610756 CDC42BPGQ6DT37 1551 aa27.95■■■□□ 2.06
TCF3-219ENST00000610756 ESCO1Q5FWF5 840 aa27.94■■■□□ 2.06
TCF3-219ENST00000610756 TRAK1Q9UPV9 953 aa27.94■■■□□ 2.06
TCF3-219ENST00000610756 RGS17Q9UGC6 210 aaPredicted RBP27.93■■■□□ 2.06
TCF3-219ENST00000610756 SIN3AQ96ST3 1273 aa27.92■■■□□ 2.06
TCF3-219ENST00000610756 DLC1Q96QB1 1528 aa27.92■■■□□ 2.06
TCF3-219ENST00000610756 SOS2Q07890 1332 aaPredicted RBP27.91■■■□□ 2.06
TCF3-219ENST00000610756 SAFB2Q14151 953 aaKnown RBP eCLIP27.91■■■□□ 2.06
TCF3-219ENST00000610756 NHSL1Q5SYE7 1610 aa27.9■■■□□ 2.06
TCF3-219ENST00000610756 NUTM2FA1L443 756 aa27.9■■■□□ 2.06
TCF3-219ENST00000610756 L3MBTL2Q969R5 705 aa27.89■■■□□ 2.05
TCF3-219ENST00000610756 NPHP3Q7Z494 1330 aa27.86■■■□□ 2.05
TCF3-219ENST00000610756 SOCS7O14512 581 aa27.86■■■□□ 2.05
TCF3-219ENST00000610756 NEUROD1Q13562 356 aa27.86■■■□□ 2.05
TCF3-219ENST00000610756 FOXO3O43524 673 aa27.85■■■□□ 2.05
TCF3-219ENST00000610756 SHPRHQ149N8 1683 aa27.83■■■□□ 2.05
TCF3-219ENST00000610756 NBPF1Q3BBV0 1214 aa27.82■■■□□ 2.04
TCF3-219ENST00000610756 PNPLA6Q8IY17 1366 aa27.81■■■□□ 2.04
TCF3-219ENST00000610756 NUTM2BA6NNL0 878 aaPredicted RBP27.8■■■□□ 2.04
TCF3-219ENST00000610756 NUTM2EB1AL46 878 aaPredicted RBP27.8■■■□□ 2.04
TCF3-219ENST00000610756 MEX3CQ5U5Q3 659 aaKnown RBP27.8■■■□□ 2.04
TCF3-219ENST00000610756 NUTM2AQ8IVF1 878 aaPredicted RBP27.8■■■□□ 2.04
TCF3-219ENST00000610756 LRP6O75581 1613 aa27.8■■■□□ 2.04
TCF3-219ENST00000610756 HIRIP3Q9BW71 556 aaPredicted RBP27.79■■■□□ 2.04
TCF3-219ENST00000610756 MINK1Q8N4C8 1332 aaPredicted RBP27.79■■■□□ 2.04
TCF3-219ENST00000610756 FMN2Q9NZ56 1722 aa27.78■■■□□ 2.04
TCF3-219ENST00000610756 WASLO00401 505 aaPredicted RBP27.77■■■□□ 2.04
TCF3-219ENST00000610756 POTEAQ6S8J7 498 aa27.77■■■□□ 2.04
TCF3-219ENST00000610756 PHF8Q9UPP1 1060 aa27.77■■■□□ 2.04
TCF3-219ENST00000610756 KIAA1210Q9ULL0 1709 aa27.75■■■□□ 2.03
TCF3-219ENST00000610756 XPCQ01831 940 aaPredicted RBP27.74■■■□□ 2.03
TCF3-219ENST00000610756 ANKARQ7Z5J8 1434 aa27.74■■■□□ 2.03
TCF3-219ENST00000610756 PXDNQ92626 1479 aa27.74■■■□□ 2.03
TCF3-219ENST00000610756 ADGRB2O60241 1585 aa27.72■■■□□ 2.03
TCF3-219ENST00000610756 ZNF772Q68DY9 489 aaPredicted RBP27.72■■■□□ 2.03
TCF3-219ENST00000610756 KRT28Q7Z3Y7 464 aa27.72■■■□□ 2.03
TCF3-219ENST00000610756 EIF3AQ14152 1382 aaKnown RBP27.71■■■□□ 2.03
TCF3-219ENST00000610756 PSME1Q06323 249 aa27.69■■■□□ 2.02
TCF3-219ENST00000610756 SPATA31A3Q5VYP0 1347 aa27.68■■■□□ 2.02
TCF3-219ENST00000610756 PRR36Q9H6K5 1346 aa27.68■■■□□ 2.02
TCF3-219ENST00000610756 PMFBP1Q8TBY8 1022 aa27.67■■■□□ 2.02
TCF3-219ENST00000610756 KIF1AQ12756 1690 aa27.66■■■□□ 2.02
TCF3-219ENST00000610756 CDK19Q9BWU1 502 aa27.66■■■□□ 2.02
TCF3-219ENST00000610756 ADAMTS2O95450 1211 aa27.65■■■□□ 2.02
TCF3-219ENST00000610756 ARHGEF28Q8N1W1 1705 aaKnown RBP27.65■■■□□ 2.02
TCF3-219ENST00000610756 NUDT16Q96DE0 195 aaKnown RBP27.64■■■□□ 2.01
TCF3-219ENST00000610756 C8orf37Q96NL8 207 aa27.64■■■□□ 2.01
TCF3-219ENST00000610756 TULP4Q9NRJ4 1543 aa27.63■■■□□ 2.01
TCF3-219ENST00000610756 AFF2P51816 1311 aa27.62■■■□□ 2.01
TCF3-219ENST00000610756 CENPJQ9HC77 1338 aaPredicted RBP27.62■■■□□ 2.01
TCF3-219ENST00000610756 USP32Q8NFA0 1604 aa27.62■■■□□ 2.01
TCF3-219ENST00000610756 NBPF8Q3BBV2 869 aa27.62■■■□□ 2.01
TCF3-219ENST00000610756 NGLY1Q96IV0 654 aa27.62■■■□□ 2.01
TCF3-219ENST00000610756 RGPD8O14715 1765 aaPredicted RBP27.61■■■□□ 2.01
TCF3-219ENST00000610756 SBNO1A3KN83 1393 aa27.61■■■□□ 2.01
TCF3-219ENST00000610756 COL22A1Q8NFW1 1626 aaPredicted RBP27.6■■■□□ 2.01
TCF3-219ENST00000610756 ROCK2O75116 1388 aaKnown RBP27.59■■■□□ 2.01
TCF3-219ENST00000610756 TONSLQ96HA7 1378 aa27.59■■■□□ 2.01
TCF3-219ENST00000610756 NGDNQ8NEJ9 315 aaKnown RBP27.58■■■□□ 2.01
TCF3-219ENST00000610756 CCDC61Q9Y6R9 512 aa27.58■■■□□ 2.01
TCF3-219ENST00000610756 FNBP4Q8N3X1 1017 aaPredicted RBP27.57■■■□□ 2
TCF3-219ENST00000610756 GPRASP1Q5JY77 1395 aa27.56■■■□□ 2
TCF3-219ENST00000610756 TNS3Q68CZ2 1445 aa27.55■■■□□ 2
TCF3-219ENST00000610756 RXRBP28702 533 aa27.55■■■□□ 2
TCF3-219ENST00000610756 QTRT2Q9H974 415 aaKnown RBP27.55■■■□□ 2
TCF3-219ENST00000610756 TRPM1Q7Z4N2 1603 aa27.54■■■□□ 2
TCF3-219ENST00000610756 ATP7BP35670 1465 aa27.53■■■□□ 2
TCF3-219ENST00000610756 ARHGEF10O15013 1369 aa27.53■■■□□ 2
TCF3-219ENST00000610756 PLEKHG3A1L390 1219 aa27.52■■■□□ 2
TCF3-219ENST00000610756 LMOD2Q6P5Q4 547 aa27.52■■■□□ 2
TCF3-219ENST00000610756 SRPK2P78362 688 aaKnown RBP27.51■■□□□ 1.99
TCF3-219ENST00000610756 PCGF6Q9BYE7 350 aa27.51■■□□□ 1.99
TCF3-219ENST00000610756 USP21Q9UK80 565 aa27.51■■□□□ 1.99
TCF3-219ENST00000610756 CABLES1Q8TDN4 633 aa27.48■■□□□ 1.99
TCF3-219ENST00000610756 CABP2Q9NPB3 220 aa27.48■■□□□ 1.99
TCF3-219ENST00000610756 ACEP12821 1306 aa27.47■■□□□ 1.99
TCF3-219ENST00000610756 RBM6P78332 1123 aaKnown RBP27.47■■□□□ 1.99
TCF3-219ENST00000610756 CARD11Q9BXL7 1154 aa27.47■■□□□ 1.99
TCF3-219ENST00000610756 POLR3AO14802 1390 aaPredicted RBP27.46■■□□□ 1.99
TCF3-219ENST00000610756 EVC2Q86UK5 1308 aa27.45■■□□□ 1.99
TCF3-219ENST00000610756 HAP1P54257 671 aaPredicted RBP27.45■■□□□ 1.99
TCF3-219ENST00000610756 TRPC5Q9UL62 973 aaPredicted RBP27.45■■□□□ 1.99
TCF3-219ENST00000610756 PAK3O75914 559 aaPredicted RBP27.44■■□□□ 1.98
TCF3-219ENST00000610756 CLSPNQ9HAW4 1339 aa27.43■■□□□ 1.98
TCF3-219ENST00000610756 BCL9LQ86UU0 1499 aa27.41■■□□□ 1.98
TCF3-219ENST00000610756 PLEKHG5O94827 1062 aa27.41■■□□□ 1.98
TCF3-219ENST00000610756 CABP1Q9NZU7 370 aa27.41■■□□□ 1.98
TCF3-219ENST00000610756 ITSN1Q15811 1721 aa27.4■■□□□ 1.98
TCF3-219ENST00000610756 RALGAPBQ86X10 1494 aa27.4■■□□□ 1.98
TCF3-219ENST00000610756 CDK12Q9NYV4 1490 aaPredicted RBP27.4■■□□□ 1.98
TCF3-219ENST00000610756 TRPM3Q9HCF6 1732 aaPredicted RBP27.4■■□□□ 1.98
TCF3-219ENST00000610756 TIMELESSQ9UNS1 1208 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms