RNA–Protein interactions for RNA: ENST00000608657.5

ITGB5-212, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-212ENST00000608657 ADGRL3Q9HAR2 1447 aa12.49□□□□□ -0.41
ITGB5-212ENST00000608657 SAFB2Q14151 953 aaKnown RBP eCLIP12.49□□□□□ -0.41
ITGB5-212ENST00000608657 RBM33Q96EV2 1170 aaKnown RBP12.49□□□□□ -0.41
ITGB5-212ENST00000608657 CDC42BPGQ6DT37 1551 aa12.47□□□□□ -0.41
ITGB5-212ENST00000608657 IQSEC2Q5JU85 1478 aa12.47□□□□□ -0.41
ITGB5-212ENST00000608657 MSH6P52701 1360 aa12.47□□□□□ -0.41
ITGB5-212ENST00000608657 EIF4G2P78344 907 aaKnown RBP eCLIP12.47□□□□□ -0.41
ITGB5-212ENST00000608657 MINK1Q8N4C8 1332 aaPredicted RBP12.46□□□□□ -0.41
ITGB5-212ENST00000608657 FMN2Q9NZ56 1722 aa12.45□□□□□ -0.42
ITGB5-212ENST00000608657 ST20-MTHFSA0A0A6YYL1 179 aa12.45□□□□□ -0.42
ITGB5-212ENST00000608657 DCCP43146 1447 aa12.45□□□□□ -0.42
ITGB5-212ENST00000608657 SBNO2Q9Y2G9 1366 aa12.44□□□□□ -0.42
ITGB5-212ENST00000608657 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
ITGB5-212ENST00000608657 HSPA5P11021 654 aaKnown RBP12.44□□□□□ -0.42
ITGB5-212ENST00000608657 CERKQ8TCT0 537 aa12.44□□□□□ -0.42
ITGB5-212ENST00000608657 HIRIP3Q9BW71 556 aaPredicted RBP12.44□□□□□ -0.42
ITGB5-212ENST00000608657 TULP4Q9NRJ4 1543 aa12.43□□□□□ -0.42
ITGB5-212ENST00000608657 C19orf44Q9H6X5 657 aa12.43□□□□□ -0.42
ITGB5-212ENST00000608657 ATF3P18847 181 aa12.42□□□□□ -0.42
ITGB5-212ENST00000608657 DIEXFQ68CQ4 756 aaKnown RBP12.42□□□□□ -0.42
ITGB5-212ENST00000608657 ITSN1Q15811 1721 aa12.42□□□□□ -0.42
ITGB5-212ENST00000608657 CADPS2Q86UW7 1296 aa12.41□□□□□ -0.42
ITGB5-212ENST00000608657 RGPD8O14715 1765 aaPredicted RBP12.41□□□□□ -0.42
ITGB5-212ENST00000608657 EVC2Q86UK5 1308 aa12.4□□□□□ -0.42
ITGB5-212ENST00000608657 WASLO00401 505 aaPredicted RBP12.4□□□□□ -0.42
ITGB5-212ENST00000608657 SLC24A1O60721 1099 aa12.4□□□□□ -0.42
ITGB5-212ENST00000608657 TESK2Q96S53 571 aa12.4□□□□□ -0.42
ITGB5-212ENST00000608657 USP32Q8NFA0 1604 aa12.4□□□□□ -0.42
ITGB5-212ENST00000608657 MST1RQ04912 1400 aa12.39□□□□□ -0.43
ITGB5-212ENST00000608657 CENPBP07199 599 aaPredicted RBP12.39□□□□□ -0.43
ITGB5-212ENST00000608657 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
ITGB5-212ENST00000608657 TMF1P82094 1093 aa12.39□□□□□ -0.43
ITGB5-212ENST00000608657 TOPAZ1Q8N9V7 1692 aa12.38□□□□□ -0.43
ITGB5-212ENST00000608657 ANKARQ7Z5J8 1434 aa12.38□□□□□ -0.43
ITGB5-212ENST00000608657 CDK19Q9BWU1 502 aa12.38□□□□□ -0.43
ITGB5-212ENST00000608657 DISP3Q9P2K9 1392 aa12.38□□□□□ -0.43
ITGB5-212ENST00000608657 ATP7BP35670 1465 aa12.38□□□□□ -0.43
ITGB5-212ENST00000608657 NUTM2FA1L443 756 aa12.37□□□□□ -0.43
ITGB5-212ENST00000608657 C1orf167Q5SNV9 1468 aa12.37□□□□□ -0.43
ITGB5-212ENST00000608657 KIF1AQ12756 1690 aa12.37□□□□□ -0.43
ITGB5-212ENST00000608657 UBAP1LF5GYI3 381 aa12.36□□□□□ -0.43
ITGB5-212ENST00000608657 TOM1O60784 492 aa12.36□□□□□ -0.43
ITGB5-212ENST00000608657 CDCA8Q53HL2 280 aa12.36□□□□□ -0.43
ITGB5-212ENST00000608657 CABP2Q9NPB3 220 aa12.36□□□□□ -0.43
ITGB5-212ENST00000608657 ROBO1Q9Y6N7 1651 aa12.35□□□□□ -0.43
ITGB5-212ENST00000608657 ATAD2Q6PL18 1390 aa12.35□□□□□ -0.43
ITGB5-212ENST00000608657 PRR36Q9H6K5 1346 aa12.35□□□□□ -0.43
ITGB5-212ENST00000608657 NUDT16Q96DE0 195 aaKnown RBP12.34□□□□□ -0.43
ITGB5-212ENST00000608657 SLAIN2Q9P270 581 aa12.34□□□□□ -0.43
ITGB5-212ENST00000608657 MYOM1P52179 1685 aa12.34□□□□□ -0.43
ITGB5-212ENST00000608657 POLR3GLQ9BT43 218 aa12.33□□□□□ -0.44
ITGB5-212ENST00000608657 PPIP5K1Q6PFW1 1433 aa12.33□□□□□ -0.44
ITGB5-212ENST00000608657 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
ITGB5-212ENST00000608657 ESCO1Q5FWF5 840 aa12.32□□□□□ -0.44
ITGB5-212ENST00000608657 PUS7Q96PZ0 661 aaKnown RBP12.32□□□□□ -0.44
ITGB5-212ENST00000608657 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
ITGB5-212ENST00000608657 PIP4K2BP78356 416 aa12.31□□□□□ -0.44
ITGB5-212ENST00000608657 CCDC61Q9Y6R9 512 aa12.31□□□□□ -0.44
ITGB5-212ENST00000608657 AKAP12Q02952 1782 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 BRINP3Q76B58 766 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 ORAI2Q96SN7 254 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 PHF8Q9UPP1 1060 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 KIF7Q2M1P5 1343 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 NINLQ9Y2I6 1382 aa12.3□□□□□ -0.44
ITGB5-212ENST00000608657 C11orf95C9JLR9 678 aaPredicted RBP12.29□□□□□ -0.44
ITGB5-212ENST00000608657 PMFBP1Q8TBY8 1022 aa12.29□□□□□ -0.44
ITGB5-212ENST00000608657 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
ITGB5-212ENST00000608657 PHLPP1O60346 1717 aa12.28□□□□□ -0.44
ITGB5-212ENST00000608657 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
ITGB5-212ENST00000608657 NGDNQ8NEJ9 315 aaKnown RBP12.28□□□□□ -0.44
ITGB5-212ENST00000608657 CABP1Q9NZU7 370 aa12.28□□□□□ -0.44
ITGB5-212ENST00000608657 AHDC1Q5TGY3 1603 aaPredicted RBP12.28□□□□□ -0.44
ITGB5-212ENST00000608657 PLEKHG3A1L390 1219 aa12.27□□□□□ -0.45
ITGB5-212ENST00000608657 WASHC2AQ641Q2 1341 aa12.27□□□□□ -0.45
ITGB5-212ENST00000608657 ACEP12821 1306 aa12.26□□□□□ -0.45
ITGB5-212ENST00000608657 NPHP3Q7Z494 1330 aa12.26□□□□□ -0.45
ITGB5-212ENST00000608657 POLR3AO14802 1390 aaPredicted RBP12.26□□□□□ -0.45
ITGB5-212ENST00000608657 HDGFL2Q7Z4V5 671 aaPredicted RBP12.25□□□□□ -0.45
ITGB5-212ENST00000608657 SLC12A5Q9H2X9 1139 aa12.25□□□□□ -0.45
ITGB5-212ENST00000608657 TERF2IPQ9NYB0 399 aa12.25□□□□□ -0.45
ITGB5-212ENST00000608657 CD163L1Q9NR16 1453 aa12.25□□□□□ -0.45
ITGB5-212ENST00000608657 NRKQ7Z2Y5 1582 aa12.25□□□□□ -0.45
ITGB5-212ENST00000608657 TRPM3Q9HCF6 1732 aaPredicted RBP12.25□□□□□ -0.45
ITGB5-212ENST00000608657 A0A1W2PP64 1363 aa12.24□□□□□ -0.45
ITGB5-212ENST00000608657 FOXO3O43524 673 aa12.24□□□□□ -0.45
ITGB5-212ENST00000608657 PSME1Q06323 249 aa12.24□□□□□ -0.45
ITGB5-212ENST00000608657 COL16A1Q07092 1604 aaPredicted RBP12.24□□□□□ -0.45
ITGB5-212ENST00000608657 KTN1Q86UP2 1357 aaKnown RBP12.24□□□□□ -0.45
ITGB5-212ENST00000608657 ANKRD36BQ8N2N9 1353 aa12.24□□□□□ -0.45
ITGB5-212ENST00000608657 PXDNQ92626 1479 aa12.24□□□□□ -0.45
ITGB5-212ENST00000608657 USP6P35125 1406 aa12.23□□□□□ -0.45
ITGB5-212ENST00000608657 CPSF1Q10570 1443 aaKnown RBP12.23□□□□□ -0.45
ITGB5-212ENST00000608657 FBXO41Q8TF61 875 aa12.23□□□□□ -0.45
ITGB5-212ENST00000608657 DDX17Q92841 729 aaKnown RBP12.23□□□□□ -0.45
ITGB5-212ENST00000608657 ZNF692Q9BU19 519 aaPredicted RBP12.23□□□□□ -0.45
ITGB5-212ENST00000608657 XPCQ01831 940 aaPredicted RBP12.22□□□□□ -0.45
ITGB5-212ENST00000608657 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
ITGB5-212ENST00000608657 KIF20BQ96Q89 1820 aa12.22□□□□□ -0.45
ITGB5-212ENST00000608657 BRD4O60885 1362 aaPredicted RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms