RNA–Protein interactions for RNA: ENST00000609293.1

LINC01990-201, Transcript of long intergenic non-protein coding RNA 1990, humanhuman

TSL 1 (best) BASIC

Gene LINC01990, Length 1,487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01990-201ENST00000609293 DDX12PQ92771 950 aa12.74□□□□□ -0.37
LINC01990-201ENST00000609293 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
LINC01990-201ENST00000609293 MLECQ14165 292 aa12.73□□□□□ -0.37
LINC01990-201ENST00000609293 BCAMP50895 628 aa12.72□□□□□ -0.37
LINC01990-201ENST00000609293 MYO5CQ9NQX4 1742 aa12.72□□□□□ -0.37
LINC01990-201ENST00000609293 FAM98CQ17RN3 349 aaKnown RBP12.72□□□□□ -0.37
LINC01990-201ENST00000609293 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.38
LINC01990-201ENST00000609293 PDIA6Q15084 440 aa12.71□□□□□ -0.38
LINC01990-201ENST00000609293 ARHGEF12Q9NZN5 1544 aa12.71□□□□□ -0.38
LINC01990-201ENST00000609293 C9orf84Q5VXU9 1444 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 SCAPERQ9BY12 1400 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 STRCQ7RTU9 1775 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 CDK13Q14004 1512 aaKnown RBP12.69□□□□□ -0.38
LINC01990-201ENST00000609293 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
LINC01990-201ENST00000609293 MAP3K7O43318 606 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 EN1Q05925 392 aaPredicted RBP12.69□□□□□ -0.38
LINC01990-201ENST00000609293 NBR1Q14596 966 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 PACS2Q86VP3 889 aa12.69□□□□□ -0.38
LINC01990-201ENST00000609293 SEPT9Q9UHD8 586 aaPredicted RBP12.69□□□□□ -0.38
LINC01990-201ENST00000609293 DISP3Q9P2K9 1392 aa12.68□□□□□ -0.38
LINC01990-201ENST00000609293 ATP10AO60312 1499 aa12.68□□□□□ -0.38
LINC01990-201ENST00000609293 WDR70Q9NW82 654 aa12.67□□□□□ -0.38
LINC01990-201ENST00000609293 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
LINC01990-201ENST00000609293 PLCH2O75038 1416 aa12.67□□□□□ -0.38
LINC01990-201ENST00000609293 EEA1Q15075 1411 aa12.67□□□□□ -0.38
LINC01990-201ENST00000609293 LRCH3Q96II8 777 aa12.66□□□□□ -0.38
LINC01990-201ENST00000609293 E2F4Q16254 413 aa12.65□□□□□ -0.38
LINC01990-201ENST00000609293 TSR3Q9UJK0 312 aaKnown RBP12.65□□□□□ -0.38
LINC01990-201ENST00000609293 AMER1Q5JTC6 1135 aaPredicted RBP12.65□□□□□ -0.38
LINC01990-201ENST00000609293 WBP1LQ9NX94 342 aa12.65□□□□□ -0.38
LINC01990-201ENST00000609293 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.39
LINC01990-201ENST00000609293 KCNC4Q03721 635 aa12.64□□□□□ -0.39
LINC01990-201ENST00000609293 SPATA31D1Q6ZQQ2 1576 aa12.64□□□□□ -0.39
LINC01990-201ENST00000609293 CEBPAP49715 358 aaPredicted RBP12.63□□□□□ -0.39
LINC01990-201ENST00000609293 KIF14Q15058 1648 aa12.63□□□□□ -0.39
LINC01990-201ENST00000609293 ZNF518AQ6AHZ1 1483 aa12.63□□□□□ -0.39
LINC01990-201ENST00000609293 C3P01024 1663 aa12.63□□□□□ -0.39
LINC01990-201ENST00000609293 SOCS7O14512 581 aa12.62□□□□□ -0.39
LINC01990-201ENST00000609293 EFCAB2Q5VUJ9 269 aa12.62□□□□□ -0.39
LINC01990-201ENST00000609293 ILDR2Q71H61 639 aa12.62□□□□□ -0.39
LINC01990-201ENST00000609293 KDM5CP41229 1560 aa12.62□□□□□ -0.39
LINC01990-201ENST00000609293 HPS5Q9UPZ3 1129 aa12.61□□□□□ -0.39
LINC01990-201ENST00000609293 ARIH1Q9Y4X5 557 aaPredicted RBP12.61□□□□□ -0.39
LINC01990-201ENST00000609293 ARHGAP5Q13017 1502 aa12.6□□□□□ -0.39
LINC01990-201ENST00000609293 DIP2CQ9Y2E4 1556 aa12.6□□□□□ -0.39
LINC01990-201ENST00000609293 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
LINC01990-201ENST00000609293 TSR1Q2NL82 804 aaKnown RBP12.59□□□□□ -0.39
LINC01990-201ENST00000609293 ATP1B4Q9UN42 357 aaPredicted RBP12.59□□□□□ -0.39
LINC01990-201ENST00000609293 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
LINC01990-201ENST00000609293 TSKSQ9UJT2 592 aa12.59□□□□□ -0.39
LINC01990-201ENST00000609293 CDC42BPBQ9Y5S2 1711 aa12.58□□□□□ -0.4
LINC01990-201ENST00000609293 CDK11AQ9UQ88 783 aaPredicted RBP12.58□□□□□ -0.4
LINC01990-201ENST00000609293 PTPRTO14522 1441 aa12.58□□□□□ -0.4
LINC01990-201ENST00000609293 FMN1Q68DA7 1419 aa12.58□□□□□ -0.4
LINC01990-201ENST00000609293 PRSS12P56730 875 aa12.57□□□□□ -0.4
LINC01990-201ENST00000609293 CDCA7LQ96GN5 454 aa12.57□□□□□ -0.4
LINC01990-201ENST00000609293 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
LINC01990-201ENST00000609293 LRRIQ1Q96JM4 1722 aa12.56□□□□□ -0.4
LINC01990-201ENST00000609293 PPP4CP60510 307 aa12.56□□□□□ -0.4
LINC01990-201ENST00000609293 PAXIP1Q6ZW49 1069 aaPredicted RBP12.56□□□□□ -0.4
LINC01990-201ENST00000609293 ITSN2Q9NZM3 1697 aa12.55□□□□□ -0.4
LINC01990-201ENST00000609293 CLIP1P30622 1438 aa12.55□□□□□ -0.4
LINC01990-201ENST00000609293 ESF1Q9H501 851 aaKnown RBP12.55□□□□□ -0.4
LINC01990-201ENST00000609293 TROQ12816 1431 aaPredicted RBP12.54□□□□□ -0.4
LINC01990-201ENST00000609293 GRXCR2A6NFK2 248 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 AFAP1Q8N556 730 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 PREX2Q70Z35 1606 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 IQSEC2Q5JU85 1478 aa12.54□□□□□ -0.4
LINC01990-201ENST00000609293 AGLP35573 1532 aa12.53□□□□□ -0.4
LINC01990-201ENST00000609293 MLH3Q9UHC1 1453 aa12.53□□□□□ -0.4
LINC01990-201ENST00000609293 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
LINC01990-201ENST00000609293 ABCC1P33527 1531 aa12.52□□□□□ -0.4
LINC01990-201ENST00000609293 SUPT6HQ7KZ85 1726 aaKnown RBP12.52□□□□□ -0.4
LINC01990-201ENST00000609293 TRAPPC8Q9Y2L5 1435 aa12.52□□□□□ -0.4
LINC01990-201ENST00000609293 KIDINS220Q9ULH0 1771 aa12.52□□□□□ -0.41
LINC01990-201ENST00000609293 ARHGAP35Q9NRY4 1499 aa12.52□□□□□ -0.41
LINC01990-201ENST00000609293 MROH2AA6NES4 1674 aa12.51□□□□□ -0.41
LINC01990-201ENST00000609293 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
LINC01990-201ENST00000609293 CNTLNQ9NXG0 1405 aa12.51□□□□□ -0.41
LINC01990-201ENST00000609293 UBTFP17480 764 aaKnown RBP12.5□□□□□ -0.41
LINC01990-201ENST00000609293 CDC42BPAQ5VT25 1732 aa12.5□□□□□ -0.41
LINC01990-201ENST00000609293 CAMSAP1Q5T5Y3 1602 aa12.49□□□□□ -0.41
LINC01990-201ENST00000609293 SAMD7Q7Z3H4 446 aa12.49□□□□□ -0.41
LINC01990-201ENST00000609293 TATDN2Q93075 761 aa12.49□□□□□ -0.41
LINC01990-201ENST00000609293 RBM27Q9P2N5 1060 aaKnown RBP12.49□□□□□ -0.41
LINC01990-201ENST00000609293 PNMA3Q9UL41 463 aa12.48□□□□□ -0.41
LINC01990-201ENST00000609293 SMAPO00193 183 aa12.46□□□□□ -0.41
LINC01990-201ENST00000609293 Q6ZNB5 142 aa12.46□□□□□ -0.41
LINC01990-201ENST00000609293 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
LINC01990-201ENST00000609293 ZNF142P52746 1687 aaPredicted RBP12.46□□□□□ -0.41
LINC01990-201ENST00000609293 OSBPP22059 807 aa12.46□□□□□ -0.42
LINC01990-201ENST00000609293 CLTCQ00610 1675 aaKnown RBP12.46□□□□□ -0.42
LINC01990-201ENST00000609293 MYO3AQ8NEV4 1616 aa12.45□□□□□ -0.42
LINC01990-201ENST00000609293 NPATQ14207 1427 aa12.45□□□□□ -0.42
LINC01990-201ENST00000609293 CCDC18Q5T9S5 1454 aa12.45□□□□□ -0.42
LINC01990-201ENST00000609293 SAMD9LQ8IVG5 1584 aa12.44□□□□□ -0.42
LINC01990-201ENST00000609293 FAM198AQ9UFP1 575 aa12.44□□□□□ -0.42
LINC01990-201ENST00000609293 PRIM1P49642 420 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms