RNA–Protein interactions for RNA: ENST00000608220.5

LINC00343-210, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 806 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-210ENST00000608220 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
LINC00343-210ENST00000608220 ZNF598Q86UK7 904 aaKnown RBP8.53□□□□□ -1.04
LINC00343-210ENST00000608220 MSS51Q4VC12 460 aa8.52□□□□□ -1.05
LINC00343-210ENST00000608220 USB1Q9BQ65 265 aaKnown RBP8.52□□□□□ -1.05
LINC00343-210ENST00000608220 SPIRE2Q8WWL2 714 aa8.5□□□□□ -1.05
LINC00343-210ENST00000608220 SYMPKQ92797 1274 aaKnown RBP8.5□□□□□ -1.05
LINC00343-210ENST00000608220 BCANQ96GW7 911 aa8.5□□□□□ -1.05
LINC00343-210ENST00000608220 BEGAINQ9BUH8 593 aa8.5□□□□□ -1.05
LINC00343-210ENST00000608220 SLC24A3Q9HC58 644 aa8.5□□□□□ -1.05
LINC00343-210ENST00000608220 ZBTB24O43167 697 aaPredicted RBP8.49□□□□□ -1.05
LINC00343-210ENST00000608220 FDX1P10109 184 aa8.49□□□□□ -1.05
LINC00343-210ENST00000608220 PARP9Q8IXQ6 854 aa8.49□□□□□ -1.05
LINC00343-210ENST00000608220 C6orf229H3BNL8 230 aa8.48□□□□□ -1.05
LINC00343-210ENST00000608220 TNFRSF10AO00220 468 aa8.48□□□□□ -1.05
LINC00343-210ENST00000608220 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
LINC00343-210ENST00000608220 RPIAP49247 311 aa8.48□□□□□ -1.05
LINC00343-210ENST00000608220 FOXC1Q12948 553 aa8.48□□□□□ -1.05
LINC00343-210ENST00000608220 CCDC24Q8N4L8 307 aa8.48□□□□□ -1.05
LINC00343-210ENST00000608220 NDUFV2P19404 249 aa8.47□□□□□ -1.05
LINC00343-210ENST00000608220 TRAF7Q6Q0C0 670 aa8.47□□□□□ -1.05
LINC00343-210ENST00000608220 TRIM67Q6ZTA4 783 aa8.47□□□□□ -1.05
LINC00343-210ENST00000608220 RB1CC1Q8TDY2 1594 aa8.47□□□□□ -1.05
LINC00343-210ENST00000608220 MOXD2PA6NHM9 499 aa8.46□□□□□ -1.06
LINC00343-210ENST00000608220 MMP16P51512 607 aa8.46□□□□□ -1.06
LINC00343-210ENST00000608220 DXOO77932 396 aaKnown RBP8.45□□□□□ -1.06
LINC00343-210ENST00000608220 MS4A1P11836 297 aa8.45□□□□□ -1.06
LINC00343-210ENST00000608220 PDE4DQ08499 809 aa8.45□□□□□ -1.06
LINC00343-210ENST00000608220 PCDHGC3Q9UN70 934 aa8.45□□□□□ -1.06
LINC00343-210ENST00000608220 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
LINC00343-210ENST00000608220 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
LINC00343-210ENST00000608220 GDF9O60383 454 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 JUNDP17535 347 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PRR20EP86478 221 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PRR20CP86479 221 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PRR20DP86480 221 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PRR20BP86481 221 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PRR20AP86496 221 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 PKDCCQ504Y2 493 aa8.43□□□□□ -1.06
LINC00343-210ENST00000608220 FAM187AA6NFU0 413 aa8.42□□□□□ -1.06
LINC00343-210ENST00000608220 LCE2BO14633 110 aa8.41□□□□□ -1.06
LINC00343-210ENST00000608220 PKD2L1Q9P0L9 805 aa8.41□□□□□ -1.06
LINC00343-210ENST00000608220 TRIM32Q13049 653 aa8.4□□□□□ -1.06
LINC00343-210ENST00000608220 NACADO15069 1562 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 DGAT1O75907 488 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 MTMR2Q13614 643 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 RSBN1LQ6PCB5 846 aaPredicted RBP8.39□□□□□ -1.07
LINC00343-210ENST00000608220 CYP4X1Q8N118 509 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 PRR7Q8TB68 274 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 NUDT12Q9BQG2 462 aa8.39□□□□□ -1.07
LINC00343-210ENST00000608220 CSPP1Q1MSJ5 1256 aa8.38□□□□□ -1.07
LINC00343-210ENST00000608220 RIC3Q7Z5B4 369 aa8.38□□□□□ -1.07
LINC00343-210ENST00000608220 SPDYE5A6NIY4 337 aa8.37□□□□□ -1.07
LINC00343-210ENST00000608220 PCDHB15Q9Y5E8 787 aa8.37□□□□□ -1.07
LINC00343-210ENST00000608220 TTC24A2A3L6 582 aaPredicted RBP8.36□□□□□ -1.07
LINC00343-210ENST00000608220 SPTLC1O15269 473 aa8.36□□□□□ -1.07
LINC00343-210ENST00000608220 CCNYL3P0C7X3 344 aa8.35□□□□□ -1.07
LINC00343-210ENST00000608220 GJA5P36382 358 aa8.35□□□□□ -1.07
LINC00343-210ENST00000608220 WNT7AO00755 349 aa8.34□□□□□ -1.07
LINC00343-210ENST00000608220 MYT1Q01538 1121 aa8.34□□□□□ -1.07
LINC00343-210ENST00000608220 PTCRAQ6ISU1 281 aaPredicted RBP8.34□□□□□ -1.07
LINC00343-210ENST00000608220 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
LINC00343-210ENST00000608220 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
LINC00343-210ENST00000608220 NUTM2BA6NNL0 878 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-210ENST00000608220 NUTM2EB1AL46 878 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-210ENST00000608220 HRCP23327 699 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 PTPRNQ16849 979 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 NUTM2DQ5VT03 806 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-210ENST00000608220 MYSM1Q5VVJ2 828 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 NUTM2AQ8IVF1 878 aaPredicted RBP8.33□□□□□ -1.08
LINC00343-210ENST00000608220 TSC1Q92574 1164 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 MRGPRX2Q96LB1 330 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 TOR4AQ9NXH8 423 aa8.33□□□□□ -1.08
LINC00343-210ENST00000608220 RC3H1Q5TC82 1133 aaKnown RBP8.32□□□□□ -1.08
LINC00343-210ENST00000608220 ZNF787Q6DD87 383 aa8.32□□□□□ -1.08
LINC00343-210ENST00000608220 LIMD1Q9UGP4 676 aa8.32□□□□□ -1.08
LINC00343-210ENST00000608220 CFAP99D6REC4 459 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 CTHP32929 405 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 WNT7BP56706 349 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 SKOR1P84550 965 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 SNIP1Q8TAD8 396 aaKnown RBP8.31□□□□□ -1.08
LINC00343-210ENST00000608220 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 GPBP1L1Q9HC44 474 aaPredicted RBP8.31□□□□□ -1.08
LINC00343-210ENST00000608220 POLR3EQ9NVU0 708 aa8.31□□□□□ -1.08
LINC00343-210ENST00000608220 ATP1B4Q9UN42 357 aaPredicted RBP8.31□□□□□ -1.08
LINC00343-210ENST00000608220 ST8SIA5O15466 376 aa8.3□□□□□ -1.08
LINC00343-210ENST00000608220 KCNH2Q12809 1159 aa8.3□□□□□ -1.08
LINC00343-210ENST00000608220 PRPF38BQ5VTL8 546 aaKnown RBP8.3□□□□□ -1.08
LINC00343-210ENST00000608220 DESI1Q6ICB0 168 aa8.3□□□□□ -1.08
LINC00343-210ENST00000608220 UNC93B1Q9H1C4 597 aa8.3□□□□□ -1.08
LINC00343-210ENST00000608220 EVA1BQ9NVM1 165 aa8.3□□□□□ -1.08
LINC00343-210ENST00000608220 CLK2P49760 499 aaKnown RBP8.29□□□□□ -1.08
LINC00343-210ENST00000608220 QPCTQ16769 361 aa8.29□□□□□ -1.08
LINC00343-210ENST00000608220 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
LINC00343-210ENST00000608220 KDM4CQ9H3R0 1056 aa8.29□□□□□ -1.08
LINC00343-210ENST00000608220 MYO15BQ96JP2 1530 aa8.29□□□□□ -1.08
LINC00343-210ENST00000608220 EHBP1Q8NDI1 1231 aa8.28□□□□□ -1.08
LINC00343-210ENST00000608220 J3QL48 77 aa8.27□□□□□ -1.09
LINC00343-210ENST00000608220 LYPD8Q6UX82 237 aa8.27□□□□□ -1.09
LINC00343-210ENST00000608220 BAP1Q92560 729 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms